Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015844A_C01 KMC015844A_c01
(606 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_193843.1| G10 - like protein; protein id: At4g21110.1, su... 250 1e-65
dbj|BAB63707.1| putative G10 protein [Oryza sativa (japonica cul... 249 2e-65
emb|CAB55419.1| zhb0011.1 [Oryza sativa (indica cultivar-group)] 246 2e-64
sp|P35682|G10_ORYSA G10 PROTEIN HOMOLOG gi|7489496|pir||T03790 m... 217 1e-55
gb|AAK81863.1|AF395865_1 G10 protein [Branchiostoma belcheri] 199 2e-50
>ref|NP_193843.1| G10 - like protein; protein id: At4g21110.1, supported by cDNA:
gi_15294271 [Arabidopsis thaliana]
gi|7484968|pir||T04942 G10 protein homolog F7J7.50 -
Arabidopsis thaliana gi|2911068|emb|CAA17530.1| G10-like
protein [Arabidopsis thaliana]
gi|7268908|emb|CAB79111.1| G10-like protein [Arabidopsis
thaliana] gi|15294272|gb|AAK95313.1|AF410327_1
AT4g21110/F7J7_50 [Arabidopsis thaliana]
gi|23308281|gb|AAN18110.1| At4g21110/F7J7_50
[Arabidopsis thaliana]
Length = 145
Score = 250 bits (638), Expect = 1e-65
Identities = 111/132 (84%), Positives = 122/132 (92%)
Frame = +3
Query: 174 MPKVKTNRVKYPEGWELIEPTLCELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYI 353
MPKVKTNRVKYPEGWELIEPTL EL AKMREAE D HDGKRKCETLWPIFK++HQ+SRY+
Sbjct: 1 MPKVKTNRVKYPEGWELIEPTLRELDAKMREAETDSHDGKRKCETLWPIFKVSHQRSRYV 60
Query: 354 FDLYHRRNEISKELYEFCLDQGYADRNLIAKWKKPGYERLCCLTCMQPRDHNFATTCVCR 533
+DLY+RR EISKELYEFCLDQGYADR+LIAKWKK GYERLCCL C+QPRDHN+ TTCVCR
Sbjct: 61 YDLYYRREEISKELYEFCLDQGYADRSLIAKWKKSGYERLCCLRCIQPRDHNYGTTCVCR 120
Query: 534 VPKQLKGEKVIE 569
VPK L+ EKV+E
Sbjct: 121 VPKHLREEKVVE 132
>dbj|BAB63707.1| putative G10 protein [Oryza sativa (japonica cultivar-group)]
Length = 145
Score = 249 bits (636), Expect = 2e-65
Identities = 112/132 (84%), Positives = 122/132 (91%)
Frame = +3
Query: 174 MPKVKTNRVKYPEGWELIEPTLCELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYI 353
MPK+KT+RVKYP GWELIEPT+ EL AKMREAEND HDGKRKCE LWPIF+I+HQ+SRYI
Sbjct: 1 MPKIKTSRVKYPGGWELIEPTIRELDAKMREAENDTHDGKRKCEALWPIFRISHQRSRYI 60
Query: 354 FDLYHRRNEISKELYEFCLDQGYADRNLIAKWKKPGYERLCCLTCMQPRDHNFATTCVCR 533
+DLY+RR EISKELYEFCLDQGYADRNLIAKWKKPGYERLCCL C+Q RDHNFATTCVCR
Sbjct: 61 YDLYYRRKEISKELYEFCLDQGYADRNLIAKWKKPGYERLCCLRCIQTRDHNFATTCVCR 120
Query: 534 VPKQLKGEKVIE 569
VPK L+ EKVIE
Sbjct: 121 VPKHLREEKVIE 132
>emb|CAB55419.1| zhb0011.1 [Oryza sativa (indica cultivar-group)]
Length = 888
Score = 246 bits (627), Expect = 2e-64
Identities = 110/130 (84%), Positives = 120/130 (91%)
Frame = +3
Query: 174 MPKVKTNRVKYPEGWELIEPTLCELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYI 353
MPK+KT+RVKYP GWELIEPT+ EL AKMREAEND HDGKRKCE LWPIF+I+HQ+SRYI
Sbjct: 1 MPKIKTSRVKYPGGWELIEPTIRELDAKMREAENDTHDGKRKCEALWPIFRISHQRSRYI 60
Query: 354 FDLYHRRNEISKELYEFCLDQGYADRNLIAKWKKPGYERLCCLTCMQPRDHNFATTCVCR 533
+DLY+RR EISKELYEFCLDQGYADRNLIAKWKKPGYERLCCL C+Q RDHNFATTCVCR
Sbjct: 61 YDLYYRRKEISKELYEFCLDQGYADRNLIAKWKKPGYERLCCLRCIQTRDHNFATTCVCR 120
Query: 534 VPKQLKGEKV 563
VPK L+ EKV
Sbjct: 121 VPKHLREEKV 130
>sp|P35682|G10_ORYSA G10 PROTEIN HOMOLOG gi|7489496|pir||T03790 maternal G10-like
protein - rice gi|303847|dbj|BAA02153.1| Maternal G10
like protein [Oryza sativa (japonica cultivar-group)]
Length = 143
Score = 217 bits (553), Expect(2) = 1e-55
Identities = 97/130 (74%), Positives = 112/130 (85%)
Frame = +3
Query: 174 MPKVKTNRVKYPEGWELIEPTLCELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYI 353
MPK+KT+ V WELIEPTL EL +KMREAENDPHDG+RKCE +WPIFKI HQ+SRY+
Sbjct: 1 MPKIKTSGVNI-RWWELIEPTLSELHSKMREAENDPHDGRRKCEAMWPIFKINHQRSRYL 59
Query: 354 FDLYHRRNEISKELYEFCLDQGYADRNLIAKWKKPGYERLCCLTCMQPRDHNFATTCVCR 533
+DLY+ R EIS+ELYEFCLDQG+ADRNLIAKWKK GYERLCCL C+Q RDHNFATTCVCR
Sbjct: 60 YDLYYNRKEISQELYEFCLDQGHADRNLIAKWKKQGYERLCCLRCIQTRDHNFATTCVCR 119
Query: 534 VPKQLKGEKV 563
VPK L+ + +
Sbjct: 120 VPKHLREDSI 129
Score = 21.2 bits (43), Expect(2) = 1e-55
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 572 VHCGCKAVQVG 604
VHCGCK G
Sbjct: 132 VHCGCKGCASG 142
>gb|AAK81863.1|AF395865_1 G10 protein [Branchiostoma belcheri]
Length = 144
Score = 199 bits (506), Expect = 2e-50
Identities = 91/133 (68%), Positives = 108/133 (80%), Gaps = 1/133 (0%)
Frame = +3
Query: 174 MPKVKTNRVKYPEGWELIEPTLCELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYI 353
MPKV+ +R PEGWELIEPTL EL KMREAE +PH+GKRK E LWPIFKI HQKSRYI
Sbjct: 1 MPKVRRSRKPPPEGWELIEPTLDELDQKMREAETEPHEGKRKVEALWPIFKIHHQKSRYI 60
Query: 354 FDLYHRRNEISKELYEFCLDQGYADRNLIAKWKKPGYERLCCLTCMQPRDHNFATTCVCR 533
FDL++RR IS+ELYE+CL +G AD+NLIAKWKK GYE LCCL C+Q RD NF T C+CR
Sbjct: 61 FDLFYRRKAISRELYEYCLKEGIADKNLIAKWKKQGYENLCCLRCIQTRDTNFGTNCICR 120
Query: 534 VPK-QLKGEKVIE 569
VPK +L+ +++E
Sbjct: 121 VPKSKLEEGRIVE 133
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 535,244,452
Number of Sequences: 1393205
Number of extensions: 11605747
Number of successful extensions: 36534
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 33221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36282
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23997478008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
