Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015402A_C01 KMC015402A_c01
(523 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB61883.1| aminoacylase-1 [Lycopersicon esculentum] 96 2e-19
ref|NP_568036.1| putative protein; protein id: At4g38220.1 [Arab... 93 2e-18
gb|AAL75900.1| AT4g38220/F20D10_340 [Arabidopsis thaliana] 93 2e-18
ref|NP_175103.1| aminoacylase, putative; protein id: At1g44820.1... 78 5e-14
pir||C96507 hypothetical protein T12C22.9 [imported] - Arabidops... 78 5e-14
>emb|CAB61883.1| aminoacylase-1 [Lycopersicon esculentum]
Length = 55
Score = 96.3 bits (238), Expect = 2e-19
Identities = 45/55 (81%), Positives = 49/55 (88%)
Frame = -3
Query: 488 IGFSPMANTPILLHDHNEFLNKDEYLKGIKIYESIIKTYASFEDHGRDGGSRDEL 324
IGFSPMANTPILLHDHNEFLNKDEYLKGI +YESIIKTYAS+ + RD SR+EL
Sbjct: 1 IGFSPMANTPILLHDHNEFLNKDEYLKGIDVYESIIKTYASYIQYQRDDASREEL 55
>ref|NP_568036.1| putative protein; protein id: At4g38220.1 [Arabidopsis thaliana]
Length = 444
Score = 92.8 bits (229), Expect = 2e-18
Identities = 44/66 (66%), Positives = 53/66 (79%)
Frame = -3
Query: 521 SRYFREIGMPAIGFSPMANTPILLHDHNEFLNKDEYLKGIKIYESIIKTYASFEDHGRDG 342
+RYFR+ G+PA GFSP++NTP LLHDHNE+L K EYLKGI++Y SIIK YAS+E
Sbjct: 382 ARYFRKAGVPAFGFSPISNTPSLLHDHNEYLGKAEYLKGIEVYVSIIKAYASYES---KS 438
Query: 341 GSRDEL 324
GSRDEL
Sbjct: 439 GSRDEL 444
>gb|AAL75900.1| AT4g38220/F20D10_340 [Arabidopsis thaliana]
Length = 430
Score = 92.8 bits (229), Expect = 2e-18
Identities = 44/66 (66%), Positives = 53/66 (79%)
Frame = -3
Query: 521 SRYFREIGMPAIGFSPMANTPILLHDHNEFLNKDEYLKGIKIYESIIKTYASFEDHGRDG 342
+RYFR+ G+PA GFSP++NTP LLHDHNE+L K EYLKGI++Y SIIK YAS+E
Sbjct: 368 ARYFRKAGVPAFGFSPISNTPSLLHDHNEYLGKAEYLKGIEVYVSIIKAYASYES---KS 424
Query: 341 GSRDEL 324
GSRDEL
Sbjct: 425 GSRDEL 430
>ref|NP_175103.1| aminoacylase, putative; protein id: At1g44820.1 [Arabidopsis
thaliana]
Length = 441
Score = 78.2 bits (191), Expect = 5e-14
Identities = 33/54 (61%), Positives = 42/54 (77%)
Frame = -3
Query: 521 SRYFREIGMPAIGFSPMANTPILLHDHNEFLNKDEYLKGIKIYESIIKTYASFE 360
SR+ R +G+P GFSPM NTPILLHDHNEFL ++KGI++YES+I +SFE
Sbjct: 381 SRFIRTLGIPTFGFSPMTNTPILLHDHNEFLKDTVFMKGIEVYESVISALSSFE 434
>pir||C96507 hypothetical protein T12C22.9 [imported] - Arabidopsis thaliana
gi|8655992|gb|AAF78265.1|AC020576_9 Contains similarity
to aminoacylase from Sus scrofa domestica gi|S27010 and
contains a peptidase M20 PF|01546 domain. ESTs
gb|H76043, gb|AA394953, gb|AI995115, gb|AA651481 come
from this gene. [Arabidopsis thaliana]
Length = 438
Score = 78.2 bits (191), Expect = 5e-14
Identities = 33/54 (61%), Positives = 42/54 (77%)
Frame = -3
Query: 521 SRYFREIGMPAIGFSPMANTPILLHDHNEFLNKDEYLKGIKIYESIIKTYASFE 360
SR+ R +G+P GFSPM NTPILLHDHNEFL ++KGI++YES+I +SFE
Sbjct: 378 SRFIRTLGIPTFGFSPMTNTPILLHDHNEFLKDTVFMKGIEVYESVISALSSFE 431
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 418,634,449
Number of Sequences: 1393205
Number of extensions: 8329563
Number of successful extensions: 17716
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 17334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17716
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16731298976
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
