Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014766A_C01 KMC014766A_c01
(544 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_177556.1| unknown protein; protein id: At1g74160.1 [Arabi... 91 7e-18
ref|NP_173297.1| unknown protein; protein id: At1g18620.1, suppo... 85 6e-16
ref|NP_197062.1| putative protein; protein id: At5g15580.1 [Arab... 78 8e-14
gb|AAM64269.1| unknown [Arabidopsis thaliana] 63 3e-09
ref|NP_566165.2| expressed protein; protein id: At3g02170.1, sup... 63 3e-09
>ref|NP_177556.1| unknown protein; protein id: At1g74160.1 [Arabidopsis thaliana]
gi|25406317|pir||G96769 unknown protein F9E11.1
[imported] - Arabidopsis thaliana
gi|12323815|gb|AAG51874.1|AC079678_4 unknown protein;
20090-16103 [Arabidopsis thaliana]
Length = 1028
Score = 91.3 bits (225), Expect = 7e-18
Identities = 60/106 (56%), Positives = 74/106 (69%), Gaps = 2/106 (1%)
Frame = -3
Query: 542 RLTKKSLSAQKLLKELCFEIE--KVQAKKPGWCLELEGEEDDGLKSILWEDVMHEGSESW 369
++TKK++SAQ+LLKELC IE + QA K LE EEDD LKSIL EDV S +W
Sbjct: 923 KVTKKAVSAQQLLKELCSAIETQQKQATKRSENFLLE-EEDDFLKSILAEDVTIR-SGNW 980
Query: 368 KNFNGEIPGFVLDVERLIFKDLVGEIVIGEAASMRLKPSVRRRKLF 231
+F+GE+ G VLDVERL+FKDLV EIV E + ++ K S RRR LF
Sbjct: 981 ADFSGEMSGLVLDVERLVFKDLVNEIVHAETSRLQAK-SGRRRTLF 1025
>ref|NP_173297.1| unknown protein; protein id: At1g18620.1, supported by cDNA:
gi_20856608 [Arabidopsis thaliana]
gi|25518757|pir||H86319 hypothetical protein F26I16.4 -
Arabidopsis thaliana gi|9795593|gb|AAF98411.1|AC026238_3
Unknown protein [Arabidopsis thaliana]
gi|20856609|gb|AAM26675.1| At1g18620/F25I16_13
[Arabidopsis thaliana]
Length = 978
Score = 84.7 bits (208), Expect = 6e-16
Identities = 59/105 (56%), Positives = 70/105 (66%), Gaps = 6/105 (5%)
Frame = -3
Query: 533 KKSLSAQKLLKELCFEIE--KVQAKKPGWCL----ELEGEEDDGLKSILWEDVMHEGSES 372
KK LSAQ LLKELC EIE + QAKK L E E EE+D LK IL ED+ + SE
Sbjct: 871 KKVLSAQNLLKELCSEIEILQKQAKKRSENLLLLEEEEEEEEDFLKCILDEDMAIQ-SEK 929
Query: 371 WKNFNGEIPGFVLDVERLIFKDLVGEIVIGEAASMRLKPSVRRRK 237
W +F+ IPG VLD+ERL+FKDLV EIV GE RL+ + RR+K
Sbjct: 930 WTDFDDAIPGLVLDMERLLFKDLVKEIVHGEID--RLQGNSRRQK 972
>ref|NP_197062.1| putative protein; protein id: At5g15580.1 [Arabidopsis thaliana]
gi|11358126|pir||T51536 hypothetical protein T20K14_190 -
Arabidopsis thaliana gi|9755813|emb|CAC01757.1| putative
protein [Arabidopsis thaliana]
Length = 927
Score = 77.8 bits (190), Expect = 8e-14
Identities = 44/104 (42%), Positives = 63/104 (60%)
Frame = -3
Query: 542 RLTKKSLSAQKLLKELCFEIEKVQAKKPGWCLELEGEEDDGLKSILWEDVMHEGSESWKN 363
R +KS ++LL+ LC EI+++Q C+ E +ED ++WED+ G +WK
Sbjct: 830 RTHEKSSRGEELLQTLCSEIDRLQDNSK--CILDEDDED-----LIWEDLQSHGM-NWKE 881
Query: 362 FNGEIPGFVLDVERLIFKDLVGEIVIGEAASMRLKPSVRRRKLF 231
GE PG VLD+ERLIFKDL+GE+V E A+ S + R+LF
Sbjct: 882 IEGETPGLVLDIERLIFKDLIGEVVTSEFAAFPRMLSGQPRQLF 925
>gb|AAM64269.1| unknown [Arabidopsis thaliana]
Length = 442
Score = 62.8 bits (151), Expect = 3e-09
Identities = 35/81 (43%), Positives = 51/81 (62%)
Frame = -3
Query: 533 KKSLSAQKLLKELCFEIEKVQAKKPGWCLELEGEEDDGLKSILWEDVMHEGSESWKNFNG 354
+K ++LL+ LC EI+++Q LE + EED I+WED+ + S + K F G
Sbjct: 366 EKISKEEQLLQTLCSEIDRLQQNNSNCILE-DDEED-----IIWEDLQSQ-SMNLKEFEG 418
Query: 353 EIPGFVLDVERLIFKDLVGEI 291
E PG VLD+ER+IF+DLV E+
Sbjct: 419 ETPGIVLDIERMIFRDLVNEV 439
>ref|NP_566165.2| expressed protein; protein id: At3g02170.1, supported by cDNA:
gi_15810132 [Arabidopsis thaliana]
gi|6041800|gb|AAF02120.1|AC009755_13 unknown protein
[Arabidopsis thaliana]
gi|6513917|gb|AAF14821.1|AC011664_3 unknown protein
[Arabidopsis thaliana] gi|23297751|gb|AAN13017.1| unknown
protein [Arabidopsis thaliana]
Length = 905
Score = 62.8 bits (151), Expect = 3e-09
Identities = 35/81 (43%), Positives = 51/81 (62%)
Frame = -3
Query: 533 KKSLSAQKLLKELCFEIEKVQAKKPGWCLELEGEEDDGLKSILWEDVMHEGSESWKNFNG 354
+K ++LL+ LC EI+++Q LE + EED I+WED+ + S + K F G
Sbjct: 829 EKISKEEQLLQTLCSEIDRLQQNNSNCILE-DDEED-----IIWEDLQSQ-SMNLKEFEG 881
Query: 353 EIPGFVLDVERLIFKDLVGEI 291
E PG VLD+ER+IF+DLV E+
Sbjct: 882 ETPGIVLDIERMIFRDLVNEV 902
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 444,971,003
Number of Sequences: 1393205
Number of extensions: 9668699
Number of successful extensions: 46236
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 32650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44063
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18750593680
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
