Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014525A_C01 KMC014525A_c01
(551 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_175357.1| unknown protein; protein id: At1g49320.1 [Arabi... 115 4e-25
gb|AAL26909.1|AF319165_1 dehydration-responsive protein RD22 [Pr... 112 3e-24
dbj|BAA92225.1| similar to the BURP domain [Vigna unguiculata] 112 4e-24
pir||T07844 BURP domain-containing protein - rape gi|3098571|gb|... 111 7e-24
gb|AAL67991.1| dehydration-induced protein RD22-like protein [Go... 110 9e-24
>ref|NP_175357.1| unknown protein; protein id: At1g49320.1 [Arabidopsis thaliana]
gi|25372775|pir||D96529 probable RAB7 GTP-binding
Protein [imported] - Arabidopsis thaliana
gi|5430766|gb|AAD43166.1|AC007504_21 Putative BURP
domain containing protein [Arabidopsis thaliana]
Length = 280
Score = 115 bits (288), Expect = 4e-25
Identities = 49/100 (49%), Positives = 69/100 (69%), Gaps = 1/100 (1%)
Frame = -3
Query: 546 NYTILENIMRISAPKMVACHTMPYPYAVFYCHSQESENRVYKVSLVGDNG-DKVEAMVVC 370
NYT +E + KM+ CH MPYPYAV+YCH + +RV++V+LV D+G +V VC
Sbjct: 181 NYTFVEAPKELVGIKMLGCHRMPYPYAVYYCHGHKGGSRVFEVNLVTDDGRQRVVGPAVC 240
Query: 369 HLDTSHWGSGHVSFQILGVTPGSSSVCHFFPADNLIWAPK 250
H+DTS W + HV+F++L + P S+ VCHFFP DN++W K
Sbjct: 241 HMDTSTWDADHVAFKVLKMEPRSAPVCHFFPLDNIVWVTK 280
>gb|AAL26909.1|AF319165_1 dehydration-responsive protein RD22 [Prunus persica]
Length = 349
Score = 112 bits (280), Expect = 3e-24
Identities = 48/100 (48%), Positives = 66/100 (66%)
Frame = -3
Query: 549 QNYTILENIMRISAPKMVACHTMPYPYAVFYCHSQESENRVYKVSLVGDNGDKVEAMVVC 370
Q YTI + +++A K V CH YPYAVFYCH+ ++ R Y V L G +G + +A+ VC
Sbjct: 248 QKYTITPGVKKLAAGKSVVCHKQTYPYAVFYCHATKT-TRAYVVPLKGADGLEAKAVAVC 306
Query: 369 HLDTSHWGSGHVSFQILGVTPGSSSVCHFFPADNLIWAPK 250
H DTS W H++FQ+L V PG+ VCHF P D+++W PK
Sbjct: 307 HTDTSEWNPKHLAFQVLKVKPGTVPVCHFLPKDHIVWVPK 346
>dbj|BAA92225.1| similar to the BURP domain [Vigna unguiculata]
Length = 132
Score = 112 bits (279), Expect = 4e-24
Identities = 48/100 (48%), Positives = 63/100 (63%)
Frame = -3
Query: 549 QNYTILENIMRISAPKMVACHTMPYPYAVFYCHSQESENRVYKVSLVGDNGDKVEAMVVC 370
Q YTI + ++S V CH YPYAVFYCH E+ R Y V L G NG +V+A+ VC
Sbjct: 34 QQYTIAPGVKKVSGDNAVVCHKQSYPYAVFYCHKTET-TRTYPVPLEGANGIRVKAVAVC 92
Query: 369 HLDTSHWGSGHVSFQILGVTPGSSSVCHFFPADNLIWAPK 250
H DTS W H++F++L V PG+ VCHF P D+++W K
Sbjct: 93 HTDTSQWNPKHLAFEVLKVKPGTVPVCHFLPEDHVVWVQK 132
>pir||T07844 BURP domain-containing protein - rape gi|3098571|gb|AAC15700.1|
BURP domain containing protein [Brassica napus]
Length = 282
Score = 111 bits (277), Expect = 7e-24
Identities = 46/100 (46%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
Frame = -3
Query: 546 NYTILENIMRISAPKMVACHTMPYPYAVFYCHSQESENRVYKVSLVGDNGDK-VEAMVVC 370
NYT E + K++ CH MPYPY V+YCH +S +V++V+L+ D+G + V VC
Sbjct: 183 NYTFAEVPKELDGIKVLGCHRMPYPYVVYYCHGHKSGTKVFEVNLMSDDGIQLVVGPAVC 242
Query: 369 HLDTSHWGSGHVSFQILGVTPGSSSVCHFFPADNLIWAPK 250
H+DTS W + HV+F++L + P S+ VCHFFP DN++W K
Sbjct: 243 HMDTSMWNADHVAFKVLKIEPRSAPVCHFFPLDNIVWVSK 282
>gb|AAL67991.1| dehydration-induced protein RD22-like protein [Gossypium hirsutum]
Length = 335
Score = 110 bits (276), Expect = 9e-24
Identities = 48/100 (48%), Positives = 63/100 (63%)
Frame = -3
Query: 549 QNYTILENIMRISAPKMVACHTMPYPYAVFYCHSQESENRVYKVSLVGDNGDKVEAMVVC 370
Q YTI + +++ K V CH Y YAVFYCH E+ R Y V L G +G K +A+ VC
Sbjct: 237 QKYTIAAGVQKMTDDKAVVCHKQNYAYAVFYCHKSET-TRAYMVPLEGADGTKAKAVAVC 295
Query: 369 HLDTSHWGSGHVSFQILGVTPGSSSVCHFFPADNLIWAPK 250
H DTS W H++FQ+L V PG+ VCHF P D+++W PK
Sbjct: 296 HTDTSAWNPKHLAFQVLKVEPGTIPVCHFLPRDHIVWVPK 335
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 475,272,496
Number of Sequences: 1393205
Number of extensions: 10445815
Number of successful extensions: 29838
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 28854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29773
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19234190289
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
