Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014699A_C01 KMC014699A_c01
(438 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_197676.1| protease-like protein; protein id: At5g22850.1 ... 133 4e-31
dbj|BAC07361.1| P0413G02.18 [Oryza sativa (japonica cultivar-gro... 105 2e-22
ref|NP_563808.1| expressed protein; protein id: At1g08210.1, sup... 100 3e-21
ref|NP_181205.1| putative protease; protein id: At2g36670.1 [Ara... 83 9e-16
gb|AAF18253.1|AC011438_15 T23G18.7 [Arabidopsis thaliana] 80 6e-15
>ref|NP_197676.1| protease-like protein; protein id: At5g22850.1 [Arabidopsis
thaliana] gi|10177232|dbj|BAB10606.1| protease-like
protein [Arabidopsis thaliana]
Length = 539
Score = 133 bits (335), Expect = 4e-31
Identities = 61/82 (74%), Positives = 72/82 (87%)
Frame = -1
Query: 435 PSDYLIQKSYIGDGSVWCIGFQKIPGQSVTILGDLVLKDKIFVYDLVDQRIGWANYDCSL 256
P DYLIQ++ +G +VWCIGFQ+I Q +TILGDLVLKDKIFVYDLV QRIGWANYDCS
Sbjct: 383 PQDYLIQQNNVGGTAVWCIGFQRIQNQGITILGDLVLKDKIFVYDLVGQRIGWANYDCST 442
Query: 255 SVNVSASTGTGRSEFVNAGEFS 190
SVNVSA++ +GRSE+VNAG+FS
Sbjct: 443 SVNVSATSSSGRSEYVNAGQFS 464
>dbj|BAC07361.1| P0413G02.18 [Oryza sativa (japonica cultivar-group)]
Length = 574
Score = 105 bits (261), Expect = 2e-22
Identities = 46/81 (56%), Positives = 65/81 (79%)
Frame = -1
Query: 435 PSDYLIQKSYIGDGSVWCIGFQKIPGQSVTILGDLVLKDKIFVYDLVDQRIGWANYDCSL 256
P +YL+Q++ I + +WCIG+Q+ GQ +TILGDLVLKDKIFVYDL + R+GW +YDCS
Sbjct: 394 PENYLLQQASIDNNVLWCIGWQRNQGQQITILGDLVLKDKIFVYDLANMRMGWTDYDCST 453
Query: 255 SVNVSASTGTGRSEFVNAGEF 193
SVNV +T +G++++VN G+F
Sbjct: 454 SVNV--TTSSGKNQYVNTGQF 472
>ref|NP_563808.1| expressed protein; protein id: At1g08210.1, supported by cDNA:
gi_11993876, supported by cDNA: gi_20260141 [Arabidopsis
thaliana] gi|11993877|gb|AAG42922.1|AF329505_1 unknown
protein [Arabidopsis thaliana]
gi|20260142|gb|AAM12969.1| unknown protein [Arabidopsis
thaliana] gi|22136092|gb|AAM91124.1| unknown protein
[Arabidopsis thaliana]
Length = 492
Score = 100 bits (250), Expect = 3e-21
Identities = 53/91 (58%), Positives = 64/91 (70%), Gaps = 2/91 (2%)
Frame = -1
Query: 438 GPSDYLIQKSYIGDGSVWCIGFQKIPGQSVTILGDLVLKDKIFVYDLVDQRIGWANYDCS 259
GP YL S G S+WCIGFQ++ + +TILGDLVLKDK+ VYDLV QRIGWA YDCS
Sbjct: 383 GPRAYLQIFSSSGS-SIWCIGFQRMSHRRITILGDLVLKDKVVVYDLVRQRIGWAEYDCS 441
Query: 258 LSVNVSASTGTGRSEFVNAGEF--SGSTSLH 172
L VNVSAS G + +N G++ SGS S +
Sbjct: 442 LEVNVSASRGGRSKDVINTGQWRESGSESFN 472
>ref|NP_181205.1| putative protease; protein id: At2g36670.1 [Arabidopsis thaliana]
gi|25408496|pir||C84783 probable proteinase [imported] -
Arabidopsis thaliana gi|4415912|gb|AAD20143.1| putative
protease [Arabidopsis thaliana]
Length = 469
Score = 82.8 bits (203), Expect = 9e-16
Identities = 39/64 (60%), Positives = 44/64 (67%)
Frame = -1
Query: 435 PSDYLIQKSYIGDGSVWCIGFQKIPGQSVTILGDLVLKDKIFVYDLVDQRIGWANYDCSL 256
P DYL S+WCIGFQK P + TILGDLVLKDK+FVYDL QRIGWA+YDC
Sbjct: 401 PQDYLFHYGIYDGASMWCIGFQKAPEEQ-TILGDLVLKDKVFVYDLARQRIGWASYDCKC 459
Query: 255 SVNV 244
+ V
Sbjct: 460 NHRV 463
>gb|AAF18253.1|AC011438_15 T23G18.7 [Arabidopsis thaliana]
Length = 566
Score = 80.1 bits (196), Expect = 6e-15
Identities = 39/62 (62%), Positives = 45/62 (71%)
Frame = -1
Query: 438 GPSDYLIQKSYIGDGSVWCIGFQKIPGQSVTILGDLVLKDKIFVYDLVDQRIGWANYDCS 259
GP YL S G S+WCIGFQ++ + +TILGDLVLKDK+ VYDLV QRIGWA YDC
Sbjct: 477 GPRAYLQIFSSSGS-SIWCIGFQRMSHRRITILGDLVLKDKVVVYDLVRQRIGWAEYDCE 535
Query: 258 LS 253
S
Sbjct: 536 FS 537
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 355,331,151
Number of Sequences: 1393205
Number of extensions: 7042389
Number of successful extensions: 16812
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 16441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16808
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 6722674608
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
