Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014742A_C01 KMC014742A_c01
(474 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK53020.1|AF375436_1 AT3g57880/T10K17_90 [Arabidopsis thalia... 134 4e-31
ref|NP_191347.1| anthranilate phosphoribosyltransferase-like pro... 134 4e-31
dbj|BAB91449.1| phosphoribosyltransferase [Sequoia sempervirens] 132 2e-30
ref|NP_196801.1| anthranilate phosphoribosyltransferase -like pr... 131 4e-30
gb|AAK74053.1| F19C24.20/F19C24.20 [Arabidopsis thaliana] gi|158... 131 4e-30
>gb|AAK53020.1|AF375436_1 AT3g57880/T10K17_90 [Arabidopsis thaliana]
gi|21464555|gb|AAM52232.1| AT3g57880/T10K17_90
[Arabidopsis thaliana]
Length = 773
Score = 134 bits (338), Expect = 4e-31
Identities = 62/70 (88%), Positives = 67/70 (95%)
Frame = -3
Query: 472 SLLSWRDPRATALFVIFCLVAAIVLYVTPFQVVALLTGIYVLRHPRFRHKLPSVPLNFFR 293
SLLSWRDPRATALFV+FCL+AA++LYVTPFQVVAL GIY LRHPRFR+KLPSVPLNFFR
Sbjct: 704 SLLSWRDPRATALFVLFCLIAAVILYVTPFQVVALCIGIYALRHPRFRYKLPSVPLNFFR 763
Query: 292 RLPARTDCML 263
RLPARTDCML
Sbjct: 764 RLPARTDCML 773
>ref|NP_191347.1| anthranilate phosphoribosyltransferase-like protein; protein id:
At3g57880.1, supported by cDNA: gi_14030690 [Arabidopsis
thaliana] gi|11281893|pir||T46010 anthranilate
phosphoribosyltransferase-like protein - Arabidopsis
thaliana gi|6729531|emb|CAB67616.1| anthranilate
phosphoribosyltransferase-like protein [Arabidopsis
thaliana]
Length = 773
Score = 134 bits (338), Expect = 4e-31
Identities = 62/70 (88%), Positives = 67/70 (95%)
Frame = -3
Query: 472 SLLSWRDPRATALFVIFCLVAAIVLYVTPFQVVALLTGIYVLRHPRFRHKLPSVPLNFFR 293
SLLSWRDPRATALFV+FCL+AA++LYVTPFQVVAL GIY LRHPRFR+KLPSVPLNFFR
Sbjct: 704 SLLSWRDPRATALFVLFCLIAAVILYVTPFQVVALCIGIYALRHPRFRYKLPSVPLNFFR 763
Query: 292 RLPARTDCML 263
RLPARTDCML
Sbjct: 764 RLPARTDCML 773
>dbj|BAB91449.1| phosphoribosyltransferase [Sequoia sempervirens]
Length = 191
Score = 132 bits (331), Expect = 2e-30
Identities = 61/70 (87%), Positives = 68/70 (97%)
Frame = -3
Query: 472 SLLSWRDPRATALFVIFCLVAAIVLYVTPFQVVALLTGIYVLRHPRFRHKLPSVPLNFFR 293
+LLSWRDPRATA+FV+FCL+AAIVLYVTPFQV+A+L GIYVLRHPRFRHKLPSVPLNFFR
Sbjct: 122 ALLSWRDPRATAIFVLFCLIAAIVLYVTPFQVIAVLFGIYVLRHPRFRHKLPSVPLNFFR 181
Query: 292 RLPARTDCML 263
RLPAR+D ML
Sbjct: 182 RLPARSDSML 191
>ref|NP_196801.1| anthranilate phosphoribosyltransferase -like protein; protein id:
At5g12970.1 [Arabidopsis thaliana]
gi|11281892|pir||T49911 anthranilate
phosphoribosyltransferase-like protein - Arabidopsis
thaliana gi|7630053|emb|CAB88261.1| anthranilate
phosphoribosyltransferase-like protein [Arabidopsis
thaliana]
Length = 769
Score = 131 bits (329), Expect = 4e-30
Identities = 62/70 (88%), Positives = 66/70 (93%)
Frame = -3
Query: 472 SLLSWRDPRATALFVIFCLVAAIVLYVTPFQVVALLTGIYVLRHPRFRHKLPSVPLNFFR 293
SLLSWRDPRAT LFV+FCL+AAIVLYVTPFQVVALL GIYVLRHPRFRHKLPSVPLN FR
Sbjct: 700 SLLSWRDPRATTLFVLFCLIAAIVLYVTPFQVVALLAGIYVLRHPRFRHKLPSVPLNLFR 759
Query: 292 RLPARTDCML 263
RLPAR+D +L
Sbjct: 760 RLPARSDSLL 769
>gb|AAK74053.1| F19C24.20/F19C24.20 [Arabidopsis thaliana]
gi|15809776|gb|AAL06816.1| At1g51570/F19C24.20
[Arabidopsis thaliana]
Length = 290
Score = 131 bits (329), Expect = 4e-30
Identities = 59/70 (84%), Positives = 66/70 (94%)
Frame = -3
Query: 472 SLLSWRDPRATALFVIFCLVAAIVLYVTPFQVVALLTGIYVLRHPRFRHKLPSVPLNFFR 293
SLLSWRDPRATALFV+FCL+AA++LY+TPFQVVA G+YVLRHPR R+KLPSVPLNFFR
Sbjct: 221 SLLSWRDPRATALFVLFCLIAAVILYITPFQVVAFAIGLYVLRHPRLRYKLPSVPLNFFR 280
Query: 292 RLPARTDCML 263
RLPARTDCML
Sbjct: 281 RLPARTDCML 290
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 391,193,047
Number of Sequences: 1393205
Number of extensions: 7826611
Number of successful extensions: 25497
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 24334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25463
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 12815311608
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
