Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015968A_C01 KMC015968A_c01
(543 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_200011.1| putative protein; protein id: At5g51980.1 [Arab... 161 5e-39
emb|CAC19847.1| zfwd1 protein [Arabidopsis thaliana] 160 9e-39
emb|CAC19848.1| zfwd2 protein [Arabidopsis thaliana] 154 5e-37
dbj|BAB03419.1| unnamed protein product [Oryza sativa (japonica ... 124 6e-28
ref|NP_198904.1| putative protein; protein id: At5g40880.1 [Arab... 117 9e-26
>ref|NP_200011.1| putative protein; protein id: At5g51980.1 [Arabidopsis thaliana]
gi|10177733|dbj|BAB11046.1| contains similarity to
myosin heavy chain kinase~gene_id:MSG15.6 [Arabidopsis
thaliana]
Length = 437
Score = 161 bits (407), Expect = 5e-39
Identities = 75/127 (59%), Positives = 96/127 (75%)
Frame = -2
Query: 539 TLNGHTGEVTSLICWSDFLLSGASDCTIKIWVATEEGPLKVTYTHTLENGVVALNGMTDA 360
TL H+ V SLICW FLLS + D T+KIW A E G L+VTYTH E+GV+AL G+ DA
Sbjct: 309 TLTDHSSVVMSLICWDQFLLSCSLDNTVKIWAAIEGGNLEVTYTHKEEHGVLALCGVHDA 368
Query: 359 EGKHVLCCSSRDHSVRLYELPPFSERGRLFARKEIRSIEVGPGGLFFTGDGTGLVMVWKW 180
E K VL C+ D+++RLY+LP F+ERG++FA++EIR+I++GPGG+FFTGDGTG V VWKW
Sbjct: 369 EAKPVLLCACNDNTLRLYDLPSFTERGKIFAKQEIRAIQIGPGGIFFTGDGTGQVKVWKW 428
Query: 179 LEETKVA 159
E A
Sbjct: 429 CTEPTAA 435
>emb|CAC19847.1| zfwd1 protein [Arabidopsis thaliana]
Length = 430
Score = 160 bits (405), Expect = 9e-39
Identities = 76/124 (61%), Positives = 94/124 (75%)
Frame = -2
Query: 539 TLNGHTGEVTSLICWSDFLLSGASDCTIKIWVATEEGPLKVTYTHTLENGVVALNGMTDA 360
TL HT V SLICW FLLS + D T+KIW ATE G L+VTYTH E GV+AL G+ DA
Sbjct: 302 TLTEHTSVVMSLICWDQFLLSCSLDNTVKIWAATEGGNLEVTYTHKEEYGVLALCGVHDA 361
Query: 359 EGKHVLCCSSRDHSVRLYELPPFSERGRLFARKEIRSIEVGPGGLFFTGDGTGLVMVWKW 180
E K VL CS D+S+ LY+LP F+ERG++ A++EIRSI++GPGG+FFTGDG+G V VWKW
Sbjct: 362 EAKPVLLCSCNDNSLHLYDLPSFTERGKILAKQEIRSIQIGPGGIFFTGDGSGQVKVWKW 421
Query: 179 LEET 168
E+
Sbjct: 422 STES 425
Score = 33.1 bits (74), Expect = 2.2
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = -2
Query: 542 MTLNGHTGEVTSLICWSDFLLSGASDCTIKIW----VATEEGPLKVTYTHTLENGVVALN 375
++LNG G+V SL+ +D L +G D +I +W + P HTL VV+L
Sbjct: 217 LSLNGPVGQVYSLVVGTDLLFAGTQDGSILVWRYNSTTSCFDPAASLLGHTL--AVVSL- 273
Query: 374 GMTDAEGKHVLCCSSRDHSVRLYEL 300
G + L + D+S++++ L
Sbjct: 274 ----YVGANRLYSGAMDNSIKVWSL 294
>emb|CAC19848.1| zfwd2 protein [Arabidopsis thaliana]
Length = 443
Score = 154 bits (390), Expect = 5e-37
Identities = 75/133 (56%), Positives = 96/133 (71%), Gaps = 6/133 (4%)
Frame = -2
Query: 539 TLNGHTGEVTSLICWSDFLLSGASDCTIKIWVATEEGPLKVTYTHTLENGVVALNGMTDA 360
TL H+ V SLICW FLLS + D T+KIW A E G L+VTYTH E+GV+AL G+ DA
Sbjct: 309 TLTDHSSVVMSLICWDQFLLSCSLDNTVKIWAAIEGGNLEVTYTHKEEHGVLALCGVHDA 368
Query: 359 EGKHVLCCSSRDHSVRLYELPP------FSERGRLFARKEIRSIEVGPGGLFFTGDGTGL 198
E K VL C+ D+++RLY+LP F+ERG++FA++EIR+I++GPGG+FFTGDGTG
Sbjct: 369 EAKPVLLCACNDNTLRLYDLPSLGLFIRFTERGKIFAKQEIRAIQIGPGGIFFTGDGTGQ 428
Query: 197 VMVWKWLEETKVA 159
V VWKW E A
Sbjct: 429 VKVWKWCTEPTAA 441
>dbj|BAB03419.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
gi|9711827|dbj|BAB07926.1| P0512G09.8 [Oryza sativa
(japonica cultivar-group)]
Length = 384
Score = 124 bits (312), Expect = 6e-28
Identities = 61/128 (47%), Positives = 86/128 (66%), Gaps = 1/128 (0%)
Frame = -2
Query: 539 TLNGHTGEVTSLICWSDFLLSGASDCTIKIWVATEEGPLKVTYTHTLENGVVALNGMTDA 360
TL+ H VTS++CW + LLS + D T+KIW A++ G L+V YTH+ E+GV L GM
Sbjct: 248 TLSEHKAAVTSVLCWDEKLLSCSLDKTVKIWAASKSGDLQVIYTHSEEHGVRTLFGMHRV 307
Query: 359 EGKHVLCCSSRDHS-VRLYELPPFSERGRLFARKEIRSIEVGPGGLFFTGDGTGLVMVWK 183
VL CS + + +RL++LP F E G+LF++KE+R+IE+ GGL FTGDG G + VW+
Sbjct: 308 GKTPVLFCSLHNSNCIRLFDLPSFDEMGKLFSKKEVRTIELAAGGLLFTGDGAGELKVWR 367
Query: 182 WLEETKVA 159
W E + A
Sbjct: 368 WAPEEEPA 375
>ref|NP_198904.1| putative protein; protein id: At5g40880.1 [Arabidopsis thaliana]
gi|10177967|dbj|BAB11350.1|
gene_id:MHK7.11~pir||T05803~similar to unknown protein
[Arabidopsis thaliana]
Length = 472
Score = 117 bits (293), Expect = 9e-26
Identities = 57/127 (44%), Positives = 80/127 (62%)
Frame = -2
Query: 542 MTLNGHTGEVTSLICWSDFLLSGASDCTIKIWVATEEGPLKVTYTHTLENGVVALNGMTD 363
MTL H G VTSL+CW L+S + D TIK+W +E LKV T E V L GM D
Sbjct: 346 MTLKQHIGTVTSLLCWDKCLISSSLDGTIKLWACSENESLKVVQTRKQELSVHTLCGMHD 405
Query: 362 AEGKHVLCCSSRDHSVRLYELPPFSERGRLFARKEIRSIEVGPGGLFFTGDGTGLVMVWK 183
AE K ++ CS ++ +V +++LP F ERG++F+ + I ++ +GPGGL F+GD +G + VW
Sbjct: 406 AEAKPIMFCSYQNGAVGIFDLPSFEERGKMFSTQTICTLTIGPGGLLFSGDKSGNLRVWS 465
Query: 182 WLEETKV 162
TKV
Sbjct: 466 LASGTKV 472
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 503,070,987
Number of Sequences: 1393205
Number of extensions: 11690253
Number of successful extensions: 50319
Number of sequences better than 10.0: 414
Number of HSP's better than 10.0 without gapping: 45951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50106
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18750593680
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
