Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016472A_C01 KMC016472A_c01
(568 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC23099.1| phototropin [Vicia faba] 120 3e-27
gb|AAB41023.2| phototropin-like protein PsPK4 [Pisum sativum] 114 1e-25
gb|AAM15725.1| phototropin 1 [Pisum sativum] 114 1e-25
pir||T06809 protein kinase homolog - garden pea 114 1e-25
pir||S42866 serine/threonine protein kinase (EC 2.7.1.-), nonpho... 97 1e-19
>dbj|BAC23099.1| phototropin [Vicia faba]
Length = 970
Score = 120 bits (300), Expect(2) = 3e-27
Identities = 53/68 (77%), Positives = 60/68 (87%)
Frame = -2
Query: 567 HAKQLIYRLLHRDPKNRLGSQEGANEIKRHPFFRGVDWALIRCMKPPELDAPLLQETEED 388
H KQLIY LLHRDPKNRLGS EGANEIK HPFF+ V+WAL+RCMKPPELDAP+L + +E
Sbjct: 893 HGKQLIYWLLHRDPKNRLGSLEGANEIKNHPFFKNVNWALVRCMKPPELDAPILLDNDEK 952
Query: 387 KEAKDVDP 364
KEAKD+DP
Sbjct: 953 KEAKDIDP 960
Score = 23.5 bits (49), Expect(2) = 3e-27
Identities = 10/18 (55%), Positives = 13/18 (71%)
Frame = -3
Query: 386 KKPKM*TPGLEDLQENFF 333
K+ K PGL+DLQ+N F
Sbjct: 953 KEAKDIDPGLDDLQKNIF 970
>gb|AAB41023.2| phototropin-like protein PsPK4 [Pisum sativum]
Length = 976
Score = 114 bits (285), Expect(2) = 1e-25
Identities = 49/68 (72%), Positives = 58/68 (85%)
Frame = -2
Query: 567 HAKQLIYRLLHRDPKNRLGSQEGANEIKRHPFFRGVDWALIRCMKPPELDAPLLQETEED 388
H KQLIY LLHRDPKNRLGS EGANEIK HPFF+ ++WAL+RC KPPELD P+L + +E
Sbjct: 899 HGKQLIYWLLHRDPKNRLGSLEGANEIKNHPFFKNINWALVRCTKPPELDGPILLDNDEK 958
Query: 387 KEAKDVDP 364
KEAK++DP
Sbjct: 959 KEAKEIDP 966
Score = 23.9 bits (50), Expect(2) = 1e-25
Identities = 10/18 (55%), Positives = 13/18 (71%)
Frame = -3
Query: 386 KKPKM*TPGLEDLQENFF 333
K+ K PGL+DLQ+N F
Sbjct: 959 KEAKEIDPGLDDLQKNIF 976
>gb|AAM15725.1| phototropin 1 [Pisum sativum]
Length = 976
Score = 114 bits (285), Expect(2) = 1e-25
Identities = 49/68 (72%), Positives = 58/68 (85%)
Frame = -2
Query: 567 HAKQLIYRLLHRDPKNRLGSQEGANEIKRHPFFRGVDWALIRCMKPPELDAPLLQETEED 388
H KQLIY LLHRDPKNRLGS EGANEIK HPFF+ ++WAL+RC KPPELD P+L + +E
Sbjct: 899 HGKQLIYWLLHRDPKNRLGSLEGANEIKNHPFFKNINWALVRCTKPPELDGPILLDNDEK 958
Query: 387 KEAKDVDP 364
KEAK++DP
Sbjct: 959 KEAKEIDP 966
Score = 23.9 bits (50), Expect(2) = 1e-25
Identities = 10/18 (55%), Positives = 13/18 (71%)
Frame = -3
Query: 386 KKPKM*TPGLEDLQENFF 333
K+ K PGL+DLQ+N F
Sbjct: 959 KEAKEIDPGLDDLQKNIF 976
>pir||T06809 protein kinase homolog - garden pea
Length = 443
Score = 114 bits (285), Expect(2) = 1e-25
Identities = 49/68 (72%), Positives = 58/68 (85%)
Frame = -2
Query: 567 HAKQLIYRLLHRDPKNRLGSQEGANEIKRHPFFRGVDWALIRCMKPPELDAPLLQETEED 388
H KQLIY LLHRDPKNRLGS EGANEIK HPFF+ ++WAL+RC KPPELD P+L + +E
Sbjct: 366 HGKQLIYWLLHRDPKNRLGSLEGANEIKNHPFFKNINWALVRCTKPPELDGPILLDNDEK 425
Query: 387 KEAKDVDP 364
KEAK++DP
Sbjct: 426 KEAKEIDP 433
Score = 23.9 bits (50), Expect(2) = 1e-25
Identities = 10/18 (55%), Positives = 13/18 (71%)
Frame = -3
Query: 386 KKPKM*TPGLEDLQENFF 333
K+ K PGL+DLQ+N F
Sbjct: 426 KEAKEIDPGLDDLQKNIF 443
>pir||S42866 serine/threonine protein kinase (EC 2.7.1.-), nonphototropic
hypocotyl protein 1-like [similarity] - common ice plant
(fragment) gi|457693|emb|CAA82994.1| protein kinase
[Mesembryanthemum crystallinum]
Length = 572
Score = 97.4 bits (241), Expect = 1e-19
Identities = 47/67 (70%), Positives = 55/67 (81%)
Frame = -2
Query: 564 AKQLIYRLLHRDPKNRLGSQEGANEIKRHPFFRGVDWALIRCMKPPELDAPLLQETEEDK 385
A QLIY+LL +DPK+RLG+ EGANEIKRHPFFRG +WAL+RCMKPP LDAP L + +K
Sbjct: 497 ASQLIYQLLQKDPKDRLGACEGANEIKRHPFFRGANWALVRCMKPPVLDAPPLL-GDPEK 555
Query: 384 EAKDVDP 364
EA VDP
Sbjct: 556 EANIVDP 562
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 506,103,783
Number of Sequences: 1393205
Number of extensions: 10773328
Number of successful extensions: 33100
Number of sequences better than 10.0: 831
Number of HSP's better than 10.0 without gapping: 31165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32666
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20669577624
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
