Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016504A_C01 KMC016504A_c01
(561 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO15358.1|AF242356_1 kinesin related protein [Lycopersicon e... 184 6e-46
ref|NP_200363.1| putative protein; protein id: At5g55520.1 [Arab... 165 3e-40
ref|NP_194396.1| putative protein; protein id: At4g26660.1 [Arab... 165 3e-40
ref|NP_188650.1| kinesin-like protein; protein id: At3g20150.1 [... 139 3e-32
dbj|BAB01875.1| contains similarity to kinesin~gene_id:MAL21.18 ... 139 3e-32
>gb|AAO15358.1|AF242356_1 kinesin related protein [Lycopersicon esculentum]
Length = 1191
Score = 184 bits (467), Expect = 6e-46
Identities = 95/146 (65%), Positives = 120/146 (82%), Gaps = 4/146 (2%)
Frame = -2
Query: 560 SLSAELSVLRVERERESKLLKKENQNLKIQLRDTAEAVQAAGELLVRLREAEQAAAFAEE 381
SL+AELS LRVERERE ++LKKEN++L++QL+DTAEAV AAGELLVRLREAE+ A+ AEE
Sbjct: 1045 SLAAELSALRVEREREREMLKKENKSLRVQLKDTAEAVHAAGELLVRLREAEETASLAEE 1104
Query: 380 NFANSQEDNENLKMKMEKLTRKHKTEIDTMKQYLTESKLPESALQ-PLYGQDPNVTHNSA 204
NF S+E+NE LK ++EKL RKHK E+ TMKQYL ES+LPE+AL+ P+Y QD +V +N
Sbjct: 1105 NFTQSKEENERLKKQIEKLKRKHKMEMITMKQYLAESRLPEAALRPPIYRQDSDVANNDN 1164
Query: 203 TSS---DTYYDDQAWRAEFGAIYQEY 135
++ Y DDQ+WRAEFGAIYQE+
Sbjct: 1165 NNTIQHSEYDDDQSWRAEFGAIYQEH 1190
>ref|NP_200363.1| putative protein; protein id: At5g55520.1 [Arabidopsis thaliana]
gi|9758184|dbj|BAB08569.1|
gene_id:MTE17.24~pir||T08932~strong similarity to unknown
protein [Arabidopsis thaliana]
Length = 802
Score = 165 bits (418), Expect = 3e-40
Identities = 89/152 (58%), Positives = 110/152 (71%), Gaps = 10/152 (6%)
Frame = -2
Query: 560 SLSAELSVLRVERERESKLLKKENQNLKIQLRDTAEAVQAAGELLVRLREAEQAAAFAEE 381
+ SAEL+ +R E+E+E + LKKEN+ LKIQLRDT EAVQAAGELLVRLREAEQA +EE
Sbjct: 647 AFSAELTAIRAEKEKEREFLKKENKGLKIQLRDTVEAVQAAGELLVRLREAEQAVQSSEE 706
Query: 380 NFANSQEDNENLKMKMEKLTRKHKTEIDTMKQYLTESKLPESALQPLY---GQDPNVTHN 210
F +E+N+ LK +MEKL KHKTE+ TMKQYL ESKLP SAL+ + Q+ H
Sbjct: 707 RFGIMEEENDKLKQQMEKLKSKHKTEMSTMKQYLAESKLPGSALEAWFKENEQEEEEEHV 766
Query: 209 SAT-------SSDTYYDDQAWRAEFGAIYQEY 135
S++ S D Y DDQAWR+EFGAIYQ++
Sbjct: 767 SSSEHRTGVVSYDNYTDDQAWRSEFGAIYQDH 798
>ref|NP_194396.1| putative protein; protein id: At4g26660.1 [Arabidopsis thaliana]
gi|7487040|pir||T08932 hypothetical protein T15N24.110 -
Arabidopsis thaliana gi|4938504|emb|CAB43862.1| putative
protein [Arabidopsis thaliana] gi|7269518|emb|CAB79521.1|
putative protein [Arabidopsis thaliana]
Length = 806
Score = 165 bits (418), Expect = 3e-40
Identities = 90/150 (60%), Positives = 109/150 (72%), Gaps = 7/150 (4%)
Frame = -2
Query: 560 SLSAELSVLRVERERESKLLKKENQNLKIQLRDTAEAVQAAGELLVRLREAEQAAAFAEE 381
+ S ELS +R E+E+E +LLKKEN+NL+ QLRDTAEAVQAAGELLVRLRE+EQA +EE
Sbjct: 656 AFSDELSAIRAEKEKERELLKKENKNLRTQLRDTAEAVQAAGELLVRLRESEQALQVSEE 715
Query: 380 NFANSQEDNENLKMKMEKLTRKHKTEIDTMKQYLTESKLPESA-LQPLYGQDPNVT---- 216
F+ +E+ E LK +ME+L KHKTEI TMKQYL ESKLP SA LQP Y + +
Sbjct: 716 RFSVVEEEKERLKKQMEQLKSKHKTEIGTMKQYLAESKLPGSALLQPWYKDEEDEIEQVS 775
Query: 215 --HNSATSSDTYYDDQAWRAEFGAIYQEYY 132
A S D Y DDQAWRAEFGA YQ+++
Sbjct: 776 EHETGAVSFDDYEDDQAWRAEFGATYQDHH 805
>ref|NP_188650.1| kinesin-like protein; protein id: At3g20150.1 [Arabidopsis thaliana]
Length = 1094
Score = 139 bits (349), Expect = 3e-32
Identities = 73/108 (67%), Positives = 89/108 (81%)
Frame = -2
Query: 560 SLSAELSVLRVERERESKLLKKENQNLKIQLRDTAEAVQAAGELLVRLREAEQAAAFAEE 381
SL++ELS LRVERERE LLKKEN +LKIQLR+TAEAV AGE+LVRLREAEQ+A+ AEE
Sbjct: 976 SLASELSALRVERERERDLLKKENISLKIQLRNTAEAVHTAGEVLVRLREAEQSASAAEE 1035
Query: 380 NFANSQEDNENLKMKMEKLTRKHKTEIDTMKQYLTESKLPESALQPLY 237
F +E+NE LK KMEKL R+HK E+ T+K+ L ++ LPESALQPL+
Sbjct: 1036 KFNEVEEENEKLKKKMEKLKRRHKLEVVTIKKSLKQNTLPESALQPLH 1083
>dbj|BAB01875.1| contains similarity to kinesin~gene_id:MAL21.18 [Arabidopsis
thaliana]
Length = 1103
Score = 139 bits (349), Expect = 3e-32
Identities = 73/108 (67%), Positives = 89/108 (81%)
Frame = -2
Query: 560 SLSAELSVLRVERERESKLLKKENQNLKIQLRDTAEAVQAAGELLVRLREAEQAAAFAEE 381
SL++ELS LRVERERE LLKKEN +LKIQLR+TAEAV AGE+LVRLREAEQ+A+ AEE
Sbjct: 985 SLASELSALRVERERERDLLKKENISLKIQLRNTAEAVHTAGEVLVRLREAEQSASAAEE 1044
Query: 380 NFANSQEDNENLKMKMEKLTRKHKTEIDTMKQYLTESKLPESALQPLY 237
F +E+NE LK KMEKL R+HK E+ T+K+ L ++ LPESALQPL+
Sbjct: 1045 KFNEVEEENEKLKKKMEKLKRRHKLEVVTIKKSLKQNTLPESALQPLH 1092
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 437,046,663
Number of Sequences: 1393205
Number of extensions: 8646204
Number of successful extensions: 35633
Number of sequences better than 10.0: 466
Number of HSP's better than 10.0 without gapping: 32327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35375
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20095422690
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
