Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014719A_C01 KMC014719A_c01
(572 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T02172 hypothetical protein F14M4.1 - Arabidopsis thaliana 109 2e-23
ref|NP_182238.2| putative anion exchange protein; protein id: At... 109 2e-23
ref|NP_191786.1| putative protein; protein id: At3g62270.1, supp... 100 2e-20
gb|AAF08571.1|AC011623_4 unknown protein [Arabidopsis thaliana] 95 7e-19
ref|NP_187296.2| unknown protein; protein id: At3g06450.1, suppo... 95 7e-19
>pir||T02172 hypothetical protein F14M4.1 - Arabidopsis thaliana
Length = 344
Score = 109 bits (273), Expect = 2e-23
Identities = 59/107 (55%), Positives = 76/107 (70%), Gaps = 3/107 (2%)
Frame = -1
Query: 572 IMLLVPVRQYFLPKFFKGAHLQELDAAAYEEAPAIAFNMSFEDPSSHGTTVNISGG-EIL 396
IM L+PVRQY LP+FFKGAHLQ+LDAA YEEAPA+ FN++ E + G+T + G EIL
Sbjct: 214 IMFLIPVRQYLLPRFFKGAHLQDLDAAEYEEAPALPFNLAAE--TEIGSTTSYPGDLEIL 271
Query: 395 DEIITRSRGEIRRTQSPK--TSSSTPISTGDIRPANSPLSNGTERGK 261
DE++TRSRGE R T SPK +SSSTP++ + SP +G G+
Sbjct: 272 DEVMTRSRGEFRHTSSPKVTSSSSTPVNNRSLSQVFSPRVSGIRLGQ 318
>ref|NP_182238.2| putative anion exchange protein; protein id: At2g47160.1, supported
by cDNA: gi_17979132, supported by cDNA: gi_20465344
[Arabidopsis thaliana] gi|17979133|gb|AAL49824.1|
putative anion exchange protein [Arabidopsis thaliana]
gi|20465345|gb|AAM20076.1| putative anion exchange
protein [Arabidopsis thaliana]
gi|23397182|gb|AAN31874.1| putative anion exchange
protein [Arabidopsis thaliana]
gi|23495359|dbj|BAC20173.1| BOR1 [Arabidopsis thaliana]
Length = 704
Score = 109 bits (273), Expect = 2e-23
Identities = 59/107 (55%), Positives = 76/107 (70%), Gaps = 3/107 (2%)
Frame = -1
Query: 572 IMLLVPVRQYFLPKFFKGAHLQELDAAAYEEAPAIAFNMSFEDPSSHGTTVNISGG-EIL 396
IM L+PVRQY LP+FFKGAHLQ+LDAA YEEAPA+ FN++ E + G+T + G EIL
Sbjct: 574 IMFLIPVRQYLLPRFFKGAHLQDLDAAEYEEAPALPFNLAAE--TEIGSTTSYPGDLEIL 631
Query: 395 DEIITRSRGEIRRTQSPK--TSSSTPISTGDIRPANSPLSNGTERGK 261
DE++TRSRGE R T SPK +SSSTP++ + SP +G G+
Sbjct: 632 DEVMTRSRGEFRHTSSPKVTSSSSTPVNNRSLSQVFSPRVSGIRLGQ 678
>ref|NP_191786.1| putative protein; protein id: At3g62270.1, supported by cDNA:
gi_18377738, supported by cDNA: gi_20465400 [Arabidopsis
thaliana] gi|11358070|pir||T48019 hypothetical protein
T17J13.230 - Arabidopsis thaliana
gi|6899937|emb|CAB71887.1| putative protein [Arabidopsis
thaliana] gi|18377739|gb|AAL67019.1| unknown protein
[Arabidopsis thaliana] gi|20465401|gb|AAM20125.1|
unknown protein [Arabidopsis thaliana]
Length = 703
Score = 99.8 bits (247), Expect = 2e-20
Identities = 52/97 (53%), Positives = 65/97 (66%), Gaps = 2/97 (2%)
Frame = -1
Query: 572 IMLLVPVRQYFLPKFFKGAHLQELDAAAYEEAPAIAFNMSFEDPSSHGTTVNISGGEILD 393
IM L+PVRQY LP+FFK AHLQ+LDAA YEEAPA+ F+++ + T EILD
Sbjct: 574 IMFLIPVRQYILPRFFKSAHLQDLDAAEYEEAPALPFHLAVPEAEMGSTASYPCDSEILD 633
Query: 392 EIITRSRGEIRRTQSPK--TSSSTPISTGDIRPANSP 288
E ITRSRGE R T SPK +S+STP+ ++ SP
Sbjct: 634 EFITRSRGEFRHTCSPKVTSSTSTPVYNRNLSQVFSP 670
>gb|AAF08571.1|AC011623_4 unknown protein [Arabidopsis thaliana]
Length = 736
Score = 94.7 bits (234), Expect = 7e-19
Identities = 59/119 (49%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Frame = -1
Query: 572 IMLLVPVRQYFLPKFFKGAHLQELDAAAYEEAPAI-AFNMSFEDPSSHGTTVNISGGEIL 396
IM LVPVRQY LP FFKGAHLQ+LDAA YEEAPAI +FN+ E S T+ GE++
Sbjct: 577 IMFLVPVRQYVLPNFFKGAHLQDLDAAEYEEAPAILSFNLKPEGEVSRATSF-ADSGEVM 635
Query: 395 DEIITRSRGEIRRTQSPKTSSSTPISTGDIRPANSPLSNGTERGKRPTSNFEGDKVNTK 219
D + TRSRGEIR+ S K ST SP G E +R S F+ +V+ K
Sbjct: 636 DGMFTRSRGEIRKVSSLKLGGGGSGST-----VGSPAGGGVELMRRVVS-FQNPRVSEK 688
>ref|NP_187296.2| unknown protein; protein id: At3g06450.1, supported by cDNA:
gi_16604463 [Arabidopsis thaliana]
gi|16604464|gb|AAL24238.1| AT3g06450/F24P17_6
[Arabidopsis thaliana] gi|23308463|gb|AAN18201.1|
At3g06450/F24P17_6 [Arabidopsis thaliana]
Length = 732
Score = 94.7 bits (234), Expect = 7e-19
Identities = 59/119 (49%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Frame = -1
Query: 572 IMLLVPVRQYFLPKFFKGAHLQELDAAAYEEAPAI-AFNMSFEDPSSHGTTVNISGGEIL 396
IM LVPVRQY LP FFKGAHLQ+LDAA YEEAPAI +FN+ E S T+ GE++
Sbjct: 573 IMFLVPVRQYVLPNFFKGAHLQDLDAAEYEEAPAILSFNLKPEGEVSRATSF-ADSGEVM 631
Query: 395 DEIITRSRGEIRRTQSPKTSSSTPISTGDIRPANSPLSNGTERGKRPTSNFEGDKVNTK 219
D + TRSRGEIR+ S K ST SP G E +R S F+ +V+ K
Sbjct: 632 DGMFTRSRGEIRKVSSLKLGGGGSGST-----VGSPAGGGVELMRRVVS-FQNPRVSEK 684
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 462,567,300
Number of Sequences: 1393205
Number of extensions: 9444013
Number of successful extensions: 25179
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 24198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25086
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21243732558
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
