Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015647A_C01 KMC015647A_c01
(536 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_190160.1| putative protein; protein id: At3g45740.1 [Arab... 138 4e-32
gb|AAO17009.1| Hypothetical protein [Oryza sativa (japonica cult... 109 2e-23
ref|NP_593238.1| CDP-alcohol phosphatidyltransferase [Schizosacc... 55 5e-07
gb|EAA30136.1| hypothetical protein [Neurospora crassa] 51 8e-06
gb|EAA35343.1| hypothetical protein [Neurospora crassa] 50 2e-05
>ref|NP_190160.1| putative protein; protein id: At3g45740.1 [Arabidopsis thaliana]
gi|11282374|pir||T47514 hypothetical protein T6D9.70 -
Arabidopsis thaliana gi|7019640|emb|CAB75787.1| putative
protein [Arabidopsis thaliana]
Length = 376
Score = 138 bits (348), Expect = 4e-32
Identities = 68/98 (69%), Positives = 81/98 (82%)
Frame = -2
Query: 535 PHPSVFKNAENVLQQFVPCVDLNDFNNKNAQYFQTLYMIGDNPAVDIRGAQQTGHPWFSI 356
P+P VFKNAE+VL++ + N+ + +F+TLYMIGDNP +DIRGA+Q G PWFSI
Sbjct: 276 PNPFVFKNAEDVLKEIATSPYSS---NQGSHHFKTLYMIGDNPKIDIRGARQAGTPWFSI 332
Query: 355 LTRTGVFKGKENHDKFPADLVVDTVEEAVDFILTRESA 242
LTRTGVFKGK+NH +FPADLVVDTVEEAVDFILTRESA
Sbjct: 333 LTRTGVFKGKDNHSEFPADLVVDTVEEAVDFILTRESA 370
>gb|AAO17009.1| Hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 389
Score = 109 bits (273), Expect = 2e-23
Identities = 51/98 (52%), Positives = 70/98 (71%), Gaps = 2/98 (2%)
Frame = -2
Query: 535 PHPSVFKNAENVLQQFVPCVDLNDFNNKNAQY--FQTLYMIGDNPAVDIRGAQQTGHPWF 362
P+P VFKNA N+L++ C+ + K + F T+YM+GDNP VDI GA + G PW
Sbjct: 289 PNPFVFKNAANILEKLAICMHPSSLPTKEVEEHRFSTIYMVGDNPKVDINGALKAGPPWS 348
Query: 361 SILTRTGVFKGKENHDKFPADLVVDTVEEAVDFILTRE 248
+LTRTGVF+GK+N ++PADLVVDTVE+A++ IL +E
Sbjct: 349 PVLTRTGVFRGKDNDPQYPADLVVDTVEDAINCILEKE 386
>ref|NP_593238.1| CDP-alcohol phosphatidyltransferase [Schizosaccharomyces pombe]
gi|7492292|pir||T38148 phosphatidyl synthase - fission
yeast (Schizosaccharomyces pombe)
gi|2414601|emb|CAB16578.1| CDP-alcohol
phosphatidyltransferase [Schizosaccharomyces pombe]
Length = 570
Score = 55.1 bits (131), Expect = 5e-07
Identities = 34/95 (35%), Positives = 52/95 (53%)
Frame = -2
Query: 535 PHPSVFKNAENVLQQFVPCVDLNDFNNKNAQYFQTLYMIGDNPAVDIRGAQQTGHPWFSI 356
PH + A+N+L + + + + + ++M+GDNP DIRGA G W SI
Sbjct: 270 PHKLTYDYAKNILMKKHKTLGITNPPKE-------IFMVGDNPESDIRGANNYG--WTSI 320
Query: 355 LTRTGVFKGKENHDKFPADLVVDTVEEAVDFILTR 251
L RTG+F+G +N K+ A V D V E V + L++
Sbjct: 321 LVRTGIFQG-DNSPKYSAKHVSDNVWEGVRWALSK 354
>gb|EAA30136.1| hypothetical protein [Neurospora crassa]
Length = 526
Score = 51.2 bits (121), Expect = 8e-06
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Frame = -2
Query: 535 PHPSVFKNAENVLQQFVPCVDLNDFNNKNAQYFQTLYMIGDNPAVDIRGAQQTGHPWFSI 356
P + +K A+ V+ ++ + + + Q +YM+GDNPA DI G G W +
Sbjct: 414 PEMATYKYADEVIASWMEQI------HGEEKIPQNIYMVGDNPASDIVGGNLYG--WNTC 465
Query: 355 LTRTGVFKGKENHDKFPADL-VVDTVEEAVDFILTRE 248
L RTGVF+G EN ++ PA+ V V EAV +E
Sbjct: 466 LVRTGVFQGGENDEENPANFGVFANVWEAVTSACRKE 502
>gb|EAA35343.1| hypothetical protein [Neurospora crassa]
Length = 419
Score = 49.7 bits (117), Expect = 2e-05
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
Frame = -2
Query: 436 QTLYMIGDNPAVDIRGA----QQTGHPWFSILTRTGVFKGKENHDK-----FPADLVVDT 284
+++YM+GDNP DI GA + G W SIL RTGV+ + +K F ++VD
Sbjct: 341 KSVYMVGDNPESDIAGANDFHSEAGTEWCSILVRTGVWSPEHAGEKALQGRFKPKVIVDD 400
Query: 283 VEEAVDFILTRE 248
EAV + L RE
Sbjct: 401 AREAVRWALKRE 412
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 425,511,589
Number of Sequences: 1393205
Number of extensions: 8697834
Number of successful extensions: 19919
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 19397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19904
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18173652336
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
