Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016375A_C01 KMC016375A_c01
(495 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_172953.1| serine carboxypeptidase precursor, putative; pr... 64 1e-09
dbj|BAA94235.1| unnamed protein product [Oryza sativa (japonica ... 58 5e-08
dbj|BAB19126.1| carboxypeptidase precursor-like protein [Oryza s... 52 3e-06
pir||JC1380 carboxypeptidase C (EC 3.4.16.5) precursor - yeast (... 43 0.002
sp|P30574|CBPY_CANAL Carboxypeptidase Y precursor (Carboxypeptid... 43 0.002
>ref|NP_172953.1| serine carboxypeptidase precursor, putative; protein id:
At1g15000.1, supported by cDNA: gi_19715606 [Arabidopsis
thaliana] gi|25513545|pir||D86283 T15D22.4 protein -
Arabidopsis thaliana gi|6899645|gb|AAF31022.1|AC012189_4
Contains similarity to serine-type carboxypeptidase like
protein from Arabidopsis thaliana gi|4678929 and
contains two Serine carboxypeptidase domains PF|00450
gi|19715607|gb|AAL91626.1| At1g15000/T15D22_7
[Arabidopsis thaliana] gi|27363234|gb|AAO11536.1|
At1g15000/T15D22_7 [Arabidopsis thaliana]
Length = 444
Score = 63.5 bits (153), Expect = 1e-09
Identities = 31/66 (46%), Positives = 43/66 (64%), Gaps = 1/66 (1%)
Frame = -3
Query: 493 KIWK-VNGELAGYVQNWKSLTNAVVLGAAHLLPTDQAVNSQVMIEDWVLERGSFKSVVQQ 317
++WK +G +AGYVQ W +L + V GA H +PTD+AVNS+ MIE WVL +G F +
Sbjct: 374 RVWKDEDGVVAGYVQRWGNLCHVAVTGAGHFVPTDKAVNSRDMIEGWVLGKGLFGGKDVK 433
Query: 316 EKVSGS 299
+ S S
Sbjct: 434 QTTSSS 439
>dbj|BAA94235.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
gi|14164484|dbj|BAB55735.1| OSJNBa0038J17.27 [Oryza
sativa (japonica cultivar-group)]
Length = 429
Score = 58.2 bits (139), Expect = 5e-08
Identities = 26/52 (50%), Positives = 35/52 (67%)
Frame = -3
Query: 490 IWKVNGELAGYVQNWKSLTNAVVLGAAHLLPTDQAVNSQVMIEDWVLERGSF 335
+W++ ELAGYVQ L++ +V GA HL+P D +Q MIEDWVL+ G F
Sbjct: 368 VWRIGEELAGYVQRSGPLSHVIVDGAGHLVPADNGRVAQEMIEDWVLQAGLF 419
>dbj|BAB19126.1| carboxypeptidase precursor-like protein [Oryza sativa (japonica
cultivar-group)] gi|20160520|dbj|BAB89470.1|
carboxypeptidase precursor-like protein [Oryza sativa
(japonica cultivar-group)]
Length = 452
Score = 52.4 bits (124), Expect = 3e-06
Identities = 25/53 (47%), Positives = 34/53 (63%), Gaps = 1/53 (1%)
Frame = -3
Query: 490 IWKVNGE-LAGYVQNWKSLTNAVVLGAAHLLPTDQAVNSQVMIEDWVLERGSF 335
+W++ E LAGYVQ +L NAV++GA H+ D +Q MIE WVL+ G F
Sbjct: 388 VWRLGDEQLAGYVQRSGALANAVIVGAGHMAAGDNRPAAQAMIEGWVLQTGPF 440
>pir||JC1380 carboxypeptidase C (EC 3.4.16.5) precursor - yeast (Candida
albicans)
Length = 542
Score = 42.7 bits (99), Expect = 0.002
Identities = 19/47 (40%), Positives = 26/47 (54%)
Frame = -3
Query: 493 KIWKVNGELAGYVQNWKSLTNAVVLGAAHLLPTDQAVNSQVMIEDWV 353
K WKV AG V+N+K T V G H++P DQ N+ M+ W+
Sbjct: 490 KSWKVGKNAAGEVKNYKHFTFLRVFGGGHMVPYDQPENALDMVNRWI 536
>sp|P30574|CBPY_CANAL Carboxypeptidase Y precursor (Carboxypeptidase YSCY)
gi|7597001|gb|AAA34326.2| carboxypeptidase Y precursor
[Candida albicans]
Length = 542
Score = 42.7 bits (99), Expect = 0.002
Identities = 19/47 (40%), Positives = 26/47 (54%)
Frame = -3
Query: 493 KIWKVNGELAGYVQNWKSLTNAVVLGAAHLLPTDQAVNSQVMIEDWV 353
K WKV AG V+N+K T V G H++P DQ N+ M+ W+
Sbjct: 490 KSWKVGKNAAGEVKNYKHFTFLRVFGGGHMVPYDQPENALDMVNRWI 536
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 396,651,804
Number of Sequences: 1393205
Number of extensions: 7979341
Number of successful extensions: 24625
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 24046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24618
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14493193850
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
