Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015730A_C01 KMC015730A_c01
(602 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T05994 protein kinase homolog F17M5.190 - Arabidopsis thali... 65 5e-10
ref|NP_567920.1| somatic embryogenesis receptor-like kinase -lik... 65 5e-10
gb|AAK68074.1|AF384970_1 somatic embryogenesis receptor-like kin... 65 5e-10
gb|AAN64293.1| somatic embryogenesis receptor kinase 1 [Medicago... 65 9e-10
gb|AAK82463.1| At1g71830/F14O23_24 [Arabidopsis thaliana] gi|250... 63 3e-09
>pir||T05994 protein kinase homolog F17M5.190 - Arabidopsis thaliana
gi|4490310|emb|CAB38801.1| somatic embryogenesis
receptor-like kinase-like protein [Arabidopsis thaliana]
gi|7270291|emb|CAB80060.1| somatic embryogenesis
receptor-like kinase-like protein [Arabidopsis thaliana]
Length = 523
Score = 65.5 bits (158), Expect = 5e-10
Identities = 32/54 (59%), Positives = 39/54 (71%), Gaps = 2/54 (3%)
Frame = -3
Query: 600 MLEGDXLXEKWDPWQKEEMFRPDFNSNMPHPS-ANWIV-DSTSHIQPDELSGPR 445
MLEGD L E+W+ WQKEEMFR DFN HP+ + WI+ DSTS I+ + SGPR
Sbjct: 470 MLEGDGLAERWEEWQKEEMFRQDFNYPTHHPAVSGWIIGDSTSQIENEYPSGPR 523
>ref|NP_567920.1| somatic embryogenesis receptor-like kinase -like protein; protein
id: At4g33430.1, supported by cDNA: gi_14573458
[Arabidopsis thaliana]
Length = 615
Score = 65.5 bits (158), Expect = 5e-10
Identities = 32/54 (59%), Positives = 39/54 (71%), Gaps = 2/54 (3%)
Frame = -3
Query: 600 MLEGDXLXEKWDPWQKEEMFRPDFNSNMPHPS-ANWIV-DSTSHIQPDELSGPR 445
MLEGD L E+W+ WQKEEMFR DFN HP+ + WI+ DSTS I+ + SGPR
Sbjct: 562 MLEGDGLAERWEEWQKEEMFRQDFNYPTHHPAVSGWIIGDSTSQIENEYPSGPR 615
>gb|AAK68074.1|AF384970_1 somatic embryogenesis receptor-like kinase 3 [Arabidopsis thaliana]
Length = 615
Score = 65.5 bits (158), Expect = 5e-10
Identities = 32/54 (59%), Positives = 39/54 (71%), Gaps = 2/54 (3%)
Frame = -3
Query: 600 MLEGDXLXEKWDPWQKEEMFRPDFNSNMPHPS-ANWIV-DSTSHIQPDELSGPR 445
MLEGD L E+W+ WQKEEMFR DFN HP+ + WI+ DSTS I+ + SGPR
Sbjct: 562 MLEGDGLAERWEEWQKEEMFRQDFNYPTHHPAVSGWIIGDSTSQIENEYPSGPR 615
>gb|AAN64293.1| somatic embryogenesis receptor kinase 1 [Medicago truncatula]
gi|24935326|gb|AAN64294.1| somatic embryogenesis
receptor kinase 1 [Medicago truncatula]
Length = 627
Score = 64.7 bits (156), Expect = 9e-10
Identities = 29/52 (55%), Positives = 37/52 (70%)
Frame = -3
Query: 600 MLEGDXLXEKWDPWQKEEMFRPDFNSNMPHPSANWIVDSTSHIQPDELSGPR 445
MLEGD L E+WD WQK E+ R + PHP+++WIVDST ++ ELSGPR
Sbjct: 577 MLEGDGLAERWDEWQKGEVLRQEVEL-APHPNSDWIVDSTENLHAVELSGPR 627
>gb|AAK82463.1| At1g71830/F14O23_24 [Arabidopsis thaliana]
gi|25090706|gb|AAN72307.1| At1g71830/F14O23_24
[Arabidopsis thaliana]
Length = 625
Score = 62.8 bits (151), Expect = 3e-09
Identities = 28/52 (53%), Positives = 39/52 (74%)
Frame = -3
Query: 600 MLEGDXLXEKWDPWQKEEMFRPDFNSNMPHPSANWIVDSTSHIQPDELSGPR 445
MLEGD L EKWD WQK E+ R + + + P+P+++WI+DST ++ ELSGPR
Sbjct: 575 MLEGDGLAEKWDEWQKVEILREEIDLS-PNPNSDWILDSTYNLHAVELSGPR 625
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 514,101,374
Number of Sequences: 1393205
Number of extensions: 10897725
Number of successful extensions: 20911
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 20268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20885
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23711793746
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
