Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014855A_C01 KMC014855A_c01
(522 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA94532.2| unnamed protein product [Oryza sativa (japonica ... 127 8e-29
gb|AAO69667.1| vacuolar ATPase subunit E [Phaseolus acutifolius] 125 3e-28
dbj|BAB85263.1| putative YLP [Oryza sativa (japonica cultivar-gr... 124 7e-28
sp|Q9MB46|VATE_CITUN Vacuolar ATP synthase subunit E (V-ATPase E... 121 6e-27
sp|Q9SWE7|VATE_CITLI Vacuolar ATP synthase subunit E (V-ATPase E... 121 6e-27
>dbj|BAA94532.2| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 230
Score = 127 bits (319), Expect = 8e-29
Identities = 60/74 (81%), Positives = 66/74 (89%)
Frame = -1
Query: 519 KANVNQPEIIVDHNIYLPSAPSHYESHEPYCSGGVVLASRDGKIVCENTLDARLDVVFRK 340
KAN+ PEI+VD N+YLP APSHYE+H P CSGGVVLASRDGKIVCENTLDARL+VVFRK
Sbjct: 156 KANIYPPEIMVDRNVYLPPAPSHYEAHGPSCSGGVVLASRDGKIVCENTLDARLEVVFRK 215
Query: 339 KLPEIRKQLFGQVA 298
KLPEIR+ L GQVA
Sbjct: 216 KLPEIRRSLLGQVA 229
>gb|AAO69667.1| vacuolar ATPase subunit E [Phaseolus acutifolius]
Length = 224
Score = 125 bits (314), Expect = 3e-28
Identities = 59/73 (80%), Positives = 66/73 (89%)
Frame = -1
Query: 519 KANVNQPEIIVDHNIYLPSAPSHYESHEPYCSGGVVLASRDGKIVCENTLDARLDVVFRK 340
KAN++ PEIIVD+ +YLP PSH+ +H+ CSGGVVLASRDGKIVCENTLDARLDVVFRK
Sbjct: 150 KANIDPPEIIVDNQVYLPPGPSHHNAHDISCSGGVVLASRDGKIVCENTLDARLDVVFRK 209
Query: 339 KLPEIRKQLFGQV 301
KLPEIRKQLFGQV
Sbjct: 210 KLPEIRKQLFGQV 222
>dbj|BAB85263.1| putative YLP [Oryza sativa (japonica cultivar-group)]
Length = 230
Score = 124 bits (311), Expect = 7e-28
Identities = 58/73 (79%), Positives = 67/73 (91%)
Frame = -1
Query: 519 KANVNQPEIIVDHNIYLPSAPSHYESHEPYCSGGVVLASRDGKIVCENTLDARLDVVFRK 340
KA V+ PEI+VDH++YLP +PS ++SHE +CSGGVVLASRDGKIVCENTLDARL+VVFRK
Sbjct: 156 KAEVHHPEILVDHDVYLPPSPSSHDSHERFCSGGVVLASRDGKIVCENTLDARLEVVFRK 215
Query: 339 KLPEIRKQLFGQV 301
KLPEIRK LFGQV
Sbjct: 216 KLPEIRKLLFGQV 228
>sp|Q9MB46|VATE_CITUN Vacuolar ATP synthase subunit E (V-ATPase E subunit) (Vacuolar
proton pump E subunit) gi|6729085|dbj|BAA89661.1|
vacuolar H+-ATPase E subunit-1 [Citrus unshiu]
Length = 230
Score = 121 bits (303), Expect = 6e-27
Identities = 58/74 (78%), Positives = 63/74 (84%)
Frame = -1
Query: 519 KANVNQPEIIVDHNIYLPSAPSHYESHEPYCSGGVVLASRDGKIVCENTLDARLDVVFRK 340
K V+ PEIIVDH+IYLP P H+ +H P CSGGVV+ASRDGKIVCENTLDARLDVVFRK
Sbjct: 156 KLQVHPPEIIVDHHIYLPPGPGHHNAHGPSCSGGVVVASRDGKIVCENTLDARLDVVFRK 215
Query: 339 KLPEIRKQLFGQVA 298
KLPEIRKQL QVA
Sbjct: 216 KLPEIRKQLVSQVA 229
>sp|Q9SWE7|VATE_CITLI Vacuolar ATP synthase subunit E (V-ATPase E subunit) (Vacuolar
proton pump E subunit) (CLVE-1)
gi|5733660|gb|AAD49706.1| vacuolar V-H+ATPase subunit E
[Citrus limon]
Length = 230
Score = 121 bits (303), Expect = 6e-27
Identities = 58/74 (78%), Positives = 63/74 (84%)
Frame = -1
Query: 519 KANVNQPEIIVDHNIYLPSAPSHYESHEPYCSGGVVLASRDGKIVCENTLDARLDVVFRK 340
K V+ PEIIVDH+IYLP P H+ +H P CSGGVV+ASRDGKIVCENTLDARLDVVFRK
Sbjct: 156 KLQVHPPEIIVDHHIYLPPGPGHHNAHGPSCSGGVVVASRDGKIVCENTLDARLDVVFRK 215
Query: 339 KLPEIRKQLFGQVA 298
KLPEIRKQL QVA
Sbjct: 216 KLPEIRKQLVSQVA 229
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 465,550,508
Number of Sequences: 1393205
Number of extensions: 9794620
Number of successful extensions: 27873
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 27045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27859
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16731298976
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
