Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014532A_C01 KMC014532A_c01
(584 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_196762.1| putative protein; protein id: At5g12010.1, supp... 148 6e-35
dbj|BAC05572.1| B1097D05.23 [Oryza sativa (japonica cultivar-gro... 134 8e-31
gb|AAM64474.1| unknown [Arabidopsis thaliana] 126 2e-28
ref|NP_567834.1| expressed protein; protein id: At4g29780.1, sup... 126 2e-28
gb|AAO22738.1| unknown protein [Arabidopsis thaliana] gi|2897363... 126 2e-28
>ref|NP_196762.1| putative protein; protein id: At5g12010.1, supported by cDNA:
gi_16604351 [Arabidopsis thaliana]
gi|11280502|pir||T48560 hypothetical protein F14F18.180
- Arabidopsis thaliana gi|7573368|emb|CAB87674.1|
putative protein [Arabidopsis thaliana]
gi|16604352|gb|AAL24182.1| AT5g12010/F14F18_180
[Arabidopsis thaliana] gi|25141199|gb|AAN73294.1|
At5g12010/F14F18_180 [Arabidopsis thaliana]
Length = 502
Score = 148 bits (373), Expect = 6e-35
Identities = 66/87 (75%), Positives = 81/87 (92%)
Frame = -3
Query: 582 RLKGRWSCLQKRTEVKLQDLPIVLGACCVLHNICEMKGDKIDPDLKLDLVDDEMVPEVAL 403
RLKGRW+CLQKRTEVKLQDLP VLGACCVLHNICEM+ +K++P+L ++++DDE++PE L
Sbjct: 416 RLKGRWACLQKRTEVKLQDLPTVLGACCVLHNICEMREEKMEPELMVEVIDDEVLPENVL 475
Query: 402 RSVSSMKARDAIAHNLLHHGLAGTSFL 322
RSV++MKARD I+HNLLHHGLAGTSFL
Sbjct: 476 RSVNAMKARDTISHNLLHHGLAGTSFL 502
>dbj|BAC05572.1| B1097D05.23 [Oryza sativa (japonica cultivar-group)]
Length = 551
Score = 134 bits (337), Expect = 8e-31
Identities = 59/86 (68%), Positives = 74/86 (85%)
Frame = -3
Query: 582 RLKGRWSCLQKRTEVKLQDLPIVLGACCVLHNICEMKGDKIDPDLKLDLVDDEMVPEVAL 403
RLK RW+CLQKRTEVKLQDLP+VLGACCVLHNICE +G++++P+L+ +LVDDE PE +
Sbjct: 465 RLKARWACLQKRTEVKLQDLPVVLGACCVLHNICETRGEELEPELRFELVDDETSPETPV 524
Query: 402 RSVSSMKARDAIAHNLLHHGLAGTSF 325
RS ++ +ARD IAHNLLH G AGT+F
Sbjct: 525 RSEAAKRARDNIAHNLLHRGFAGTTF 550
>gb|AAM64474.1| unknown [Arabidopsis thaliana]
Length = 515
Score = 126 bits (317), Expect = 2e-28
Identities = 59/87 (67%), Positives = 71/87 (80%)
Frame = -3
Query: 582 RLKGRWSCLQKRTEVKLQDLPIVLGACCVLHNICEMKGDKIDPDLKLDLVDDEMVPEVAL 403
RLKGRW+CLQKRTEVKLQDLP VLGACCVLHNICEM+ +++ P+LK ++ DD VPE +
Sbjct: 429 RLKGRWACLQKRTEVKLQDLPYVLGACCVLHNICEMRKEEMLPELKFEVFDDVAVPENNI 488
Query: 402 RSVSSMKARDAIAHNLLHHGLAGTSFL 322
RS S++ RD I+HNLLH GLAGT L
Sbjct: 489 RSASAVNTRDHISHNLLHRGLAGTRTL 515
>ref|NP_567834.1| expressed protein; protein id: At4g29780.1, supported by cDNA:
249769. [Arabidopsis thaliana] gi|7452044|pir||T08539
hypothetical protein F27B13.20 - Arabidopsis thaliana
gi|4914402|emb|CAB43653.1| hypothetical protein
[Arabidopsis thaliana] gi|7269877|emb|CAB79736.1|
hypothetical protein [Arabidopsis thaliana]
Length = 515
Score = 126 bits (317), Expect = 2e-28
Identities = 59/87 (67%), Positives = 71/87 (80%)
Frame = -3
Query: 582 RLKGRWSCLQKRTEVKLQDLPIVLGACCVLHNICEMKGDKIDPDLKLDLVDDEMVPEVAL 403
RLKGRW+CLQKRTEVKLQDLP VLGACCVLHNICEM+ +++ P+LK ++ DD VPE +
Sbjct: 429 RLKGRWACLQKRTEVKLQDLPYVLGACCVLHNICEMRKEEMLPELKFEVFDDVAVPENNI 488
Query: 402 RSVSSMKARDAIAHNLLHHGLAGTSFL 322
RS S++ RD I+HNLLH GLAGT L
Sbjct: 489 RSASAVNTRDHISHNLLHRGLAGTRTL 515
>gb|AAO22738.1| unknown protein [Arabidopsis thaliana] gi|28973634|gb|AAO64139.1|
unknown protein [Arabidopsis thaliana]
Length = 540
Score = 126 bits (317), Expect = 2e-28
Identities = 59/87 (67%), Positives = 71/87 (80%)
Frame = -3
Query: 582 RLKGRWSCLQKRTEVKLQDLPIVLGACCVLHNICEMKGDKIDPDLKLDLVDDEMVPEVAL 403
RLKGRW+CLQKRTEVKLQDLP VLGACCVLHNICEM+ +++ P+LK ++ DD VPE +
Sbjct: 454 RLKGRWACLQKRTEVKLQDLPYVLGACCVLHNICEMRKEEMLPELKFEVFDDVAVPENNI 513
Query: 402 RSVSSMKARDAIAHNLLHHGLAGTSFL 322
RS S++ RD I+HNLLH GLAGT L
Sbjct: 514 RSASAVNTRDHISHNLLHRGLAGTRTL 540
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 470,407,731
Number of Sequences: 1393205
Number of extensions: 9365058
Number of successful extensions: 21181
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 20583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21174
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21997688174
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
