Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015345A_C01 KMC015345A_c01
(367 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_524213.1| Cysteine string protein CG6395-PA gi|157127|gb|... 35 0.24
sp|Q03751|CSP_DROME Cysteine string protein gi|157129|gb|AAA2843... 35 0.24
ref|NP_730713.1| Cysteine string protein CG6395-PB gi|3047002|gb... 35 0.24
ref|NP_730714.2| Cysteine string protein CG6395-PC gi|3047004|gb... 35 0.24
gb|AAK14805.1| organic solute transporter alpha [Raja erinacea] 35 0.31
>ref|NP_524213.1| Cysteine string protein CG6395-PA gi|157127|gb|AAA28431.1| csp29
gi|3047005|gb|AAD09431.1| cysteine string protein 3
[Drosophila melanogaster] gi|7296533|gb|AAF51817.1|
CG6395-PA [Drosophila melanogaster]
Length = 223
Score = 35.0 bits (79), Expect = 0.24
Identities = 14/36 (38%), Positives = 17/36 (46%)
Frame = +3
Query: 219 VTFIYGVTDGDISVIATSTFHITLCECCCCCTCCRN 326
V + VT + + IT C CCCCC CC N
Sbjct: 97 VNAYFVVTSPAVKAVVICCAVITGCCCCCCCCCCCN 132
>sp|Q03751|CSP_DROME Cysteine string protein gi|157129|gb|AAA28432.1| csp32
Length = 249
Score = 35.0 bits (79), Expect = 0.24
Identities = 14/36 (38%), Positives = 17/36 (46%)
Frame = +3
Query: 219 VTFIYGVTDGDISVIATSTFHITLCECCCCCTCCRN 326
V + VT + + IT C CCCCC CC N
Sbjct: 97 VNAYFVVTSPAVKAVVICCAVITGCCCCCCCCCCCN 132
>ref|NP_730713.1| Cysteine string protein CG6395-PB gi|3047002|gb|AAD09428.1|
cysteine string protein 1 [Drosophila melanogaster]
gi|7296532|gb|AAF51816.1| CG6395-PB [Drosophila
melanogaster]
Length = 249
Score = 35.0 bits (79), Expect = 0.24
Identities = 14/36 (38%), Positives = 17/36 (46%)
Frame = +3
Query: 219 VTFIYGVTDGDISVIATSTFHITLCECCCCCTCCRN 326
V + VT + + IT C CCCCC CC N
Sbjct: 97 VNAYFVVTSPAVKAVVICCAVITGCCCCCCCCCCCN 132
>ref|NP_730714.2| Cysteine string protein CG6395-PC gi|3047004|gb|AAD09430.1|
cysteine string protein 2 [Drosophila melanogaster]
gi|28380625|gb|AAN12195.2| CG6395-PC [Drosophila
melanogaster]
Length = 228
Score = 35.0 bits (79), Expect = 0.24
Identities = 14/36 (38%), Positives = 17/36 (46%)
Frame = +3
Query: 219 VTFIYGVTDGDISVIATSTFHITLCECCCCCTCCRN 326
V + VT + + IT C CCCCC CC N
Sbjct: 97 VNAYFVVTSPAVKAVVICCAVITGCCCCCCCCCCCN 132
>gb|AAK14805.1| organic solute transporter alpha [Raja erinacea]
Length = 352
Score = 34.7 bits (78), Expect = 0.31
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 213 IVVTFIYGVTDGDISVIATSTFHITLCECCCCCTCCRN*H 332
+++ YG + + +AT T I+ CCCCC C + H
Sbjct: 127 LIIVQGYGGEEAMLQHLATHTIRISTGPCCCCCPCLPHIH 166
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 254,514,436
Number of Sequences: 1393205
Number of extensions: 4310383
Number of successful extensions: 14539
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 11617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13745
length of database: 448,689,247
effective HSP length: 97
effective length of database: 313,548,362
effective search space used: 7525160688
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
