Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014474A_C01 KMC014474A_c01
(736 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK64154.1| unknown protein [Arabidopsis thaliana] 194 8e-49
gb|AAM63097.1| unknown [Arabidopsis thaliana] 194 8e-49
ref|NP_194586.1| putative protein; protein id: At4g28570.1, supp... 194 8e-49
ref|NP_171895.1| unknown protein; protein id: At1g03990.1 [Arabi... 178 6e-44
pir||A86171 hypothetical protein [imported] - Arabidopsis thalia... 178 6e-44
>gb|AAK64154.1| unknown protein [Arabidopsis thaliana]
Length = 748
Score = 194 bits (494), Expect = 8e-49
Identities = 92/134 (68%), Positives = 110/134 (81%)
Frame = -3
Query: 734 RESLQTGLRKXLRILVAAGAVEVGTYRSDGQRIKCRGIKESDLEEFLDSVRVVGGPSSRN 555
RE+L+ GLR+ LR+ VAAGAVEVGTYRSDGQ++KC I + +EEFLD V VGG ++
Sbjct: 610 RENLRAGLRQALRVSVAAGAVEVGTYRSDGQKMKCEAITKEAMEEFLDEVDAVGGVGTKG 669
Query: 554 EVWTVFTSAHQMTSCRMSATEEEGAVDENGESWEAKGLYVCDGSVLPSAVGVNPMITIPS 375
E WT + SAHQM SCRM T EEGA+DENGESWEA+GL+VCDGS+LPSAVGVNPMITI S
Sbjct: 670 EYWTTYFSAHQMGSCRMGVTAEEGALDENGESWEAEGLFVCDGSILPSAVGVNPMITIQS 729
Query: 374 TAYCIASNIAESLK 333
TAYCI+S I +SL+
Sbjct: 730 TAYCISSKIVDSLQ 743
>gb|AAM63097.1| unknown [Arabidopsis thaliana]
Length = 748
Score = 194 bits (494), Expect = 8e-49
Identities = 92/134 (68%), Positives = 110/134 (81%)
Frame = -3
Query: 734 RESLQTGLRKXLRILVAAGAVEVGTYRSDGQRIKCRGIKESDLEEFLDSVRVVGGPSSRN 555
RE+L+ GLR+ LR+ VAAGAVEVGTYRSDGQ++KC I + +EEFLD V VGG ++
Sbjct: 610 RENLRAGLRQALRVSVAAGAVEVGTYRSDGQKMKCEAITKEAMEEFLDEVDAVGGVGTKG 669
Query: 554 EVWTVFTSAHQMTSCRMSATEEEGAVDENGESWEAKGLYVCDGSVLPSAVGVNPMITIPS 375
E WT + SAHQM SCRM T EEGA+DENGESWEA+GL+VCDGS+LPSAVGVNPMITI S
Sbjct: 670 EYWTTYFSAHQMGSCRMGVTAEEGALDENGESWEAEGLFVCDGSILPSAVGVNPMITIQS 729
Query: 374 TAYCIASNIAESLK 333
TAYCI+S I +SL+
Sbjct: 730 TAYCISSKIVDSLQ 743
>ref|NP_194586.1| putative protein; protein id: At4g28570.1, supported by cDNA: 19314.,
supported by cDNA: gi_14532705 [Arabidopsis thaliana]
gi|7487681|pir||T10651 hypothetical protein T5F17.20 -
Arabidopsis thaliana gi|7269712|emb|CAB81445.1| putative
protein [Arabidopsis thaliana]
gi|22798798|emb|CAC87644.1| alcohol oxidase [Arabidopsis
thaliana] gi|25054929|gb|AAN71941.1| unknown protein
[Arabidopsis thaliana]
Length = 748
Score = 194 bits (494), Expect = 8e-49
Identities = 92/134 (68%), Positives = 110/134 (81%)
Frame = -3
Query: 734 RESLQTGLRKXLRILVAAGAVEVGTYRSDGQRIKCRGIKESDLEEFLDSVRVVGGPSSRN 555
RE+L+ GLR+ LR+ VAAGAVEVGTYRSDGQ++KC I + +EEFLD V VGG ++
Sbjct: 610 RENLRAGLRQALRVSVAAGAVEVGTYRSDGQKMKCEAITKEAMEEFLDEVDAVGGVGTKG 669
Query: 554 EVWTVFTSAHQMTSCRMSATEEEGAVDENGESWEAKGLYVCDGSVLPSAVGVNPMITIPS 375
E WT + SAHQM SCRM T EEGA+DENGESWEA+GL+VCDGS+LPSAVGVNPMITI S
Sbjct: 670 EYWTTYFSAHQMGSCRMGVTAEEGALDENGESWEAEGLFVCDGSILPSAVGVNPMITIQS 729
Query: 374 TAYCIASNIAESLK 333
TAYCI+S I +SL+
Sbjct: 730 TAYCISSKIVDSLQ 743
>ref|NP_171895.1| unknown protein; protein id: At1g03990.1 [Arabidopsis thaliana]
Length = 559
Score = 178 bits (452), Expect = 6e-44
Identities = 87/134 (64%), Positives = 106/134 (78%)
Frame = -3
Query: 731 ESLQTGLRKXLRILVAAGAVEVGTYRSDGQRIKCRGIKESDLEEFLDSVRVVGGPSSRNE 552
E+L GL++ LRILVAAGA EVGTYRSDGQR+KC GIK+ DLE FLD+V G S ++
Sbjct: 422 ENLTIGLKQALRILVAAGAAEVGTYRSDGQRMKCDGIKQKDLEAFLDTVNAPPGVVSMSK 481
Query: 551 VWTVFTSAHQMTSCRMSATEEEGAVDENGESWEAKGLYVCDGSVLPSAVGVNPMITIPST 372
WT +AHQ+ CRM ATE+EGA+D GESWEA+ LYVCD SVLP+A+GVNPMIT+ ST
Sbjct: 482 HWTQSFTAHQIGCCRMGATEKEGAIDGKGESWEAEDLYVCDASVLPTALGVNPMITVQST 541
Query: 371 AYCIASNIAESLKK 330
AYCI++ IAE +KK
Sbjct: 542 AYCISNRIAELMKK 555
>pir||A86171 hypothetical protein [imported] - Arabidopsis thaliana
gi|4204315|gb|AAD10696.1| Unknown protein [Arabidopsis
thaliana]
Length = 736
Score = 178 bits (452), Expect = 6e-44
Identities = 87/134 (64%), Positives = 106/134 (78%)
Frame = -3
Query: 731 ESLQTGLRKXLRILVAAGAVEVGTYRSDGQRIKCRGIKESDLEEFLDSVRVVGGPSSRNE 552
E+L GL++ LRILVAAGA EVGTYRSDGQR+KC GIK+ DLE FLD+V G S ++
Sbjct: 599 ENLTIGLKQALRILVAAGAAEVGTYRSDGQRMKCDGIKQKDLEAFLDTVNAPPGVVSMSK 658
Query: 551 VWTVFTSAHQMTSCRMSATEEEGAVDENGESWEAKGLYVCDGSVLPSAVGVNPMITIPST 372
WT +AHQ+ CRM ATE+EGA+D GESWEA+ LYVCD SVLP+A+GVNPMIT+ ST
Sbjct: 659 HWTQSFTAHQIGCCRMGATEKEGAIDGKGESWEAEDLYVCDASVLPTALGVNPMITVQST 718
Query: 371 AYCIASNIAESLKK 330
AYCI++ IAE +KK
Sbjct: 719 AYCISNRIAELMKK 732
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 638,743,800
Number of Sequences: 1393205
Number of extensions: 14077803
Number of successful extensions: 55480
Number of sequences better than 10.0: 153
Number of HSP's better than 10.0 without gapping: 52506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55406
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 34906576228
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
