Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014550A_C01 KMC014550A_c01
(511 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||F86441 probable cytochrome P450 [imported] - Arabidopsis th... 124 6e-28
ref|NP_564384.1| cytochrome P450, putative; protein id: At1g3180... 124 6e-28
ref|NP_190881.1| cytochrome p450 family; protein id: At3g53130.1... 75 4e-13
gb|AAM13903.1| putative cytochrome P450 [Arabidopsis thaliana] 75 4e-13
gb|AAL73435.1|AF459441_1 cytochrome P450 [Skeletonema costatum] 74 1e-12
>pir||F86441 probable cytochrome P450 [imported] - Arabidopsis thaliana
gi|12321297|gb|AAG50718.1|AC079041_11 cytochrome P450,
putative [Arabidopsis thaliana]
Length = 593
Score = 124 bits (311), Expect = 6e-28
Identities = 61/83 (73%), Positives = 69/83 (82%), Gaps = 3/83 (3%)
Frame = -3
Query: 509 NFRYLPFGGGQRKCIGDMFATFETVVALAMLVRRFNFQMAIGAPPVVMTTGATIHTTQGL 330
NF YLPFGGG RKCIGDMFA+FE VVA+AML+RRFNFQ+A GAPPV MTTGATIHTT+GL
Sbjct: 501 NFSYLPFGGGPRKCIGDMFASFENVVAIAMLIRRFNFQIAPGAPPVKMTTGATIHTTEGL 560
Query: 329 NMTVTRRIQP---PIVPSLHMST 270
+TVT+R +P P VP L M T
Sbjct: 561 KLTVTKRTKPLDIPSVPILPMDT 583
>ref|NP_564384.1| cytochrome P450, putative; protein id: At1g31800.1, supported by
cDNA: gi_15912336, supported by cDNA: gi_16648792
[Arabidopsis thaliana] gi|15912337|gb|AAL08302.1|
At1g31800/68069_m00159 [Arabidopsis thaliana]
gi|16648793|gb|AAL25587.1| At1g31800/68069_m00159
[Arabidopsis thaliana] gi|22655378|gb|AAM98281.1|
At1g31800/68069_m00159 [Arabidopsis thaliana]
Length = 595
Score = 124 bits (311), Expect = 6e-28
Identities = 61/83 (73%), Positives = 69/83 (82%), Gaps = 3/83 (3%)
Frame = -3
Query: 509 NFRYLPFGGGQRKCIGDMFATFETVVALAMLVRRFNFQMAIGAPPVVMTTGATIHTTQGL 330
NF YLPFGGG RKCIGDMFA+FE VVA+AML+RRFNFQ+A GAPPV MTTGATIHTT+GL
Sbjct: 503 NFSYLPFGGGPRKCIGDMFASFENVVAIAMLIRRFNFQIAPGAPPVKMTTGATIHTTEGL 562
Query: 329 NMTVTRRIQP---PIVPSLHMST 270
+TVT+R +P P VP L M T
Sbjct: 563 KLTVTKRTKPLDIPSVPILPMDT 585
>ref|NP_190881.1| cytochrome p450 family; protein id: At3g53130.1 [Arabidopsis
thaliana] gi|11249712|pir||T46159 cytochrome P450-like
protein - Arabidopsis thaliana
gi|6630733|emb|CAB64216.1| Cytochrom P450-like protein
[Arabidopsis thaliana]
Length = 566
Score = 75.1 bits (183), Expect = 4e-13
Identities = 34/67 (50%), Positives = 49/67 (72%)
Frame = -3
Query: 509 NFRYLPFGGGQRKCIGDMFATFETVVALAMLVRRFNFQMAIGAPPVVMTTGATIHTTQGL 330
+F+++PF GG RKC+GD FA E +VALA+ ++R N ++ + + MTTGATIHTT GL
Sbjct: 501 DFKFIPFSGGPRKCVGDQFALMEAIVALAVFLQRLNVEL-VPDQTISMTTGATIHTTNGL 559
Query: 329 NMTVTRR 309
M V++R
Sbjct: 560 YMKVSQR 566
>gb|AAM13903.1| putative cytochrome P450 [Arabidopsis thaliana]
Length = 552
Score = 75.1 bits (183), Expect = 4e-13
Identities = 34/67 (50%), Positives = 49/67 (72%)
Frame = -3
Query: 509 NFRYLPFGGGQRKCIGDMFATFETVVALAMLVRRFNFQMAIGAPPVVMTTGATIHTTQGL 330
+F+++PF GG RKC+GD FA E +VALA+ ++R N ++ + + MTTGATIHTT GL
Sbjct: 487 DFKFIPFSGGPRKCVGDQFALMEAIVALAVFLQRLNVEL-VPDQTISMTTGATIHTTNGL 545
Query: 329 NMTVTRR 309
M V++R
Sbjct: 546 YMKVSQR 552
>gb|AAL73435.1|AF459441_1 cytochrome P450 [Skeletonema costatum]
Length = 659
Score = 73.9 bits (180), Expect = 1e-12
Identities = 35/74 (47%), Positives = 48/74 (64%)
Frame = -3
Query: 509 NFRYLPFGGGQRKCIGDMFATFETVVALAMLVRRFNFQMAIGAPPVVMTTGATIHTTQGL 330
++ +LPFG G+RKCIGD FA E V L+M++ +F+F + V M TGATIHT GL
Sbjct: 547 DYAFLPFGAGKRKCIGDQFAMLEASVTLSMIMNKFDFTLVGTPEDVGMKTGATIHTMNGL 606
Query: 329 NMTVTRRIQPPIVP 288
NM V+ R + +P
Sbjct: 607 NMMVSPRSETNPIP 620
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 494,348,578
Number of Sequences: 1393205
Number of extensions: 11517244
Number of successful extensions: 50785
Number of sequences better than 10.0: 1581
Number of HSP's better than 10.0 without gapping: 47465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50696
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15942513235
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
