Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015018A_C01 KMC015018A_c01
(555 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T18535 high molecular mass nuclear antigen - chicken (fragm... 45 6e-04
ref|ZP_00066061.1| hypothetical protein [Microbulbifer degradans... 44 0.001
ref|ZP_00065777.1| hypothetical protein [Microbulbifer degradans... 44 0.001
ref|NP_611214.1| CG14478-PB [Drosophila melanogaster] gi|2465441... 44 0.002
gb|EAA00026.1| agCP9374 [Anopheles gambiae str. PEST] 44 0.002
>pir||T18535 high molecular mass nuclear antigen - chicken (fragment)
gi|2754696|dbj|BAA24137.1| high molecular mass nuclear
antigen [Gallus gallus]
Length = 1151
Score = 45.1 bits (105), Expect = 6e-04
Identities = 28/59 (47%), Positives = 35/59 (58%)
Frame = -3
Query: 499 SLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATAPVVHRCVHQMSPPTAYPV 323
S S S+SSSSS+SS+SS SSSSS S + S + N + AP V QM+P A V
Sbjct: 1037 SSSSSSSSSSSSSSSSSSSSSSSSDSDSSSSSSESNPASPAPAVGDGQQQMTPGAAQSV 1095
>ref|ZP_00066061.1| hypothetical protein [Microbulbifer degradans 2-40]
Length = 733
Score = 44.3 bits (103), Expect = 0.001
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTV 386
SS+ S+ S S S+SSSSS+SS+SS SSSSS SQ G GSG TV
Sbjct: 101 SSSSSSSSSTSSSSSSSSSSSSSSSSSSSSSSSGSSQAGCGSGGGATV 148
Score = 39.3 bits (90), Expect = 0.033
Identities = 24/54 (44%), Positives = 33/54 (60%)
Frame = -3
Query: 544 LPPQRSSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVA 383
+P SS+ ST S S S+SSSS++SS+SS SSSSS S + S ++ A
Sbjct: 85 IPSDGSSSTSSTSSTSSSSSSSSSSTSSSSSSSSSSSSSSSSSSSSSSSGSSQA 138
Score = 38.1 bits (87), Expect = 0.073
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATAPVVH 365
SS+ S+ S S S+SSSSS+SS+SS SS + C GG + + TA ++
Sbjct: 106 SSSSTSSSSSSSSSSSSSSSSSSSSSSSGSSQAGCGSGGGATVCLSATDTASAIN 160
Score = 33.9 bits (76), Expect = 1.4
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -3
Query: 538 PQRSSNKVSTPHPSLSKSAS----SSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
P +S+ + S P S ++S SSSS+SS+SS SSSSS S + S ++ +++
Sbjct: 76 PAKSAKECSIPSDGSSSTSSTSSTSSSSSSSSSSTSSSSSSSSSSSSSSSSSSSSSSS 133
>ref|ZP_00065777.1| hypothetical protein [Microbulbifer degradans 2-40]
Length = 584
Score = 44.3 bits (103), Expect = 0.001
Identities = 35/117 (29%), Positives = 52/117 (43%), Gaps = 1/117 (0%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATAPVVHRCVHQ 350
SS+ S+ S S S+SSSSSTSS+SS SSSSS S + S ++ + V+ +
Sbjct: 305 SSSTSSSSSSSSSSSSSSSSSTSSSSSSSSSSSSSSSSSSSSSSSSSSSGGGVIFSADFE 364
Query: 349 MSPPTAYPVGVEQSFR-RNNIPLPRQGYHGQGNGGHSYLIHNGNHWQKD*EAVLIKR 182
+ P G + R N P P G ++ +N H+ +I R
Sbjct: 365 SDSDSTQPAGWDNFIGWRQNGPNPNGSTFALVESGRAHSGNNAVHFSGGASPAMIAR 421
Score = 40.4 bits (93), Expect = 0.015
Identities = 24/51 (47%), Positives = 33/51 (64%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
SS+ S+ S S S+SSSSSTSS+SS SSSSS S T S ++ +++
Sbjct: 271 SSSSSSSSSSSTSSSSSSSSSTSSSSSSSSSSSSSSSTSSSSSSSSSSSSS 321
Score = 38.9 bits (89), Expect = 0.043
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
SS+ S+ S S S+SSSSS+SS+SS SSSSS S T S ++ +++
Sbjct: 255 SSSSSSSTGSSSSSSSSSSSSSSSSSSTSSSSSSSSSTSSSSSSSSSSSSS 305
Score = 37.7 bits (86), Expect = 0.095
Identities = 22/45 (48%), Positives = 28/45 (61%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQR 395
SS+ S+ S S S+SSSSS+S+ S SSSSS S G G Q+
Sbjct: 164 SSSSSSSTGSSTSSSSSSSSSSSTGGSTSSSSSSSSTGGNGGAQQ 208
Score = 37.0 bits (84), Expect = 0.16
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
SS+ S+ S S S+SSS+S+SS+SS SSSSS S T S ++ +++
Sbjct: 289 SSSTSSSSSSSSSSSSSSSTSSSSSSSSSSSSSSSSSTSSSSSSSSSSSSS 339
Score = 36.6 bits (83), Expect = 0.21
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
SS+ ST S S S+SSSSS+SS+S+ SSSSS S + S ++ +++
Sbjct: 256 SSSSSSTGSSSSSSSSSSSSSSSSSSTSSSSSSSSSTSSSSSSSSSSSSSS 306
Score = 36.6 bits (83), Expect = 0.21
Identities = 21/43 (48%), Positives = 27/43 (61%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSG 401
SS+ S+ S + S+SSSSS+SS +SSSS S TGG G
Sbjct: 163 SSSSSSSSTGSSTSSSSSSSSSSSTGGSTSSSSSSSSTGGNGG 205
Score = 36.6 bits (83), Expect = 0.21
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
SS+ ST S S S+SSSSS++S+SS SSSSS S + S ++ +++
Sbjct: 286 SSSSSSTSSSSSSSSSSSSSSSTSSSSSSSSSSSSSSSSSTSSSSSSSSSS 336
Score = 36.6 bits (83), Expect = 0.21
Identities = 22/51 (43%), Positives = 32/51 (62%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
SS+ S+ S S S SSSSS+SS+SS SSSSS S + S ++ +++
Sbjct: 293 SSSSSSSSSSSSSSSTSSSSSSSSSSSSSSSSSTSSSSSSSSSSSSSSSSS 343
Score = 36.6 bits (83), Expect = 0.21
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
SS+ S+ S S S+SSSSS+S++SS SSSSS S + S ++ +T+
Sbjct: 259 SSSTGSSSSSSSSSSSSSSSSSSTSSSSSSSSSTSSSSSSSSSSSSSSSTS 309
Score = 36.6 bits (83), Expect = 0.21
Identities = 21/51 (41%), Positives = 32/51 (62%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
S+ S+ S S S+SSSSSTSS+SS SSS+S S + S ++ +++
Sbjct: 261 STGSSSSSSSSSSSSSSSSSSTSSSSSSSSSTSSSSSSSSSSSSSSSTSSS 311
Score = 36.6 bits (83), Expect = 0.21
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
SS+ ++ S S S+SSSSSTSS+SS SSSSS S + S ++ +++
Sbjct: 287 SSSSSTSSSSSSSSSSSSSSSTSSSSSSSSSSSSSSSSSTSSSSSSSSSSS 337
Score = 36.6 bits (83), Expect = 0.21
Identities = 21/51 (41%), Positives = 32/51 (62%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
S++ S+ S S S+SSSSS+SS+SS SSSSS S + S + +++
Sbjct: 281 STSSSSSSSSSTSSSSSSSSSSSSSSSTSSSSSSSSSSSSSSSSSTSSSSS 331
Score = 36.2 bits (82), Expect = 0.28
Identities = 21/51 (41%), Positives = 33/51 (64%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
SS+ S+ S S S+S+SSS+SS+SS SSSSS S + S ++ +++
Sbjct: 265 SSSSSSSSSSSSSSSSSTSSSSSSSSSTSSSSSSSSSSSSSSSTSSSSSSS 315
Score = 36.2 bits (82), Expect = 0.28
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -3
Query: 493 SKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNT 389
S S+SSSSST S++S SSSSS S TGG + ++
Sbjct: 162 SSSSSSSSSTGSSTSSSSSSSSSSSTGGSTSSSSS 196
Score = 35.8 bits (81), Expect = 0.36
Identities = 21/51 (41%), Positives = 33/51 (64%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
SS+ S+ S S S+SSSS++SS+SS SSSSS S + S ++ +++
Sbjct: 288 SSSSTSSSSSSSSSSSSSSSTSSSSSSSSSSSSSSSSSTSSSSSSSSSSSS 338
Score = 35.8 bits (81), Expect = 0.36
Identities = 21/51 (41%), Positives = 32/51 (62%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
SS S+ S + S+SSSSS+SS+SS +SSSS S + S +T +++
Sbjct: 280 SSTSSSSSSSSSTSSSSSSSSSSSSSSSTSSSSSSSSSSSSSSSSSTSSSS 330
Score = 35.8 bits (81), Expect = 0.36
Identities = 21/51 (41%), Positives = 33/51 (64%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
SS+ S+ S S S+SSSSS+SS+SS S+SSS S + S ++ +++
Sbjct: 279 SSSTSSSSSSSSSTSSSSSSSSSSSSSSSTSSSSSSSSSSSSSSSSSTSSS 329
Score = 35.8 bits (81), Expect = 0.36
Identities = 21/51 (41%), Positives = 32/51 (62%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
SS+ ++ S S S SSSSS+SS+SS SSS+S S + S ++ +T+
Sbjct: 277 SSSSSTSSSSSSSSSTSSSSSSSSSSSSSSSTSSSSSSSSSSSSSSSSSTS 327
Score = 35.8 bits (81), Expect = 0.36
Identities = 21/51 (41%), Positives = 33/51 (64%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
SS+ S+ S S S+S+SSS+SS+SS SSSSS S + S ++ +++
Sbjct: 275 SSSSSSSTSSSSSSSSSTSSSSSSSSSSSSSSSTSSSSSSSSSSSSSSSSS 325
Score = 35.4 bits (80), Expect = 0.47
Identities = 21/51 (41%), Positives = 33/51 (64%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
SS+ S+ S S S+SSSSS+SS++S SSSSS S + S ++ +++
Sbjct: 283 SSSSSSSSSTSSSSSSSSSSSSSSSTSSSSSSSSSSSSSSSSSTSSSSSSS 333
Score = 35.4 bits (80), Expect = 0.47
Identities = 21/51 (41%), Positives = 33/51 (64%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
SS+ S+ S S S+SSSSS+SS+SS SSS+S S + S ++ +++
Sbjct: 295 SSSSSSSSSSSSSTSSSSSSSSSSSSSSSSSTSSSSSSSSSSSSSSSSSSS 345
Score = 35.0 bits (79), Expect = 0.61
Identities = 20/43 (46%), Positives = 29/43 (66%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSG 401
SS+ S+ S S+SSSSS+SS++ S+SSS S + GG+G
Sbjct: 162 SSSSSSSSSTGSSTSSSSSSSSSSSTGGSTSSSSSSSSTGGNG 204
Score = 34.7 bits (78), Expect = 0.80
Identities = 21/51 (41%), Positives = 33/51 (64%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
SS+ S+ S S S+SSSSS+S++SS SSSSS S + S ++ +++
Sbjct: 269 SSSSSSSSSSSSSTSSSSSSSSSTSSSSSSSSSSSSSSSTSSSSSSSSSSS 319
Score = 34.7 bits (78), Expect = 0.80
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
SS+ S+ S S S+SSSSS+S++SS SSSSS S + + ++ +++
Sbjct: 285 SSSSSSSTSSSSSSSSSSSSSSSTSSSSSSSSSSSSSSSSSTSSSSSSSSS 335
Score = 34.7 bits (78), Expect = 0.80
Identities = 21/51 (41%), Positives = 32/51 (62%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
SS+ S+ S S ++SSSSS+SS SS SSSSS S + S ++ +++
Sbjct: 268 SSSSSSSSSSSSSSTSSSSSSSSSTSSSSSSSSSSSSSSSTSSSSSSSSSS 318
Score = 34.7 bits (78), Expect = 0.80
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
SS+ S+ S S S+SSS+S+SS+SS SSSSS + + S ++ +++
Sbjct: 273 SSSSSSSSSTSSSSSSSSSTSSSSSSSSSSSSSSSTSSSSSSSSSSSSSSS 323
Score = 34.7 bits (78), Expect = 0.80
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
SS+ S+ S S ++SSSSS+SS+SS SSSS+ S + S ++ +++
Sbjct: 294 SSSSSSSSSSSSSSTSSSSSSSSSSSSSSSSSTSSSSSSSSSSSSSSSSSS 344
Score = 34.7 bits (78), Expect = 0.80
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
+S+ S+ S S S++SSSS+SS+SS SSSSS S + S ++ +++
Sbjct: 292 TSSSSSSSSSSSSSSSTSSSSSSSSSSSSSSSSSTSSSSSSSSSSSSSSSS 342
Score = 34.3 bits (77), Expect = 1.0
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
SS+ S+ S S S SSSSS+SS++S SSSSS S + + ++ +++
Sbjct: 267 SSSSSSSSSSSSSSSTSSSSSSSSSTSSSSSSSSSSSSSSSTSSSSSSSSS 317
Score = 34.3 bits (77), Expect = 1.0
Identities = 21/51 (41%), Positives = 33/51 (64%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
SS+ S+ S S S+SSSSS+SS+SS +SSSS S + S ++ +++
Sbjct: 254 SSSSSSSSTGSSSSSSSSSSSSSSSSSSTSSSSSSSSSTSSSSSSSSSSSS 304
Score = 34.3 bits (77), Expect = 1.0
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
SS+ S+ + S S+SSSS++SS+SS SSSSS S + S ++ +++
Sbjct: 272 SSSSSSSSSSTSSSSSSSSSTSSSSSSSSSSSSSSSTSSSSSSSSSSSSSS 322
Score = 33.9 bits (76), Expect = 1.4
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
SS+ S+ S + S+SSSSS++S+SS SSSSS S + S ++ +++
Sbjct: 270 SSSSSSSSSSSSTSSSSSSSSSTSSSSSSSSSSSSSSSTSSSSSSSSSSSS 320
Score = 33.5 bits (75), Expect = 1.8
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
S++ S+ S S S+S+SSS+SS+SS SSSSS + + S ++ +++
Sbjct: 291 STSSSSSSSSSSSSSSSTSSSSSSSSSSSSSSSSSTSSSSSSSSSSSSSSS 341
Score = 33.5 bits (75), Expect = 1.8
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
+S+ S+ + S S+SSSSS+SS+S+ SSSSS S + S ++ +++
Sbjct: 282 TSSSSSSSSSTSSSSSSSSSSSSSSSTSSSSSSSSSSSSSSSSSTSSSSSS 332
Score = 33.5 bits (75), Expect = 1.8
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
SS+ S+ S S+SSSSS+SS+SS S+SSS S + S ++ +++
Sbjct: 253 SSSSSSSSSTGSSSSSSSSSSSSSSSSSSTSSSSSSSSSTSSSSSSSSSSS 303
Score = 32.7 bits (73), Expect = 3.0
Identities = 19/37 (51%), Positives = 23/37 (61%)
Frame = -3
Query: 499 SLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNT 389
S S S+S+ SSTSS+SS SSSSS T S +T
Sbjct: 164 SSSSSSSTGSSTSSSSSSSSSSSTGGSTSSSSSSSST 200
Score = 32.7 bits (73), Expect = 3.0
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = -3
Query: 526 SNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
S+ S+ S S S+SSS+S+SS+SS S+SSS S + S + +++
Sbjct: 264 SSSSSSSSSSSSSSSSSSTSSSSSSSSSTSSSSSSSSSSSSSSSTSSSSS 313
Score = 32.3 bits (72), Expect = 4.0
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = -3
Query: 529 SSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATA 377
SS+ + S S S+SSSSS+SS++S SSSSS + + S ++ +++
Sbjct: 257 SSSSSTGSSSSSSSSSSSSSSSSSSTSSSSSSSSSTSSSSSSSSSSSSSSS 307
Score = 32.0 bits (71), Expect = 5.2
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = -3
Query: 499 SLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVAT 380
S S S+SSSS+ SS SS SSSSS S G S ++ +T
Sbjct: 161 SSSSSSSSSSTGSSTSSSSSSSSSSSTGGSTSSSSSSSST 200
>ref|NP_611214.1| CG14478-PB [Drosophila melanogaster] gi|24654414|ref|NP_725678.1|
CG14478-PA [Drosophila melanogaster]
gi|7302784|gb|AAF57859.1| CG14478-PA [Drosophila
melanogaster] gi|21645229|gb|AAF57860.2| CG14478-PB
[Drosophila melanogaster]
Length = 512
Score = 43.5 bits (101), Expect = 0.002
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Frame = -3
Query: 520 KVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATAPVV--HRCVHQM 347
+ S + S SASSSSS+SSASS SSSSS S + + T P++ + ++
Sbjct: 247 RASAASTAPSSSASSSSSSSSASSSSSSSSSSSSASSSANCAKKLKTEPILSQYNQTERL 306
Query: 346 SPPTAYPVGVEQSFRRNNIPLPRQGYHGQGNGGHSYLIHNGNHWQK 209
+ Y V E+ +RR R+ ++ G G SY H+ ++++
Sbjct: 307 NFANTYIVWSEEHWRRVVFHDERR-FNLDGPDGFSYYFHDLRNYER 351
>gb|EAA00026.1| agCP9374 [Anopheles gambiae str. PEST]
Length = 643
Score = 43.5 bits (101), Expect = 0.002
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = -3
Query: 550 VFLPPQRSSNKVSTPHPSLSKSASSSSSTSSASSVSSSSS 431
+ LPP S+ ++ P PS S S+SSSSS+SS+SS+SSSSS
Sbjct: 602 MLLPPTPSTPTLAPPTPSSSSSSSSSSSSSSSSSLSSSSS 641
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 553,371,819
Number of Sequences: 1393205
Number of extensions: 14061987
Number of successful extensions: 145531
Number of sequences better than 10.0: 1399
Number of HSP's better than 10.0 without gapping: 77060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 123350
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19521267756
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
