Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016187A_C01 KMC016187A_c01
(560 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O24542|AX2D_PHAAU Auxin-induced protein 22D (Indole-3-acetic ... 157 8e-38
sp|O24543|AX2E_PHAAU Auxin-induced protein 22E (Indole-3-acetic ... 154 7e-37
gb|AAD32145.1|AF123507_1 Nt-iaa4.5 deduced protein [Nicotiana ta... 145 3e-34
gb|AAD32144.1|AF123506_1 Nt-iaa4.3 deduced protein [Nicotiana ta... 145 4e-34
emb|CAC84712.1| aux/IAA protein [Populus tremula x Populus tremu... 141 5e-33
>sp|O24542|AX2D_PHAAU Auxin-induced protein 22D (Indole-3-acetic acid induced protein
ARG13) gi|7442239|pir||T10884 auxin-induced protein
Aux22d - mung bean gi|2224731|dbj|BAA20848.1| Aux22d
[Vigna radiata]
Length = 193
Score = 157 bits (397), Expect = 8e-38
Identities = 72/79 (91%), Positives = 75/79 (94%)
Frame = -3
Query: 558 LKVYKSYPELLKXLENMFKCTFGEYSEREGYNGSEYVPTYENKDGDWMLVGDVPWDMFMS 379
LKVYKSYPELLK LENMFKC FGEYSEREGYNGSEY PTYE+KDGDWMLVGDVPW+MF+S
Sbjct: 115 LKVYKSYPELLKALENMFKCIFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVS 174
Query: 378 SCKRLRIMKGSEAKGLGYF 322
SCKRLRIMKGSEAKGLG F
Sbjct: 175 SCKRLRIMKGSEAKGLGCF 193
>sp|O24543|AX2E_PHAAU Auxin-induced protein 22E (Indole-3-acetic acid induced protein
ARG14) gi|7442240|pir||T10885 auxin-induced protein
Aux22e - mung bean gi|2224733|dbj|BAA20849.1| Aux22e
[Vigna radiata]
Length = 203
Score = 154 bits (389), Expect = 7e-37
Identities = 69/77 (89%), Positives = 75/77 (96%)
Frame = -3
Query: 558 LKVYKSYPELLKXLENMFKCTFGEYSEREGYNGSEYVPTYENKDGDWMLVGDVPWDMFMS 379
LKVYKSYPELLK L+N+FKCTFGEYSEREGYNGSEY PTYE+KDGDWMLVGDVPW+MF+S
Sbjct: 125 LKVYKSYPELLKALQNLFKCTFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVS 184
Query: 378 SCKRLRIMKGSEAKGLG 328
SCKRLRI+KGSEAKGLG
Sbjct: 185 SCKRLRIIKGSEAKGLG 201
>gb|AAD32145.1|AF123507_1 Nt-iaa4.5 deduced protein [Nicotiana tabacum]
Length = 195
Score = 145 bits (366), Expect = 3e-34
Identities = 64/76 (84%), Positives = 71/76 (93%)
Frame = -3
Query: 558 LKVYKSYPELLKXLENMFKCTFGEYSEREGYNGSEYVPTYENKDGDWMLVGDVPWDMFMS 379
LKVY SYPELLK L+NMFKCT G Y+EREGYNGS+Y PTYE+KDGDWMLVGDVPWDMF++
Sbjct: 115 LKVYNSYPELLKALQNMFKCTIGVYTEREGYNGSDYAPTYEDKDGDWMLVGDVPWDMFLN 174
Query: 378 SCKRLRIMKGSEAKGL 331
SC+RLRIMKGSEAKGL
Sbjct: 175 SCRRLRIMKGSEAKGL 190
>gb|AAD32144.1|AF123506_1 Nt-iaa4.3 deduced protein [Nicotiana tabacum]
Length = 202
Score = 145 bits (365), Expect = 4e-34
Identities = 65/76 (85%), Positives = 71/76 (92%)
Frame = -3
Query: 558 LKVYKSYPELLKXLENMFKCTFGEYSEREGYNGSEYVPTYENKDGDWMLVGDVPWDMFMS 379
LKVYKSYPELLK L+NMFKCT G Y+EREGYNGSEY PTYE+KD DWMLVGDVPWDMF++
Sbjct: 115 LKVYKSYPELLKALQNMFKCTIGVYTEREGYNGSEYAPTYEDKDRDWMLVGDVPWDMFIN 174
Query: 378 SCKRLRIMKGSEAKGL 331
SC+RLRIMKGSEAKGL
Sbjct: 175 SCRRLRIMKGSEAKGL 190
>emb|CAC84712.1| aux/IAA protein [Populus tremula x Populus tremuloides]
Length = 204
Score = 141 bits (356), Expect = 5e-33
Identities = 65/77 (84%), Positives = 70/77 (90%)
Frame = -3
Query: 558 LKVYKSYPELLKXLENMFKCTFGEYSEREGYNGSEYVPTYENKDGDWMLVGDVPWDMFMS 379
LKVYK YPELLK LE MFK GEYSEREGYNGSE+VPTYE+KDGDWMLVGDVPWDMF++
Sbjct: 125 LKVYKGYPELLKALEEMFKSKVGEYSEREGYNGSEHVPTYEDKDGDWMLVGDVPWDMFIN 184
Query: 378 SCKRLRIMKGSEAKGLG 328
SCKRLRIMK SEA+GLG
Sbjct: 185 SCKRLRIMKESEARGLG 201
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 501,960,970
Number of Sequences: 1393205
Number of extensions: 11021115
Number of successful extensions: 29329
Number of sequences better than 10.0: 184
Number of HSP's better than 10.0 without gapping: 28534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29285
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20095422690
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
