Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016125A_C01 KMC016125A_c01
(537 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC77929.1| similar to Nicotiana HR lesion-inducing ORF [Medi... 149 3e-35
ref|NP_199159.1| Nicotiana lesion-inducing like; protein id: At5... 118 5e-26
gb|AAM64747.1| Nicotiana lesion-inducing like [Arabidopsis thali... 118 5e-26
gb|AAN87739.1| Unknown protein [Oryza sativa (japonica cultivar-... 114 7e-25
emb|CAD39524.1| OSJNBa0027O01.12 [Oryza sativa (japonica cultiva... 109 2e-23
>gb|AAC77929.1| similar to Nicotiana HR lesion-inducing ORF [Medicago sativa]
Length = 130
Score = 149 bits (375), Expect = 3e-35
Identities = 73/90 (81%), Positives = 78/90 (86%)
Frame = -1
Query: 537 VATIIFLKGVGGILFVVGSTLGSYLLLVYLLLATPVLYDFYNYRPNKPEYSSLLNDFIQS 358
VATIIFLKGVGGILFV GST GS+LLL +L L TP+LYDFYNYRP KPEY LLN+FIQ+
Sbjct: 39 VATIIFLKGVGGILFVFGSTFGSFLLLSHLALTTPILYDFYNYRPTKPEYGLLLNEFIQN 98
Query: 357 TALFGALLFFIGMKNSIPRKQFRKKTTKTK 268
ALFGALLFFIGMKNSIPRKQ RKKT K K
Sbjct: 99 AALFGALLFFIGMKNSIPRKQLRKKTPKAK 128
>ref|NP_199159.1| Nicotiana lesion-inducing like; protein id: At5g43460.1, supported
by cDNA: 327., supported by cDNA: gi_16209637
[Arabidopsis thaliana] gi|8843899|dbj|BAA97425.1|
Nicotiana lesion-inducing like [Arabidopsis thaliana]
gi|16209638|gb|AAL14381.1| AT5g43460/MWF20_18
[Arabidopsis thaliana]
Length = 154
Score = 118 bits (295), Expect = 5e-26
Identities = 58/91 (63%), Positives = 72/91 (78%), Gaps = 1/91 (1%)
Frame = -1
Query: 537 VATIIFLKGVGGILFVVGSTLGSYLLLVYLLLATPVLYDFYNYRPNKPEYSSLLNDFIQS 358
VATII LKGVGG+LFV+G+T G+YLL YL++ P+LYDFYNY P + +S LL +F+QS
Sbjct: 62 VATIIALKGVGGLLFVIGNTFGAYLLASYLVVFGPILYDFYNYGPQERHFSLLLTEFLQS 121
Query: 357 TALFGALLFFIGMKNSIP-RKQFRKKTTKTK 268
ALFGALLFFIGMKNS P +K +K+T K K
Sbjct: 122 VALFGALLFFIGMKNSTPAKKNLKKRTPKPK 152
>gb|AAM64747.1| Nicotiana lesion-inducing like [Arabidopsis thaliana]
Length = 154
Score = 118 bits (295), Expect = 5e-26
Identities = 57/91 (62%), Positives = 72/91 (78%), Gaps = 1/91 (1%)
Frame = -1
Query: 537 VATIIFLKGVGGILFVVGSTLGSYLLLVYLLLATPVLYDFYNYRPNKPEYSSLLNDFIQS 358
VATII LKGVGG+LFV+G+ G+YLL YL++ +P+LYDFYNY P + +S LL +F+QS
Sbjct: 62 VATIIALKGVGGLLFVIGNIFGAYLLAFYLVVVSPILYDFYNYGPQERHFSLLLTEFLQS 121
Query: 357 TALFGALLFFIGMKNSIP-RKQFRKKTTKTK 268
ALFGALLFFIGMKNS P +K +K+T K K
Sbjct: 122 VALFGALLFFIGMKNSTPAKKNLKKRTPKPK 152
>gb|AAN87739.1| Unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 157
Score = 114 bits (285), Expect = 7e-25
Identities = 54/91 (59%), Positives = 69/91 (75%)
Frame = -1
Query: 537 VATIIFLKGVGGILFVVGSTLGSYLLLVYLLLATPVLYDFYNYRPNKPEYSSLLNDFIQS 358
VA I LKG+GG+LF++ S+ G+YLLL+YL TPV+YDFYNY K E+ L F Q+
Sbjct: 66 VAATIGLKGLGGLLFILSSSFGAYLLLIYLAFITPVVYDFYNYDMEKSEFVQLFMKFTQN 125
Query: 357 TALFGALLFFIGMKNSIPRKQFRKKTTKTKT 265
ALFGALLFF+GMKNSIP++Q +KK K+KT
Sbjct: 126 LALFGALLFFLGMKNSIPKRQAKKKAPKSKT 156
>emb|CAD39524.1| OSJNBa0027O01.12 [Oryza sativa (japonica cultivar-group)]
Length = 157
Score = 109 bits (272), Expect = 2e-23
Identities = 49/91 (53%), Positives = 68/91 (73%)
Frame = -1
Query: 537 VATIIFLKGVGGILFVVGSTLGSYLLLVYLLLATPVLYDFYNYRPNKPEYSSLLNDFIQS 358
+A +FLKG GG+LF++ S+ G++LLL+YL + TPV+YDFYNY ++ L F Q+
Sbjct: 66 IAATMFLKGFGGLLFIISSSFGAFLLLLYLAVITPVVYDFYNYEMESSQFVQLFVKFSQN 125
Query: 357 TALFGALLFFIGMKNSIPRKQFRKKTTKTKT 265
ALFGALLFF+GMKNSIPR+ +++ KTKT
Sbjct: 126 LALFGALLFFLGMKNSIPRRHSKRRAGKTKT 156
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 440,641,765
Number of Sequences: 1393205
Number of extensions: 8718301
Number of successful extensions: 22638
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 22035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22616
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18173652336
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
