Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014561A_C01 KMC014561A_c01
(1028 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_181477.1| unknown protein; protein id: At2g39450.1 [Arabi... 517 e-145
dbj|BAB67872.1| P0031D11.4 [Oryza sativa (japonica cultivar-group)] 399 e-110
gb|AAO38708.1| cation diffusion facilitator 2 [Stylosanthes hamata] 355 5e-97
gb|AAO38709.1| cation diffusion facilitator 3 [Stylosanthes hamata] 355 5e-97
ref|NP_178070.1| unknown protein; protein id: At1g79520.1 [Arabi... 355 8e-97
>ref|NP_181477.1| unknown protein; protein id: At2g39450.1 [Arabidopsis thaliana]
gi|7485406|pir||T00555 hypothetical protein At2g39450
[imported] - Arabidopsis thaliana
gi|3355474|gb|AAC27836.1| unknown protein [Arabidopsis
thaliana] gi|22531221|gb|AAM97114.1| unknown protein
[Arabidopsis thaliana]
Length = 394
Score = 517 bits (1331), Expect = e-145
Identities = 260/322 (80%), Positives = 285/322 (87%)
Frame = +3
Query: 63 MVEPVELGSEEQRSLLSDANSGDLSWRLNFEAFQLSSEHAEKKVKPRRGLHDCYGVLGEE 242
MVEP S+E SLL +GD SW+LNF+ FQ+S EH EKK + LH+C G LG E
Sbjct: 1 MVEPASPDSDEGISLLEFHGNGDRSWQLNFDDFQVSPEHKEKKSPSK--LHNCLGCLGPE 58
Query: 243 DNIAEYYQQQVEVLEGFNEMDALAERGFIPGMSKEERDKLARSETFAIRISNIANMVLFV 422
DN+A+YYQQQVE+LEGF EMD LAERGF+PGMSKEE+D LA+SET AIRISNIANM+LF
Sbjct: 59 DNVADYYQQQVEMLEGFTEMDELAERGFVPGMSKEEQDNLAKSETLAIRISNIANMLLFA 118
Query: 423 AKVYASLRSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILV 602
AKVYAS+ SGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILV
Sbjct: 119 AKVYASVTSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILV 178
Query: 603 FASVMATLGLQIILESIRTLLSSDTAFSLTREQEHWVVGIMLSVTLVKFLLMIYCRSFTN 782
FASVMATLGLQIILES+RT+LSS F+LT+EQE WVVGIMLSVTLVK LL++YCRSFTN
Sbjct: 179 FASVMATLGLQIILESLRTMLSSHKEFNLTKEQESWVVGIMLSVTLVKLLLVLYCRSFTN 238
Query: 783 EIVKAYAQDHFFDVITNVIGLIAALLANYFDDWMDPVGAIILALYTIRTWSLTVLENVNS 962
EIVKAYAQDHFFDVITN+IGLIA +LANY D W+DPVGAIILALYTIRTWS+TVLENVNS
Sbjct: 239 EIVKAYAQDHFFDVITNIIGLIAVILANYIDYWIDPVGAIILALYTIRTWSMTVLENVNS 298
Query: 963 LVGKSAAPEYLQKLTYLCWNHH 1028
LVGKSA PEYLQKLTYLCWNHH
Sbjct: 299 LVGKSARPEYLQKLTYLCWNHH 320
>dbj|BAB67872.1| P0031D11.4 [Oryza sativa (japonica cultivar-group)]
Length = 311
Score = 399 bits (1024), Expect = e-110
Identities = 204/266 (76%), Positives = 232/266 (86%), Gaps = 3/266 (1%)
Frame = +3
Query: 123 SGDLSWRLNFEAFQLSSEHAEKKVKPRRGLHD-CYGVL--GEEDNIAEYYQQQVEVLEGF 293
+ + SWRLNF+ F+ E++ P RGLH C GVL G ED +AEYYQQQVE+LEGF
Sbjct: 38 AAEKSWRLNFDGFRPPEVQQERR--PPRGLHHHCLGVLSQGPEDVVAEYYQQQVEMLEGF 95
Query: 294 NEMDALAERGFIPGMSKEERDKLARSETFAIRISNIANMVLFVAKVYASLRSGSLAIIAS 473
NEMD L +RGF+PGMSKEER+K+ARSET AIR+SNIANMVLF AKVYAS+RSGSLAIIAS
Sbjct: 96 NEMDTLTDRGFLPGMSKEEREKVARSETLAIRLSNIANMVLFAAKVYASVRSGSLAIIAS 155
Query: 474 TLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILESI 653
TLDSLLDLLSGFILWFTAFSMQTPNPY+YPIGKKRMQPLGILVFASVMATLGLQIILES+
Sbjct: 156 TLDSLLDLLSGFILWFTAFSMQTPNPYRYPIGKKRMQPLGILVFASVMATLGLQIILESV 215
Query: 654 RTLLSSDTAFSLTREQEHWVVGIMLSVTLVKFLLMIYCRSFTNEIVKAYAQDHFFDVITN 833
R+LLS FSLT+EQE WVV IML+VTLVK L++YCR+FTNEIVKAYAQDHFFDVITN
Sbjct: 216 RSLLSDGDEFSLTKEQEKWVVDIMLAVTLVKLALVLYCRTFTNEIVKAYAQDHFFDVITN 275
Query: 834 VIGLIAALLANYFDDWMDPVGAIILA 911
+IGL+AALLA Y + W+DPVGAII++
Sbjct: 276 MIGLVAALLATYIEGWIDPVGAIIVS 301
>gb|AAO38708.1| cation diffusion facilitator 2 [Stylosanthes hamata]
Length = 406
Score = 355 bits (912), Expect = 5e-97
Identities = 181/312 (58%), Positives = 235/312 (75%), Gaps = 1/312 (0%)
Frame = +3
Query: 96 QRSLLSDANSGDLSWRLNFEAFQLSSEHAEKKVKPRRGLHDCYGVLGEEDNIAEYYQQQV 275
+R L S + G SWRLN + F L + H + R L ++ +AEYY++Q
Sbjct: 24 ERLLDSQEDEGSASWRLNVKEFTLKNNHENNNNRAHRTLTFLRRPK-KQRKVAEYYKKQE 82
Query: 276 EVLEGFNEMDALAERGFIPG-MSKEERDKLARSETFAIRISNIANMVLFVAKVYASLRSG 452
++LEGFNEMD +AE GF PG ++++E +LA+ E A+ +SN N+VLF AKV+AS S
Sbjct: 83 KLLEGFNEMDTMAETGFFPGSLTEDELKQLAKGERMAVNMSNACNLVLFGAKVFASAESR 142
Query: 453 SLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGL 632
SLA+IAST+DSLLDLLSGFILWFTA +M+TPN + YPIGKKRMQP+GI+VFASVMATLGL
Sbjct: 143 SLAVIASTMDSLLDLLSGFILWFTAHAMKTPNQFHYPIGKKRMQPVGIIVFASVMATLGL 202
Query: 633 QIILESIRTLLSSDTAFSLTREQEHWVVGIMLSVTLVKFLLMIYCRSFTNEIVKAYAQDH 812
QI++ES R L++ T + ++ +W++GIM SVT+VKF+LM+YCR F NEIV+AYAQDH
Sbjct: 203 QILIESGRELINK-TKPEMDHKKLNWMIGIMASVTVVKFILMVYCRRFKNEIVRAYAQDH 261
Query: 813 FFDVITNVIGLIAALLANYFDDWMDPVGAIILALYTIRTWSLTVLENVNSLVGKSAAPEY 992
FFDVITN +GL AA+LA F W+DP GAII+ALYTI TW+ TV ENV SL+G++A P++
Sbjct: 262 FFDVITNSVGLAAAVLAVKFYWWLDPTGAIIIALYTINTWTRTVFENVWSLIGRTAPPDF 321
Query: 993 LQKLTYLCWNHH 1028
L KLTYL WNHH
Sbjct: 322 LAKLTYLIWNHH 333
>gb|AAO38709.1| cation diffusion facilitator 3 [Stylosanthes hamata]
Length = 413
Score = 355 bits (912), Expect = 5e-97
Identities = 183/320 (57%), Positives = 235/320 (73%), Gaps = 5/320 (1%)
Frame = +3
Query: 84 GSEEQRSLLSDANSGDLSWRLNFEAFQLSSEHAEKKVKPRRG-LHDCYGVLG---EEDNI 251
G +R L S + G+ SWRLN + F L + H + H L ++ +
Sbjct: 22 GGRTERLLDSQEDEGNASWRLNVKEFTLKNNHENNRNGGNSNRAHRTLTFLRRPKKQRKV 81
Query: 252 AEYYQQQVEVLEGFNEMDALAERGFIPG-MSKEERDKLARSETFAIRISNIANMVLFVAK 428
AEYY++Q +LEGFNEMD +AE GF PG ++++E +LA+ E A+ +SN N+VLF AK
Sbjct: 82 AEYYKKQERLLEGFNEMDTMAETGFFPGSLTEDEMKQLAKGERMAVTVSNACNLVLFGAK 141
Query: 429 VYASLRSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFA 608
V+AS S SLA+IAST+DSLLDLLSGFILWFTA +M+TPN + YPIGKKRMQP+GI+VFA
Sbjct: 142 VFASFESRSLAVIASTMDSLLDLLSGFILWFTAHAMKTPNRFHYPIGKKRMQPVGIIVFA 201
Query: 609 SVMATLGLQIILESIRTLLSSDTAFSLTREQEHWVVGIMLSVTLVKFLLMIYCRSFTNEI 788
SVMATLGLQI++ES R L++ T ++ +W++GIM SVT+VKF+LMIYCR F NEI
Sbjct: 202 SVMATLGLQILIESARELINK-TKPETDPKKLNWMIGIMASVTVVKFILMIYCRRFKNEI 260
Query: 789 VKAYAQDHFFDVITNVIGLIAALLANYFDDWMDPVGAIILALYTIRTWSLTVLENVNSLV 968
V+AYAQDHFFDVITN +GL AA+LA F W+DP GAII+ALYTI TW+ TV ENV SL+
Sbjct: 261 VRAYAQDHFFDVITNSVGLAAAVLAVKFYWWLDPTGAIIIALYTINTWTRTVYENVRSLI 320
Query: 969 GKSAAPEYLQKLTYLCWNHH 1028
G++A P++L KLTYL WNHH
Sbjct: 321 GRTAPPDFLAKLTYLIWNHH 340
>ref|NP_178070.1| unknown protein; protein id: At1g79520.1 [Arabidopsis thaliana]
gi|25406590|pir||E96826 hypothetical protein T8K14.6
[imported] - Arabidopsis thaliana
gi|4835757|gb|AAD30224.1|AC007202_6 EST gb|AA404917 comes
from this gene. [Arabidopsis thaliana]
Length = 434
Score = 355 bits (910), Expect = 8e-97
Identities = 182/301 (60%), Positives = 235/301 (77%), Gaps = 3/301 (0%)
Frame = +3
Query: 135 SWRLNFEAFQL--SSEHAEKKVKPRRGLHDCYGVLGEEDNIAEYYQQQVEVLEGFNEMDA 308
SWRL+ + F+L SS + + R L +E ++EYY+QQ ++LEGFNEM+
Sbjct: 30 SWRLSLDTFRLPSSSPLSSGRHNGRTRLSRYLRTPKKERKVSEYYKQQEKLLEGFNEMET 89
Query: 309 LAERGFIPGM-SKEERDKLARSETFAIRISNIANMVLFVAKVYASLRSGSLAIIASTLDS 485
+ E GF+ G ++EE KLA+SE A+ ISN AN+VLFVAKVYAS+ S S+A+IASTLDS
Sbjct: 90 INETGFVSGAPTEEELKKLAKSERLAVHISNAANLVLFVAKVYASVESRSMAVIASTLDS 149
Query: 486 LLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILESIRTLL 665
LLDLLSGFILWFTA +M+TPN ++YPIGK+RMQP+GI+VFASVMATLGLQ+ILES R L+
Sbjct: 150 LLDLLSGFILWFTANAMRTPNNFRYPIGKRRMQPVGIIVFASVMATLGLQVILESTRLLV 209
Query: 666 SSDTAFSLTREQEHWVVGIMLSVTLVKFLLMIYCRSFTNEIVKAYAQDHFFDVITNVIGL 845
S + + ++ +E W++GIM S T+VKFLLM+YCRSF NEIV+AYAQDH FDVITN +GL
Sbjct: 210 SKNGSH-MSSTEEKWMIGIMASATVVKFLLMLYCRSFQNEIVRAYAQDHLFDVITNSVGL 268
Query: 846 IAALLANYFDDWMDPVGAIILALYTIRTWSLTVLENVNSLVGKSAAPEYLQKLTYLCWNH 1025
A+LA F W+DP GAI++ALYTI TW+ TVLENV+SL+G+SA P++L KLT+L WNH
Sbjct: 269 ATAVLAVKFYWWIDPSGAILIALYTISTWARTVLENVHSLIGRSAPPDFLAKLTFLIWNH 328
Query: 1026 H 1028
H
Sbjct: 329 H 329
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 882,641,186
Number of Sequences: 1393205
Number of extensions: 19441081
Number of successful extensions: 60304
Number of sequences better than 10.0: 144
Number of HSP's better than 10.0 without gapping: 57167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60202
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 60153138286
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
