Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015751A_C01 KMC015751A_c01
(555 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC07390.1| hypothetical protein [Oryza sativa (japonica cul... 129 2e-29
ref|NP_175906.1| hypothetical protein; protein id: At1g55090.1 [... 120 1e-26
ref|XP_215133.1| similar to RIKEN cDNA 9130012B15 [Mus musculus]... 90 2e-17
dbj|BAC57897.1| NAD+ synthetase [Rattus norvegicus] 90 2e-17
gb|AAH38016.1| similar to Glutamine-dependent NAD Synthetase [Mu... 89 3e-17
>dbj|BAC07390.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 735
Score = 129 bits (325), Expect = 2e-29
Identities = 65/96 (67%), Positives = 74/96 (76%), Gaps = 4/96 (4%)
Frame = -2
Query: 554 KYYSINRHKMTVMTPSYHAESYSPEDNRFDLRQFLYNARWPYQFQKIDELVRGMDVKDVQ 375
KYY+INRHKMTV+TPSYHAESYSPEDNRFDLRQFLYNARWPYQF+KIDELV+ MD
Sbjct: 640 KYYAINRHKMTVLTPSYHAESYSPEDNRFDLRQFLYNARWPYQFRKIDELVQDMDKDGKW 699
Query: 374 QSEEHDEI----VVAASDGVGGMGVAAAGSGNPSVG 279
+ E+ V +++G GGMGV A GS NPS G
Sbjct: 700 VNSTEGELRRRKGVRSAEG-GGMGVVAVGSANPSAG 734
>ref|NP_175906.1| hypothetical protein; protein id: At1g55090.1 [Arabidopsis
thaliana] gi|25405791|pir||E96592 hypothetical protein
T7N22.4 [imported] - Arabidopsis thaliana
gi|12321572|gb|AAG50835.1|AC073944_2 hypothetical
protein [Arabidopsis thaliana]
Length = 725
Score = 120 bits (300), Expect = 1e-26
Identities = 59/93 (63%), Positives = 70/93 (74%)
Frame = -2
Query: 554 KYYSINRHKMTVMTPSYHAESYSPEDNRFDLRQFLYNARWPYQFQKIDELVRGMDVKDVQ 375
KYYSINRHKMTV+TPSYHAESYSPEDNRFDLRQFLYN++WPYQF+KIDE+V ++ V
Sbjct: 640 KYYSINRHKMTVLTPSYHAESYSPEDNRFDLRQFLYNSKWPYQFKKIDEIVDSLNGDSVA 699
Query: 374 QSEEHDEIVVAASDGVGGMGVAAAGSGNPSVGL 276
EE ++ +GV AA SG+PS GL
Sbjct: 700 FPEEE-------ANSNKEIGVVAANSGDPSAGL 725
>ref|XP_215133.1| similar to RIKEN cDNA 9130012B15 [Mus musculus] [Rattus norvegicus]
Length = 140
Score = 90.1 bits (222), Expect = 2e-17
Identities = 41/62 (66%), Positives = 48/62 (77%)
Frame = -2
Query: 548 YSINRHKMTVMTPSYHAESYSPEDNRFDLRQFLYNARWPYQFQKIDELVRGMDVKDVQQS 369
YSINRHKMT +TP+YHAE+YSP+DNRFDLR FLYN RWP+QF ID V ++ K Q
Sbjct: 58 YSINRHKMTTLTPAYHAENYSPDDNRFDLRPFLYNTRWPWQFLCIDNQVVQLERKTSQTL 117
Query: 368 EE 363
EE
Sbjct: 118 EE 119
>dbj|BAC57897.1| NAD+ synthetase [Rattus norvegicus]
Length = 725
Score = 90.1 bits (222), Expect = 2e-17
Identities = 41/62 (66%), Positives = 48/62 (77%)
Frame = -2
Query: 548 YSINRHKMTVMTPSYHAESYSPEDNRFDLRQFLYNARWPYQFQKIDELVRGMDVKDVQQS 369
YSINRHKMT +TP+YHAE+YSP+DNRFDLR FLYN RWP+QF ID V ++ K Q
Sbjct: 643 YSINRHKMTTLTPAYHAENYSPDDNRFDLRPFLYNTRWPWQFLCIDNQVVQLERKTSQTL 702
Query: 368 EE 363
EE
Sbjct: 703 EE 704
>gb|AAH38016.1| similar to Glutamine-dependent NAD Synthetase [Mus musculus]
Length = 725
Score = 89.4 bits (220), Expect = 3e-17
Identities = 40/62 (64%), Positives = 48/62 (76%)
Frame = -2
Query: 548 YSINRHKMTVMTPSYHAESYSPEDNRFDLRQFLYNARWPYQFQKIDELVRGMDVKDVQQS 369
YS+NRHKMT +TP+YHAE+YSP+DNRFDLR FLYN RWP+QF ID V ++ K Q
Sbjct: 643 YSMNRHKMTTLTPAYHAENYSPDDNRFDLRPFLYNTRWPWQFLCIDNQVLQLERKASQTR 702
Query: 368 EE 363
EE
Sbjct: 703 EE 704
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 457,478,757
Number of Sequences: 1393205
Number of extensions: 9939219
Number of successful extensions: 35651
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 31691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35406
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19521267756
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
