Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015760A_C01 KMC015760A_c01
(497 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_181262.1| putative adenylate kinase; protein id: At2g3725... 184 5e-46
dbj|BAA85412.1| ESTs AU065232(E60855),C23624(S1554), AU078241(E6... 166 1e-40
gb|AAN76661.1| adenylate kinase [Solanum tuberosum] 153 1e-36
ref|NP_030474.1| similar to putative adenylate kinase; protein i... 147 8e-35
ref|NP_783103.1| adenylate kinase [Clostridium tetani E88] gi|28... 49 4e-05
>ref|NP_181262.1| putative adenylate kinase; protein id: At2g37250.1, supported by
cDNA: 15831., supported by cDNA: gi_15010785, supported
by cDNA: gi_15450418, supported by cDNA: gi_15810108
[Arabidopsis thaliana] gi|25408540|pir||D84790 probable
adenylate kinase [imported] - Arabidopsis thaliana
gi|4056480|gb|AAC98046.1| putative adenylate kinase
[Arabidopsis thaliana] gi|15010786|gb|AAK74052.1|
At2g37250/F3G5.4 [Arabidopsis thaliana]
gi|15450419|gb|AAK96503.1| At2g37250/F3G5.4 [Arabidopsis
thaliana] gi|15810109|gb|AAL06980.1| At2g37250/F3G5.4
[Arabidopsis thaliana] gi|21553713|gb|AAM62806.1|
putative adenylate kinase [Arabidopsis thaliana]
Length = 284
Score = 184 bits (467), Expect = 5e-46
Identities = 82/107 (76%), Positives = 96/107 (89%)
Frame = -2
Query: 496 CSQCGKNFNVASLNIKGENGRPGVTMAPLFPPEHCMSKLITRSDDTEVVIKERLRIYNET 317
CSQCGK FNVA +N+KGENGRPG++M PL PP CMSKL+TR+DDTE V+K RLRIYNET
Sbjct: 178 CSQCGKGFNVAHINLKGENGRPGISMDPLLPPHQCMSKLVTRADDTEEVVKARLRIYNET 237
Query: 316 SRPVEEFYRSRGKLLEFDLPGGIPESWPKLLHALNLDDYEEKQSAAA 176
S+P+EE+YR++GKL+EFDLPGGIPESWP+LL AL LDDYEEKQS AA
Sbjct: 238 SQPLEEYYRTKGKLMEFDLPGGIPESWPRLLEALRLDDYEEKQSVAA 284
>dbj|BAA85412.1| ESTs AU065232(E60855),C23624(S1554), AU078241(E60855) correspond to
a region of the predicted gene.~similar to putative
adenylate kinase. (AC005896) [Oryza sativa (japonica
cultivar-group)]
Length = 323
Score = 166 bits (421), Expect = 1e-40
Identities = 75/107 (70%), Positives = 90/107 (84%)
Frame = -2
Query: 496 CSQCGKNFNVASLNIKGENGRPGVTMAPLFPPEHCMSKLITRSDDTEVVIKERLRIYNET 317
C QCGKNFN+A +++KGENG P + MAPL PP +CMSKLITR+DDTE V++ RL+IYN+
Sbjct: 217 CGQCGKNFNLACIDVKGENGLPPIYMAPLLPPNNCMSKLITRADDTEEVVRNRLQIYNDM 276
Query: 316 SRPVEEFYRSRGKLLEFDLPGGIPESWPKLLHALNLDDYEEKQSAAA 176
S+PVE FYR +GKLLEFDLPGGIPESWPKLLH LNL+D EE + A A
Sbjct: 277 SQPVEGFYRQQGKLLEFDLPGGIPESWPKLLHVLNLEDQEEMKLATA 323
>gb|AAN76661.1| adenylate kinase [Solanum tuberosum]
Length = 288
Score = 153 bits (386), Expect = 1e-36
Identities = 73/107 (68%), Positives = 87/107 (81%)
Frame = -2
Query: 496 CSQCGKNFNVASLNIKGENGRPGVTMAPLFPPEHCMSKLITRSDDTEVVIKERLRIYNET 317
CS+CGKNFNVAS+++ GENG P ++MA L PP KLITR+DDTE ++KERL IY +
Sbjct: 182 CSECGKNFNVASIDVAGENGAPRISMARLNPPFTVCFKLITRADDTEAIVKERLSIYWDK 241
Query: 316 SRPVEEFYRSRGKLLEFDLPGGIPESWPKLLHALNLDDYEEKQSAAA 176
S+PVE+FYRS+GKLLEFDLPGGIPESWPKLL LNLD+ E K S AA
Sbjct: 242 SQPVEDFYRSQGKLLEFDLPGGIPESWPKLLEVLNLDEQEYKLSPAA 288
>ref|NP_030474.1| similar to putative adenylate kinase; protein id: At2g39270.1
[Arabidopsis thaliana] gi|7484792|pir||T02575 adenylate
kinase homolog T16B24.9 - Arabidopsis thaliana
gi|27754513|gb|AAO22704.1| putative adenylate kinase
[Arabidopsis thaliana] gi|28393969|gb|AAO42392.1|
putative adenylate kinase [Arabidopsis thaliana]
Length = 295
Score = 147 bits (370), Expect = 8e-35
Identities = 69/107 (64%), Positives = 89/107 (82%)
Frame = -2
Query: 496 CSQCGKNFNVASLNIKGENGRPGVTMAPLFPPEHCMSKLITRSDDTEVVIKERLRIYNET 317
CS+CG N+NVA ++IKG++ P + M PL PP +C SKLI+R+DDTE V+KERLRIYN+
Sbjct: 191 CSECGGNYNVACIDIKGDDDTPRMYMPPLLPPPNCESKLISRADDTEEVVKERLRIYNKM 250
Query: 316 SRPVEEFYRSRGKLLEFDLPGGIPESWPKLLHALNLDDYEEKQSAAA 176
++PVEEFY+ RGKLLEF+LPGGIPESW +LL AL+L+D +KQSA A
Sbjct: 251 TQPVEEFYKKRGKLLEFELPGGIPESWARLLRALHLED--DKQSAIA 295
>ref|NP_783103.1| adenylate kinase [Clostridium tetani E88]
gi|28204603|gb|AAO37040.1| adenylate kinase [Clostridium
tetani E88]
Length = 216
Score = 48.5 bits (114), Expect = 4e-05
Identities = 24/78 (30%), Positives = 44/78 (55%)
Frame = -2
Query: 496 CSQCGKNFNVASLNIKGENGRPGVTMAPLFPPEHCMSKLITRSDDTEVVIKERLRIYNET 317
C +CG ++++ + K E GV + C KL+ R DDT+ + ERL +Y++
Sbjct: 130 CGECGASYHIKFITPKTE----GVC-------DLCGGKLVQRKDDTKETVLERLEVYSKQ 178
Query: 316 SRPVEEFYRSRGKLLEFD 263
++P+ E+Y+++ LL D
Sbjct: 179 TQPLIEYYKNKNVLLALD 196
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 430,673,289
Number of Sequences: 1393205
Number of extensions: 8834465
Number of successful extensions: 26697
Number of sequences better than 10.0: 238
Number of HSP's better than 10.0 without gapping: 24124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26687
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14783057727
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
