Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015014A_C01 KMC015014A_c01
(472 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_010601.1| inositol polyphosphate kinase; Ipk1p [Saccharom... 32 3.3
ref|NP_033858.1| ATPase, class V, type 10A; ATPase, class 5; ATP... 32 4.4
gb|AAC02902.1| putative E1-E2 ATPase [Mus musculus] 32 4.4
ref|NP_268648.1| conserved hypothetical protein [Streptococcus p... 30 9.7
gb|AAF70465.1|AF247973_1 3-hydroxy-3-methylglutaryl-coenzyme A r... 30 9.7
>ref|NP_010601.1| inositol polyphosphate kinase; Ipk1p [Saccharomyces cerevisiae]
gi|2131425|pir||S61201 hypothetical protein YDR315c -
yeast (Saccharomyces cerevisiae)
gi|849229|gb|AAB64751.1| Ydr315cp [Saccharomyces
cerevisiae]
Length = 281
Score = 32.0 bits (71), Expect = 3.3
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +2
Query: 146 DLQQYFKKNT*PLQDFSSLQDISQERSFLLLLKLFSKTMNDKIMSKKNQLSLGNIAAIYR 325
DLQ+ KNT P+ D S+ D++ E LLL+ L T + S +N L + I +
Sbjct: 197 DLQKKLTKNTTPISDIKSINDVNDEH--LLLMTLRDVTCFIEWNSAENALHVNIIDVDLK 254
Query: 326 P 328
P
Sbjct: 255 P 255
>ref|NP_033858.1| ATPase, class V, type 10A; ATPase, class 5; ATPase 10A, class V
[Mus musculus] gi|8134333|sp|O54827|A10A_MOUSE Potential
phospholipid-transporting ATPase VA
gi|6457270|gb|AAF09447.1|AF156549_1 putative E1-E2
ATPase [Mus musculus]
Length = 1508
Score = 31.6 bits (70), Expect = 4.4
Identities = 22/77 (28%), Positives = 34/77 (43%), Gaps = 12/77 (15%)
Frame = -2
Query: 285 FLLIILSFIVLLKSFSKRRK-----LLSWLISCREEKSCKG*VF-------FLKYCCRSL 142
F+L + + L + +S+ R L L+ REEK + F++ CC +
Sbjct: 121 FILAVTAIKDLWEDYSRHRSDHEINHLGCLVFSREEKKYVNRYWKEIRVGDFVRLCCNEI 180
Query: 141 SPHFILILPSKTADGFC 91
P IL+L S DG C
Sbjct: 181 IPADILLLSSSDPDGLC 197
>gb|AAC02902.1| putative E1-E2 ATPase [Mus musculus]
Length = 420
Score = 31.6 bits (70), Expect = 4.4
Identities = 22/77 (28%), Positives = 34/77 (43%), Gaps = 12/77 (15%)
Frame = -2
Query: 285 FLLIILSFIVLLKSFSKRRK-----LLSWLISCREEKSCKG*VF-------FLKYCCRSL 142
F+L + + L + +S+ R L L+ REEK + F++ CC +
Sbjct: 106 FILAVTAIKDLWEDYSRHRSDHEINHLGCLVFSREEKKYVNRYWKEIRVGDFVRLCCNEI 165
Query: 141 SPHFILILPSKTADGFC 91
P IL+L S DG C
Sbjct: 166 IPADILLLSSSDPDGLC 182
>ref|NP_268648.1| conserved hypothetical protein [Streptococcus pyogenes]
gi|19745429|ref|NP_606565.1| conserved hypothetical
protein [Streptococcus pyogenes MGAS8232]
gi|21909761|ref|NP_664029.1| conserved hypothetical
protein [Streptococcus pyogenes MGAS315]
gi|28896547|ref|NP_802897.1| conserved hypothetical
protein [Streptococcus pyogenes SSI-1]
gi|13621573|gb|AAK33369.1| conserved hypothetical
protein [Streptococcus pyogenes M1 GAS]
gi|19747541|gb|AAL97064.1| conserved hypothetical
protein [Streptococcus pyogenes MGAS8232]
gi|21903946|gb|AAM78832.1| conserved hypothetical
protein [Streptococcus pyogenes MGAS315]
gi|28811801|dbj|BAC64730.1| conserved hypothetical
protein [Streptococcus pyogenes SSI-1]
Length = 102
Score = 30.4 bits (67), Expect = 9.7
Identities = 15/52 (28%), Positives = 33/52 (62%)
Frame = +3
Query: 69 KLLVLLLYKNHQQSLRAGSK*NEGKVTCNSILRRTPNLYRIFLLYKISAKRE 224
+L+ + L +N + + ++ E ++ C+++L+ + RI +LYK+SAK+E
Sbjct: 44 ELIKVTLLQNTDEDIHEVAEILEEEIGCDTVLK----IGRILILYKVSAKKE 91
>gb|AAF70465.1|AF247973_1 3-hydroxy-3-methylglutaryl-coenzyme A reductase [Giardia
intestinalis]
Length = 637
Score = 30.4 bits (67), Expect = 9.7
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Frame = +2
Query: 110 FEGRIKIK*GESDLQQYFK-KNT*PLQDFS--SLQDISQERSFLLLLKLFSKTMNDKIMS 280
+E ++ + GESDL +YF P+++ SL+ S +R L KL S+T+ D++ +
Sbjct: 484 YEAKMMLTNGESDLYRYFSPAKLSPVRNLQQPSLRMQSPKRQSYALEKLASQTLLDRVRT 543
Query: 281 KKNQLSLG-------NIAAIYRPSIVS 340
+ LS A+ ++P+++S
Sbjct: 544 RSPILSQSISSDSPFGAASTHQPTVLS 570
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 382,038,991
Number of Sequences: 1393205
Number of extensions: 7532491
Number of successful extensions: 12637
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12637
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 12524054526
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
