Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016172A_C01 KMC016172A_c01
(543 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC43404.1| putative aspartyl aminopeptidase [Arabidopsis th... 173 1e-42
ref|NP_196091.1| aspartyl aminopeptidase -like protein; protein ... 173 1e-42
dbj|BAB85315.1| aspartyl aminopeptidase-like protein [Oryza sati... 161 4e-39
ref|NP_200824.1| aspartyl aminopeptidase - like protein; protein... 141 4e-33
gb|AAM61631.1| aspartyl aminopeptidase-like protein [Arabidopsis... 141 4e-33
>dbj|BAC43404.1| putative aspartyl aminopeptidase [Arabidopsis thaliana]
Length = 526
Score = 173 bits (438), Expect = 1e-42
Identities = 82/94 (87%), Positives = 89/94 (94%)
Frame = -3
Query: 541 ATNGITSFLFKEVGKIHNLPTQEFAVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHS 362
AT+GITSFLFKEV K+H+LP QEF VRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHS
Sbjct: 432 ATSGITSFLFKEVAKLHDLPIQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHS 491
Query: 361 IREICGKEDIDIAYKHFKAFYQSFSSVDKKLTVD 260
+REICG +DIDIAY+HFKAFY+SFSSVDKKL VD
Sbjct: 492 VREICGTDDIDIAYRHFKAFYRSFSSVDKKLVVD 525
>ref|NP_196091.1| aspartyl aminopeptidase -like protein; protein id: At5g04710.1
[Arabidopsis thaliana] gi|11357180|pir||T48467 aspartyl
aminopeptidase-like protein - Arabidopsis thaliana
gi|7413533|emb|CAB86013.1| aspartyl aminopeptidase-like
protein [Arabidopsis thaliana]
gi|9758446|dbj|BAB08975.1| aspartyl aminopeptidase
[Arabidopsis thaliana]
Length = 526
Score = 173 bits (438), Expect = 1e-42
Identities = 82/94 (87%), Positives = 89/94 (94%)
Frame = -3
Query: 541 ATNGITSFLFKEVGKIHNLPTQEFAVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHS 362
AT+GITSFLFKEV K+H+LP QEF VRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHS
Sbjct: 432 ATSGITSFLFKEVAKLHDLPIQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHS 491
Query: 361 IREICGKEDIDIAYKHFKAFYQSFSSVDKKLTVD 260
+REICG +DIDIAY+HFKAFY+SFSSVDKKL VD
Sbjct: 492 VREICGTDDIDIAYRHFKAFYRSFSSVDKKLVVD 525
>dbj|BAB85315.1| aspartyl aminopeptidase-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 525
Score = 161 bits (408), Expect = 4e-39
Identities = 71/94 (75%), Positives = 84/94 (88%)
Frame = -3
Query: 541 ATNGITSFLFKEVGKIHNLPTQEFAVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHS 362
AT+ +T+FLFKE+ ++HNLP QEF VRNDMGCGSTIGPILASGVGIRTVDCGI QLSMHS
Sbjct: 432 ATSAVTAFLFKEIARLHNLPVQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIPQLSMHS 491
Query: 361 IREICGKEDIDIAYKHFKAFYQSFSSVDKKLTVD 260
+RE+CGKED+D YKHFKAF++ FS +D+KL VD
Sbjct: 492 VREMCGKEDVDTTYKHFKAFFEMFSDIDRKLNVD 525
>ref|NP_200824.1| aspartyl aminopeptidase - like protein; protein id: At5g60160.1,
supported by cDNA: 126533., supported by cDNA:
gi_15010565 [Arabidopsis thaliana]
gi|8885567|dbj|BAA97497.1| aspartyl aminopeptidase
[Arabidopsis thaliana] gi|15010566|gb|AAK73942.1|
AT5g60160/f15l12_20 [Arabidopsis thaliana]
gi|22137040|gb|AAM91365.1| At5g60160/f15l12_20
[Arabidopsis thaliana]
Length = 477
Score = 141 bits (356), Expect = 4e-33
Identities = 63/95 (66%), Positives = 79/95 (82%)
Frame = -3
Query: 541 ATNGITSFLFKEVGKIHNLPTQEFAVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHS 362
ATN +TSF+F+E+ + HNLP Q+F VRNDMGCGSTIGPILAS VGIRTVD G QLSMHS
Sbjct: 383 ATNAVTSFVFREIAEKHNLPVQDFVVRNDMGCGSTIGPILASSVGIRTVDVGAPQLSMHS 442
Query: 361 IREICGKEDIDIAYKHFKAFYQSFSSVDKKLTVDI 257
IRE+C +D+ +Y+HFKAF+Q F+ +D KLT+D+
Sbjct: 443 IREMCAADDVKHSYEHFKAFFQEFTHLDAKLTIDV 477
>gb|AAM61631.1| aspartyl aminopeptidase-like protein [Arabidopsis thaliana]
Length = 477
Score = 141 bits (356), Expect = 4e-33
Identities = 63/95 (66%), Positives = 79/95 (82%)
Frame = -3
Query: 541 ATNGITSFLFKEVGKIHNLPTQEFAVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHS 362
ATN +TSF+F+E+ + HNLP Q+F VRNDMGCGSTIGPILAS VGIRTVD G QLSMHS
Sbjct: 383 ATNAVTSFVFREIAEKHNLPVQDFVVRNDMGCGSTIGPILASSVGIRTVDVGAPQLSMHS 442
Query: 361 IREICGKEDIDIAYKHFKAFYQSFSSVDKKLTVDI 257
IRE+C +D+ +Y+HFKAF+Q F+ +D KLT+D+
Sbjct: 443 IREMCAADDVKHSYEHFKAFFQEFTHLDAKLTIDV 477
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 440,458,288
Number of Sequences: 1393205
Number of extensions: 8750365
Number of successful extensions: 18205
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 17837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18203
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18750593680
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
