Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015252A_C01 KMC015252A_c01
(658 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA75092.1| 3-deoxy-D-arabino-heptulosonate 7-phosphate synt... 327 1e-88
pir||T14898 probable 2-dehydro-3-deoxy-phosphoheptonate aldolase... 326 2e-88
gb|AAM65197.1| 2-dehydro-3-deoxyphosphoheptonate aldolase [Arabi... 323 1e-87
ref|NP_195077.1| 2-dehydro-3-deoxyphosphoheptonate aldolase; pro... 323 1e-87
sp|P37216|AROG_LYCES Phospho-2-dehydro-3-deoxyheptonate aldolase... 322 3e-87
>emb|CAA75092.1| 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Morinda
citrifolia]
Length = 535
Score = 327 bits (837), Expect = 1e-88
Identities = 164/222 (73%), Positives = 183/222 (81%), Gaps = 4/222 (1%)
Frame = +2
Query: 5 PSSLIAFNLKPSLSTPPQRRRSFVVSSSAASAPI----STAWNVESWRQKKAVQLPEYPD 172
P S + KP TPP S V + SAP+ W +ESW+ KKA+QLPEYPD
Sbjct: 44 PISAVHAADKPQKPTPPSATVSSAVPT--VSAPVVKIPEKKWTLESWKTKKALQLPEYPD 101
Query: 173 QTELDQVLETLSTFPPIVFAGEARSLEEKLAQAAMGNAFLLQGGDCAESFKEFSANNIRD 352
Q EL+ VL+TL +FPPIVFAGEARSLEE+LA+AAMGNAFLLQGGDCAESFKEF+ANNIRD
Sbjct: 102 QVELESVLKTLDSFPPIVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRD 161
Query: 353 TFRLILQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDAFEEKNGVKLPSYRGDNVNGDTFD 532
TFR++LQMG VLMFGGQMP+IKVGRMAGQFAKPRS+ FEEKNGVKLPSYRGDNVNGD FD
Sbjct: 162 TFRILLQMGAVLMFGGQMPVIKVGRMAGQFAKPRSEPFEEKNGVKLPSYRGDNVNGDAFD 221
Query: 533 AASRIPDPKRMIRAYTQSVATLNLLRAFATGGYAAMQRVNEW 658
A SR PDP+RMIRAY Q+ ATLNLLRAFATGGYAAMQRV +W
Sbjct: 222 AKSRAPDPQRMIRAYCQAAATLNLLRAFATGGYAAMQRVTQW 263
>pir||T14898 probable 2-dehydro-3-deoxy-phosphoheptonate aldolase (EC 4.1.2.15)
2, chloroplast - parsley gi|2352925|gb|AAB69320.1|
plastidic 3-deoxy-D-arabino-heptulosonate 7-phosphate
synthase 2 [Petroselinum crispum]
Length = 547
Score = 326 bits (835), Expect = 2e-88
Identities = 161/214 (75%), Positives = 179/214 (83%), Gaps = 5/214 (2%)
Frame = +2
Query: 32 KPSLSTPPQRRRSFVVSSSAASAP-----ISTAWNVESWRQKKAVQLPEYPDQTELDQVL 196
K S +T + SSS A+AP +ST WN+ESW+ KKA+QLPEYPD+ EL VL
Sbjct: 60 KLSKTTSSSTAAAAASSSSVAAAPAVTKQVSTKWNIESWKTKKALQLPEYPDKEELQSVL 119
Query: 197 ETLSTFPPIVFAGEARSLEEKLAQAAMGNAFLLQGGDCAESFKEFSANNIRDTFRLILQM 376
ETL FPP+VFAGEAR LEEKL +AAMGNAFLLQGGDCAESFKEF+ANNIRDTFR++LQM
Sbjct: 120 ETLDAFPPLVFAGEARHLEEKLGEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRILLQM 179
Query: 377 GVVLMFGGQMPIIKVGRMAGQFAKPRSDAFEEKNGVKLPSYRGDNVNGDTFDAASRIPDP 556
G VLMFGGQMP+IKVGRMAGQFAKPRSD FEEK+GVKLPSYRGDNVNGD FD SR PDP
Sbjct: 180 GAVLMFGGQMPVIKVGRMAGQFAKPRSDGFEEKDGVKLPSYRGDNVNGDAFDLKSRTPDP 239
Query: 557 KRMIRAYTQSVATLNLLRAFATGGYAAMQRVNEW 658
+R+IRAY QS ATLNLLRAFATGGYAAMQRV +W
Sbjct: 240 QRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQW 273
>gb|AAM65197.1| 2-dehydro-3-deoxyphosphoheptonate aldolase [Arabidopsis thaliana]
Length = 507
Score = 323 bits (828), Expect = 1e-87
Identities = 153/191 (80%), Positives = 174/191 (90%)
Frame = +2
Query: 86 SAASAPISTAWNVESWRQKKAVQLPEYPDQTELDQVLETLSTFPPIVFAGEARSLEEKLA 265
S SA S W++ESW+ KKA+QLP+YPDQ ++D VL+TLS+FPPIVFAGEAR LE+KL
Sbjct: 42 STQSASASVKWSLESWKSKKALQLPDYPDQKDVDSVLQTLSSFPPIVFAGEARKLEDKLG 101
Query: 266 QAAMGNAFLLQGGDCAESFKEFSANNIRDTFRLILQMGVVLMFGGQMPIIKVGRMAGQFA 445
QAAMG AF+LQGGDCAESFKEF+ANNIRDTFR++LQMGVVLMFGGQ+P+IKVGRMAGQFA
Sbjct: 102 QAAMGQAFMLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQLPVIKVGRMAGQFA 161
Query: 446 KPRSDAFEEKNGVKLPSYRGDNVNGDTFDAASRIPDPKRMIRAYTQSVATLNLLRAFATG 625
KPRSD FEEK+GVKLPSYRGDN+NGD FD SRIPDP RM+RAYTQSVATLNLLRAFATG
Sbjct: 162 KPRSDPFEEKDGVKLPSYRGDNINGDAFDEKSRIPDPHRMVRAYTQSVATLNLLRAFATG 221
Query: 626 GYAAMQRVNEW 658
GYAAMQRV++W
Sbjct: 222 GYAAMQRVSQW 232
>ref|NP_195077.1| 2-dehydro-3-deoxyphosphoheptonate aldolase; protein id:
At4g33510.1, supported by cDNA: 37432., supported by
cDNA: gi_13605634, supported by cDNA: gi_166689
[Arabidopsis thaliana] gi|21264400|sp|Q00218|AROG_ARATH
Phospho-2-dehydro-3-deoxyheptonate aldolase 2,
chloroplast precursor (Phospho-2-keto-3-deoxyheptonate
aldolase 2) (DAHP synthetase 2)
(3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 2)
gi|7484778|pir||T06002
2-dehydro-3-deoxy-phosphoheptonate aldolase (EC
4.1.2.15) 2 - Arabidopsis thaliana
gi|4490318|emb|CAB38809.1|
2-dehydro-3-deoxyphosphoheptonate aldolase [Arabidopsis
thaliana] gi|7270299|emb|CAB80068.1|
2-dehydro-3-deoxyphosphoheptonate aldolase [Arabidopsis
thaliana] gi|13605635|gb|AAK32811.1|AF361798_1
AT4g33510/F17M5_270 [Arabidopsis thaliana]
gi|21700887|gb|AAM70567.1| AT4g33510/F17M5_270
[Arabidopsis thaliana]
Length = 507
Score = 323 bits (828), Expect = 1e-87
Identities = 153/191 (80%), Positives = 174/191 (90%)
Frame = +2
Query: 86 SAASAPISTAWNVESWRQKKAVQLPEYPDQTELDQVLETLSTFPPIVFAGEARSLEEKLA 265
S SA S W++ESW+ KKA+QLP+YPDQ ++D VL+TLS+FPPIVFAGEAR LE+KL
Sbjct: 42 STQSASASVKWSLESWKSKKALQLPDYPDQKDVDSVLQTLSSFPPIVFAGEARKLEDKLG 101
Query: 266 QAAMGNAFLLQGGDCAESFKEFSANNIRDTFRLILQMGVVLMFGGQMPIIKVGRMAGQFA 445
QAAMG AF+LQGGDCAESFKEF+ANNIRDTFR++LQMGVVLMFGGQ+P+IKVGRMAGQFA
Sbjct: 102 QAAMGQAFMLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQLPVIKVGRMAGQFA 161
Query: 446 KPRSDAFEEKNGVKLPSYRGDNVNGDTFDAASRIPDPKRMIRAYTQSVATLNLLRAFATG 625
KPRSD FEEK+GVKLPSYRGDN+NGD FD SRIPDP RM+RAYTQSVATLNLLRAFATG
Sbjct: 162 KPRSDPFEEKDGVKLPSYRGDNINGDAFDEKSRIPDPHRMVRAYTQSVATLNLLRAFATG 221
Query: 626 GYAAMQRVNEW 658
GYAAMQRV++W
Sbjct: 222 GYAAMQRVSQW 232
>sp|P37216|AROG_LYCES Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplast
precursor (Phospho-2-keto-3-deoxyheptonate aldolase 2)
(DAHP synthetase 2) (3-deoxy-D-arabino-heptulosonate
7-phosphate synthase 2) gi|542033|pir||S40412
2-dehydro-3-deoxy-phosphoheptonate aldolase (EC
4.1.2.15) 2 precursor - tomato gi|410488|emb|CAA79856.1|
phospho-2-dehydro-3-deoxyheptonate aldolase
[Lycopersicon esculentum]
Length = 541
Score = 322 bits (825), Expect = 3e-87
Identities = 156/209 (74%), Positives = 179/209 (85%)
Frame = +2
Query: 32 KPSLSTPPQRRRSFVVSSSAASAPISTAWNVESWRQKKAVQLPEYPDQTELDQVLETLST 211
KP+ S+PP + +++ A A T W V+SW+ KKA+QLPEYPDQ EL VL+T+
Sbjct: 65 KPTKSSPP----AATATTAPAPAVTKTEWAVDSWKSKKALQLPEYPDQEELRSVLKTIDE 120
Query: 212 FPPIVFAGEARSLEEKLAQAAMGNAFLLQGGDCAESFKEFSANNIRDTFRLILQMGVVLM 391
FPPIVFAGEARSLEE+L +AAMG AFLLQGGDCAESFKEF+ANNIRDTFR++LQMG VLM
Sbjct: 121 FPPIVFAGEARSLEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLM 180
Query: 392 FGGQMPIIKVGRMAGQFAKPRSDAFEEKNGVKLPSYRGDNVNGDTFDAASRIPDPKRMIR 571
FGGQMP+IKVGRMAGQFAKPRSD+FEEK+GVKLPSYRGDNVNGD FD SR PDP+R+IR
Sbjct: 181 FGGQMPVIKVGRMAGQFAKPRSDSFEEKDGVKLPSYRGDNVNGDAFDVKSRTPDPQRLIR 240
Query: 572 AYTQSVATLNLLRAFATGGYAAMQRVNEW 658
AY QS ATLNLLRAFATGGYAAMQR+N+W
Sbjct: 241 AYCQSAATLNLLRAFATGGYAAMQRINQW 269
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 637,744,524
Number of Sequences: 1393205
Number of extensions: 15380175
Number of successful extensions: 54806
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 50971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54723
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 28006887348
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
