Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014442A_C01 KMC014442A_c01
(641 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO73866.1|AF503360_1 putative NADH-dependent hydroxypyruvate... 219 2e-56
gb|AAO73867.1|AF503361_1 putative NADH-dependent hydroxypyruvate... 214 1e-54
dbj|BAB44155.1| hydroxypyruvate reductase [Bruguiera gymnorrhiza] 205 5e-52
pir||S68164 glycerate dehydrogenase (EC 1.1.1.29) splice form HP... 204 6e-52
ref|NP_176968.1| hydroxypyruvate reductase (HPR); protein id: At... 202 4e-51
>gb|AAO73866.1|AF503360_1 putative NADH-dependent hydroxypyruvate reductase [Glycine max]
Length = 386
Score = 219 bits (559), Expect = 2e-56
Identities = 110/115 (95%), Positives = 113/115 (97%)
Frame = -1
Query: 641 GPVIDEAALVEHLRQNPMFRVGLDVFEEEPYMKPGLAELKNAIVVPHIASASKWTREGMA 462
GPVIDEAALVEHL+QNPMFRVGLDVFEEEPYMKPGLAELKNAIVVPHIASASKWTREGMA
Sbjct: 274 GPVIDEAALVEHLKQNPMFRVGLDVFEEEPYMKPGLAELKNAIVVPHIASASKWTREGMA 333
Query: 461 TLAALNVLGKIKGYPVWFDANKVEPFLDENAQPPAASPSIVNAKALGLPVSTSKL 297
TLAALNVLGKIKGYPVWFDAN+VEPFL+ENAQPPAASPSIVNAKALGLP TSKL
Sbjct: 334 TLAALNVLGKIKGYPVWFDANRVEPFLNENAQPPAASPSIVNAKALGLP--TSKL 386
>gb|AAO73867.1|AF503361_1 putative NADH-dependent hydroxypyruvate reductase [Glycine max]
Length = 386
Score = 214 bits (544), Expect = 1e-54
Identities = 106/115 (92%), Positives = 111/115 (96%)
Frame = -1
Query: 641 GPVIDEAALVEHLRQNPMFRVGLDVFEEEPYMKPGLAELKNAIVVPHIASASKWTREGMA 462
GPVIDEAALVEHL+ NPMFRVGLDVFEEEPYMKPGLAELKNAIVVPHIASASKWTREGMA
Sbjct: 274 GPVIDEAALVEHLKHNPMFRVGLDVFEEEPYMKPGLAELKNAIVVPHIASASKWTREGMA 333
Query: 461 TLAALNVLGKIKGYPVWFDANKVEPFLDENAQPPAASPSIVNAKALGLPVSTSKL 297
TLAALNVLGK+KGYPVWFDAN+VEPFL+ENA+PPAA PSIVNAKALGLP TSKL
Sbjct: 334 TLAALNVLGKVKGYPVWFDANRVEPFLNENARPPAACPSIVNAKALGLP--TSKL 386
>dbj|BAB44155.1| hydroxypyruvate reductase [Bruguiera gymnorrhiza]
Length = 386
Score = 205 bits (521), Expect = 5e-52
Identities = 99/111 (89%), Positives = 106/111 (95%)
Frame = -1
Query: 641 GPVIDEAALVEHLRQNPMFRVGLDVFEEEPYMKPGLAELKNAIVVPHIASASKWTREGMA 462
GPVIDE ALVEHLR+NPMFRVGLDVFE+EPYMKPGLA++KNAIVVPHIASASKWTREGMA
Sbjct: 274 GPVIDEVALVEHLRRNPMFRVGLDVFEDEPYMKPGLADMKNAIVVPHIASASKWTREGMA 333
Query: 461 TLAALNVLGKIKGYPVWFDANKVEPFLDENAQPPAASPSIVNAKALGLPVS 309
TLAALNVLGKIKGYPVW D N+VEPFL+ENA PPAA PSIVN+KALGLPVS
Sbjct: 334 TLAALNVLGKIKGYPVWGDPNRVEPFLNENAPPPAACPSIVNSKALGLPVS 384
>pir||S68164 glycerate dehydrogenase (EC 1.1.1.29) splice form HPR1, microbody -
Cucurbita cv. Kurokawa Amakuri
gi|1304042|dbj|BAA08410.1| hydroxypyruvate reductase
[Cucurbita cv. Kurokawa Amakuri]
Length = 386
Score = 204 bits (520), Expect = 6e-52
Identities = 99/111 (89%), Positives = 106/111 (95%)
Frame = -1
Query: 641 GPVIDEAALVEHLRQNPMFRVGLDVFEEEPYMKPGLAELKNAIVVPHIASASKWTREGMA 462
GPVIDEAALVEHL++NPMFRVGLDVFE+EPYMKPGLA++KNAI+VPHIASASKWTREGMA
Sbjct: 274 GPVIDEAALVEHLKENPMFRVGLDVFEDEPYMKPGLADMKNAIIVPHIASASKWTREGMA 333
Query: 461 TLAALNVLGKIKGYPVWFDANKVEPFLDENAQPPAASPSIVNAKALGLPVS 309
TLAALNVLGKIK YPVW D N+VEPFLDENA PPAASPSIVNAKAL LPVS
Sbjct: 334 TLAALNVLGKIKQYPVWADPNRVEPFLDENAPPPAASPSIVNAKALELPVS 384
>ref|NP_176968.1| hydroxypyruvate reductase (HPR); protein id: At1g68010.1, supported
by cDNA: gi_13877916, supported by cDNA: gi_20466172,
supported by cDNA: gi_2055272, supported by cDNA:
gi_21280880 [Arabidopsis thaliana]
gi|25283937|pir||B96703 hydroxypyruvate reductase (HPR),
50972-48670 [imported] - Arabidopsis thaliana
gi|12324078|gb|AAG52006.1|AC012563_16 hydroxypyruvate
reductase (HPR); 50972-48670 [Arabidopsis thaliana]
gi|13877917|gb|AAK44036.1|AF370221_1 putative
hydroxypyruvate reductase HPR [Arabidopsis thaliana]
gi|20466173|gb|AAM20404.1| hydroxypyruvate reductase
(HPR) [Arabidopsis thaliana] gi|21280881|gb|AAM44919.1|
putative hydroxypyruvate reductase [Arabidopsis
thaliana] gi|24899819|gb|AAN65124.1| hydroxypyruvate
reductase (HPR) [Arabidopsis thaliana]
Length = 386
Score = 202 bits (513), Expect = 4e-51
Identities = 95/111 (85%), Positives = 106/111 (94%)
Frame = -1
Query: 641 GPVIDEAALVEHLRQNPMFRVGLDVFEEEPYMKPGLAELKNAIVVPHIASASKWTREGMA 462
GPVIDEAALVEHL++NPMFRVGLDVFEEEP+MKPGLA+ KNAIVVPHIASASKWTREGMA
Sbjct: 274 GPVIDEAALVEHLKENPMFRVGLDVFEEEPFMKPGLADTKNAIVVPHIASASKWTREGMA 333
Query: 461 TLAALNVLGKIKGYPVWFDANKVEPFLDENAQPPAASPSIVNAKALGLPVS 309
TLAALNVLG++KGYP+W D N+V+PFL+ENA PP ASPSIVN+KALGLPVS
Sbjct: 334 TLAALNVLGRVKGYPIWHDPNRVDPFLNENASPPNASPSIVNSKALGLPVS 384
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 544,262,889
Number of Sequences: 1393205
Number of extensions: 11757396
Number of successful extensions: 26361
Number of sequences better than 10.0: 421
Number of HSP's better than 10.0 without gapping: 25438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26284
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27007650415
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
