Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015783A_C01 KMC015783A_c01
(480 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC65034.1| B1015H11.33 [Oryza sativa (japonica cultivar-gro... 142 2e-33
ref|NP_567795.1| putative protein; protein id: At4g28030.1, supp... 135 3e-31
gb|AAM61296.1| unknown [Arabidopsis thaliana] 135 3e-31
ref|NP_440447.1| unknown protein [Synechocystis sp. PCC 6803] gi... 64 1e-09
gb|ZP_00108443.1| hypothetical protein [Nostoc punctiforme] 57 8e-08
>dbj|BAC65034.1| B1015H11.33 [Oryza sativa (japonica cultivar-group)]
Length = 291
Score = 142 bits (358), Expect = 2e-33
Identities = 66/92 (71%), Positives = 77/92 (82%)
Frame = -3
Query: 460 GVQSADVTRAYLSNVCVARELLRNGLGYALLEKSKLVAHNWGITDLYVHVAVDNEPAKNL 281
GV + TRAYLSNVCVA+EL RNGLGYAL++KSK +A WGITDLYVHVA++NE A+ L
Sbjct: 195 GVNESSHTRAYLSNVCVAKELQRNGLGYALVDKSKKLAREWGITDLYVHVAINNEAAQKL 254
Query: 280 YTKSGFIYESDEPAWQARFLDRPRRLLLWTGL 185
Y K GF+YES+EPAW+ARFL RPRRLLLW L
Sbjct: 255 YNKCGFVYESEEPAWKARFLGRPRRLLLWLDL 286
>ref|NP_567795.1| putative protein; protein id: At4g28030.1, supported by cDNA:
11590., supported by cDNA: gi_15081770 [Arabidopsis
thaliana] gi|15081771|gb|AAK82540.1| AT4g28030/T13J8_140
[Arabidopsis thaliana] gi|22137098|gb|AAM91394.1|
At4g28030/T13J8_140 [Arabidopsis thaliana]
Length = 274
Score = 135 bits (339), Expect = 3e-31
Identities = 67/97 (69%), Positives = 77/97 (79%)
Frame = -3
Query: 475 KPEVSGVQSADVTRAYLSNVCVARELLRNGLGYALLEKSKLVAHNWGITDLYVHVAVDNE 296
KPE GV D RAYLSNVCVA+EL RNG+GY L++KSK VA WGITD+YVHV VDNE
Sbjct: 173 KPEGIGV---DFARAYLSNVCVAKELHRNGVGYKLIDKSKRVAGEWGITDMYVHVTVDNE 229
Query: 295 PAKNLYTKSGFIYESDEPAWQARFLDRPRRLLLWTGL 185
AK+LY KSGF E+ EPAWQAR+L+RP+RLLLW L
Sbjct: 230 AAKSLYMKSGFEQETAEPAWQARYLNRPQRLLLWLAL 266
>gb|AAM61296.1| unknown [Arabidopsis thaliana]
Length = 274
Score = 135 bits (339), Expect = 3e-31
Identities = 67/97 (69%), Positives = 77/97 (79%)
Frame = -3
Query: 475 KPEVSGVQSADVTRAYLSNVCVARELLRNGLGYALLEKSKLVAHNWGITDLYVHVAVDNE 296
KPE GV D RAYLSNVCVA+EL RNG+GY L++KSK VA WGITD+YVHV VDNE
Sbjct: 173 KPEGIGV---DFARAYLSNVCVAKELHRNGVGYKLIDKSKRVAGEWGITDMYVHVTVDNE 229
Query: 295 PAKNLYTKSGFIYESDEPAWQARFLDRPRRLLLWTGL 185
AK+LY KSGF E+ EPAWQAR+L+RP+RLLLW L
Sbjct: 230 AAKSLYMKSGFEQETAEPAWQARYLNRPQRLLLWLAL 266
>ref|NP_440447.1| unknown protein [Synechocystis sp. PCC 6803] gi|7470536|pir||S75213
hypothetical protein slr1906 - Synechocystis sp. (strain
PCC 6803) gi|1652203|dbj|BAA17127.1|
ORF_ID:slr1906~unknown protein [Synechocystis sp. PCC
6803]
Length = 194
Score = 63.5 bits (153), Expect = 1e-09
Identities = 32/80 (40%), Positives = 48/80 (60%)
Frame = -3
Query: 439 TRAYLSNVCVARELLRNGLGYALLEKSKLVAHNWGITDLYVHVAVDNEPAKNLYTKSGFI 260
T AY+SN+ V+ + R G+ L++K + +A W L +HV +N A+NLY GFI
Sbjct: 96 TTAYISNLAVSPQHRRLGIAKQLIQKCEAIADQWQCRRLSLHVMENNLGAQNLYQTLGFI 155
Query: 259 YESDEPAWQARFLDRPRRLL 200
Y+ E +W+A +PRRLL
Sbjct: 156 YQEAEWSWRAWLWQKPRRLL 175
>gb|ZP_00108443.1| hypothetical protein [Nostoc punctiforme]
Length = 154
Score = 57.4 bits (137), Expect = 8e-08
Identities = 29/78 (37%), Positives = 41/78 (52%)
Frame = -3
Query: 430 YLSNVCVARELLRNGLGYALLEKSKLVAHNWGITDLYVHVAVDNEPAKNLYTKSGFIYES 251
YLSN+ V + R+G+ LL + V+ WG DLY+HV +N A+ LY K G+
Sbjct: 67 YLSNLAVHPKYRRHGVASGLLTSCEKVSREWGFQDLYLHVLENNHQARQLYFKVGYRVHK 126
Query: 250 DEPAWQARFLDRPRRLLL 197
E W L R ++LL
Sbjct: 127 VESNWNTFLLGRSSQILL 144
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 387,727,666
Number of Sequences: 1393205
Number of extensions: 7723953
Number of successful extensions: 18846
Number of sequences better than 10.0: 156
Number of HSP's better than 10.0 without gapping: 18558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18836
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 13397825772
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
