Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016499A_C01 KMC016499A_c01
(525 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD03456.1| contains similarity to Ipomoea nil leaf protein (... 59 3e-08
ref|NP_192388.1| hypothetical protein; protein id: At4g04790.1 [... 59 3e-08
ref|NP_193919.1| putative protein; protein id: At4g21880.1 [Arab... 59 3e-08
ref|NP_648715.1| CG17177-PA [Drosophila melanogaster] gi|2309347... 35 0.54
dbj|BAB84979.1| FLJ00226 protein [Homo sapiens] 33 2.7
>gb|AAD03456.1| contains similarity to Ipomoea nil leaf protein (GB: D85101)
[Arabidopsis thaliana]
Length = 760
Score = 59.3 bits (142), Expect = 3e-08
Identities = 35/101 (34%), Positives = 57/101 (55%)
Frame = -1
Query: 519 WNDACCRIILYCIWNEHLSSAIDLCKLLKEKLESDEKFMEVLFDKVFSLIERSESNHLNT 340
W D R+IL+ + N+ S +DL K K +L +E FD+VF I +E + ++
Sbjct: 567 WIDGFFRMILFAVRNKKSSDIVDLLKRNKVRLLKKGIPVEAHFDEVFWAIAETEPSKVHL 626
Query: 339 CLHLLSEIRDKIGTLPSQKCYDSLFCAPADALDSE*GSLMY 217
+ LL ++D++G +PS+KC D L A +A D E G L++
Sbjct: 627 GMDLLRFMKDELGFVPSRKCLDFLLHACVNAKDLEHGLLVW 667
>ref|NP_192388.1| hypothetical protein; protein id: At4g04790.1 [Arabidopsis
thaliana] gi|25407292|pir||C85060 hypothetical protein
AT4g04790 [imported] - Arabidopsis thaliana
gi|7267237|emb|CAB80844.1| hypothetical protein
[Arabidopsis thaliana]
Length = 731
Score = 59.3 bits (142), Expect = 3e-08
Identities = 35/101 (34%), Positives = 57/101 (55%)
Frame = -1
Query: 519 WNDACCRIILYCIWNEHLSSAIDLCKLLKEKLESDEKFMEVLFDKVFSLIERSESNHLNT 340
W D R+IL+ + N+ S +DL K K +L +E FD+VF I +E + ++
Sbjct: 538 WIDGFFRMILFAVRNKKSSDIVDLLKRNKVRLLKKGIPVEAHFDEVFWAIAETEPSKVHL 597
Query: 339 CLHLLSEIRDKIGTLPSQKCYDSLFCAPADALDSE*GSLMY 217
+ LL ++D++G +PS+KC D L A +A D E G L++
Sbjct: 598 GMDLLRFMKDELGFVPSRKCLDFLLHACVNAKDLEHGLLVW 638
>ref|NP_193919.1| putative protein; protein id: At4g21880.1 [Arabidopsis thaliana]
gi|7487835|pir||T05470 hypothetical protein T8O5.90 -
Arabidopsis thaliana gi|2894566|emb|CAA17155.1| putative
protein [Arabidopsis thaliana]
gi|7269033|emb|CAB79143.1| putative protein [Arabidopsis
thaliana]
Length = 859
Score = 59.3 bits (142), Expect = 3e-08
Identities = 32/101 (31%), Positives = 56/101 (54%)
Frame = -1
Query: 519 WNDACCRIILYCIWNEHLSSAIDLCKLLKEKLESDEKFMEVLFDKVFSLIERSESNHLNT 340
W D +II++ + N SS +DL + K L D+ +E F++VF I +ES+ +
Sbjct: 649 WIDGFFKIIVFAVRNNRSSSILDLLEQTKNHLSKDDVGVEYWFEEVFKSIAETESSDVKV 708
Query: 339 CLHLLSEIRDKIGTLPSQKCYDSLFCAPADALDSE*GSLMY 217
L L+S +++++ PS+KC D L A +A D + L++
Sbjct: 709 GLDLVSFMKEELELCPSRKCLDFLLHACVNAKDKQSALLVW 749
>ref|NP_648715.1| CG17177-PA [Drosophila melanogaster] gi|23093470|gb|AAF49717.2|
CG17177-PA [Drosophila melanogaster]
Length = 1333
Score = 35.0 bits (79), Expect = 0.54
Identities = 29/90 (32%), Positives = 45/90 (49%), Gaps = 7/90 (7%)
Frame = -1
Query: 438 LKEKLESDEKFMEVLFDKVFSLIERSESNHLNTCLH-------LLSEIRDKIGTLPSQKC 280
L++ E+ EK E LF K+ L S +LN L+ +L+ I+ K+G L Q
Sbjct: 1007 LEKNAETLEKLAETLFKKLGVLDIHKPSINLNVTLNTCQENNEMLTNIQSKMGYLLKQNS 1066
Query: 279 YDSLFCAPADALDSE*GSLMYM*CSSSNLL 190
D +P D+ +S+ SL+ CSS+ L
Sbjct: 1067 KDCFEGSPTDSKNSK--SLIIKTCSSNEKL 1094
>dbj|BAB84979.1| FLJ00226 protein [Homo sapiens]
Length = 1046
Score = 32.7 bits (73), Expect = 2.7
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
Frame = -1
Query: 477 NEHLSSAIDLCKLLKEKLESDEKFMEVLFDKVFSL---------IERSESNHLNTCLHLL 325
+E + A DLC+L+KEKLE +E L ++ L +E + S N C L
Sbjct: 72 DEEIKRAEDLCRLMKEKLEEEENLTRELKSEIERLQKRMAELEKLEEAFSRSKNDCTQLC 131
Query: 324 SEIRDK 307
+ ++
Sbjct: 132 LSLNEE 137
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 398,347,617
Number of Sequences: 1393205
Number of extensions: 7642084
Number of successful extensions: 17806
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17801
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17019769648
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
