Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015596A_C01 KMC015596A_c01
(742 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_077140.1| RIKEN cDNA 5430428G01 gene [Mus musculus] gi|12... 115 8e-25
dbj|BAC25513.1| unnamed protein product [Mus musculus] 115 8e-25
ref|NP_659425.1| hypothetical protein MGC19780 [Homo sapiens] gi... 111 1e-23
ref|NP_573031.1| CG6308-PA [Drosophila melanogaster] gi|7293076|... 104 1e-21
gb|EAA07383.1| agCP10174 [Anopheles gambiae str. PEST] 93 5e-18
>ref|NP_077140.1| RIKEN cDNA 5430428G01 gene [Mus musculus]
gi|12805597|gb|AAH02278.1| Unknown (protein for
MGC:7683) [Mus musculus] gi|12848045|dbj|BAB27807.1|
unnamed protein product [Mus musculus]
Length = 217
Score = 115 bits (287), Expect = 8e-25
Identities = 53/115 (46%), Positives = 83/115 (72%)
Frame = -1
Query: 700 KIYRSREVGQSYITSVWTTLIAMVHALWLMIKIRPEVILCNGPGTCIPLCAIAFIFKVMG 521
+I RSREV QS+++SV+TT +M + L+++I+P+++LCNGPGTC+P+C A + ++G
Sbjct: 105 RIPRSREVRQSWLSSVFTTFYSMWFSFPLVLRIKPDLVLCNGPGTCVPICVSALLLGILG 164
Query: 520 IRWSSIFYVESIARVRRLSLSGLLLYKLRMADQLFVPWPQLQRQYPRATYVGRLM 356
++ I YVESI RV LSLSG +L L +D V WP L+ +YP++ Y+GR++
Sbjct: 165 VKKVIIVYVESICRVETLSLSGKILRHL--SDYFIVQWPTLKEKYPKSVYLGRIV 217
>dbj|BAC25513.1| unnamed protein product [Mus musculus]
Length = 127
Score = 115 bits (287), Expect = 8e-25
Identities = 53/115 (46%), Positives = 83/115 (72%)
Frame = -1
Query: 700 KIYRSREVGQSYITSVWTTLIAMVHALWLMIKIRPEVILCNGPGTCIPLCAIAFIFKVMG 521
+I RSREV QS+++SV+TT +M + L+++I+P+++LCNGPGTC+P+C A + ++G
Sbjct: 15 RIPRSREVRQSWLSSVFTTFYSMWFSFPLVLRIKPDLVLCNGPGTCVPICVSALLLGILG 74
Query: 520 IRWSSIFYVESIARVRRLSLSGLLLYKLRMADQLFVPWPQLQRQYPRATYVGRLM 356
++ I YVESI RV LSLSG +L L +D V WP L+ +YP++ Y+GR++
Sbjct: 75 VKKVIIVYVESICRVETLSLSGKILRHL--SDYFIVQWPTLKEKYPKSVYLGRIV 127
>ref|NP_659425.1| hypothetical protein MGC19780 [Homo sapiens]
gi|15079804|gb|AAH11706.1|AAH11706 Similar to RIKEN cDNA
5430428G01 gene [Homo sapiens]
Length = 216
Score = 111 bits (277), Expect = 1e-23
Identities = 52/115 (45%), Positives = 83/115 (71%)
Frame = -1
Query: 700 KIYRSREVGQSYITSVWTTLIAMVHALWLMIKIRPEVILCNGPGTCIPLCAIAFIFKVMG 521
+I RSREV QS+ ++V+TTL +M + L+ +++P+++LCNGPGTC+P+C A + ++G
Sbjct: 104 RIPRSREVQQSWPSTVFTTLHSMWLSFPLIHRVKPDLVLCNGPGTCVPICVSALLLGILG 163
Query: 520 IRWSSIFYVESIARVRRLSLSGLLLYKLRMADQLFVPWPQLQRQYPRATYVGRLM 356
I+ I YVESI RV LS+SG +L+ L +D V WP L+ +YP++ Y+GR++
Sbjct: 164 IKKVIIVYVESICRVETLSMSGKILFHL--SDYFIVQWPALKEKYPKSVYLGRIV 216
>ref|NP_573031.1| CG6308-PA [Drosophila melanogaster] gi|7293076|gb|AAF48461.1|
CG6308-PA [Drosophila melanogaster]
Length = 191
Score = 104 bits (260), Expect = 1e-21
Identities = 55/124 (44%), Positives = 85/124 (68%), Gaps = 5/124 (4%)
Frame = -1
Query: 712 AQFMKIYRSREVGQSYITSVWTTLIAMVHALWLMIKIRPEVILCNGPGTCIPLCAIAFIF 533
A+F+K+ RSR+VGQS+++S++T+L A++ + +L+ + RP++ILCNGPGTC+P C A+++
Sbjct: 70 AEFVKVPRSRDVGQSWLSSIFTSLWALLWSCYLVWRDRPQLILCNGPGTCVPFCYAAYLW 129
Query: 532 KVMG--IRWSSIFYVESIARVRRLSLSGLLLYKLRMADQLFVPWPQLQRQY---PRATYV 368
+++G S I +VES RV LSLSG LL L +AD V WP L +Y Y
Sbjct: 130 RLLGRLPSHSRIVFVESFCRVETLSLSGRLL--LPLADLFVVHWPALATRYLDKKNVRYF 187
Query: 367 GRLM 356
GR++
Sbjct: 188 GRIL 191
>gb|EAA07383.1| agCP10174 [Anopheles gambiae str. PEST]
Length = 223
Score = 92.8 bits (229), Expect = 5e-18
Identities = 47/105 (44%), Positives = 73/105 (68%), Gaps = 1/105 (0%)
Frame = -1
Query: 709 QFMKIYRSREVGQSYITSVWTTLIAMVHALWLMIKIRPEVILCNGPGTCIPLCAIAFIFK 530
+ + I RSR V QSY++SV TT+++++ + +++K RPE+IL NGPGTC+P+C +AF+ +
Sbjct: 104 EIVTIPRSRAVHQSYLSSVATTVLSLLSCVPIVLKARPELILTNGPGTCVPVCLVAFLAR 163
Query: 529 VMGIRWS-SIFYVESIARVRRLSLSGLLLYKLRMADQLFVPWPQL 398
++ + I +VES RVR LSLSG +L L + D V WP+L
Sbjct: 164 LLFLNTKCRIVFVESFCRVRSLSLSGRIL--LYIVDMFVVQWPEL 206
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 605,315,408
Number of Sequences: 1393205
Number of extensions: 12785181
Number of successful extensions: 25385
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 24633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25362
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 35469585522
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
