Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014405A_C01 KMC014405A_c01
(534 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T06458 nucleolin homolog - garden pea gi|940288|gb|AAA74208... 157 8e-38
pir||T09648 nucleolin homolog nuM1 - alfalfa gi|1279563|emb|CAA6... 127 1e-28
dbj|BAC02896.1| tobacco nucleolin [Nicotiana tabacum] 113 1e-24
ref|NP_188491.1| nucleolin, putative; protein id: At3g18610.1 [A... 95 5e-19
ref|NP_175322.1| nucleolin, putative; protein id: At1g48920.1 [A... 91 7e-18
>pir||T06458 nucleolin homolog - garden pea gi|940288|gb|AAA74208.1| protein
localized in the nucleoli of pea nuclei; ORF; putative
Length = 611
Score = 157 bits (397), Expect = 8e-38
Identities = 101/162 (62%), Positives = 115/162 (70%), Gaps = 12/162 (7%)
Frame = +1
Query: 82 MPKSSKKSATKVEAAAPVAAAPKSAKKAKRAAEDEVEKQVSAKKQKIAEVAAKQKKETKL 261
M KSSKKSATKV+AA V + KS KK KR AE+E+ K+VSAKKQK+ EV AKQKKE +
Sbjct: 1 MGKSSKKSATKVDAAPVVVSPVKSGKKGKRQAEEEI-KKVSAKKQKVEEVIAKQKKEAVV 59
Query: 262 QKVKKESSSDDDSS-SEDEKPAPK-VAPL-KTSVKNGTTPAKKAKPAPSS--SSSDEDSS 426
QKVK ESSS++DSS SEDEKP K AP+ KT KNG AKKAKP SS S SDED S
Sbjct: 60 QKVKDESSSEEDSSESEDEKPVVKPAAPVKKTPAKNGN--AKKAKPDSSSSDSESDEDES 117
Query: 427 DEEEEVIAKKPTKVVV-------PKKEESSSDEDSSSDEDSS 531
+E++V AKKP KV V PKKEESS + D SDEDSS
Sbjct: 118 SDEDDVSAKKPAKVAVAAKPKQAPKKEESSDESDDESDEDSS 159
Score = 93.6 bits (231), Expect = 1e-18
Identities = 75/175 (42%), Positives = 93/175 (52%), Gaps = 24/175 (13%)
Frame = +1
Query: 73 RVKMPKSSKKSATK-------VEAAAPVAAAPK---SAKKAK--------RAAEDEV--E 192
+VK SS++ +++ V+ AAPV P +AKKAK + EDE E
Sbjct: 61 KVKDESSSEEDSSESEDEKPVVKPAAPVKKTPAKNGNAKKAKPDSSSSDSESDEDESSDE 120
Query: 193 KQVSAKKQKIAEVAAKQKKETKLQKVKKESSSD-DDSSSEDEKPAPKVAPLKTSVKNGTT 369
VSAKK VAAK K+ K ++ ES + D+ SSEDEKPAPK P KNG+
Sbjct: 121 DDVSAKKPAKVAVAAKPKQAPKKEESSDESDDESDEDSSEDEKPAPKAVP----AKNGSA 176
Query: 370 PAKKAKPAPSSSSSDEDSSDEEEEVIAKKPTKVVVP---KKEESSSDEDSSSDED 525
PAKKA + S SDEDSS +EE AK V P KK+ SSD DSS D D
Sbjct: 177 PAKKA-ASSSDEESDEDSSSDEEAPKAKVVPAAVKPAAAKKKAESSDSDSSEDSD 230
Score = 67.4 bits (163), Expect = 1e-10
Identities = 54/167 (32%), Positives = 77/167 (45%), Gaps = 20/167 (11%)
Frame = +1
Query: 94 SKKSATKVEAAAPVAAAPKS----AKKAKRAAEDEVEKQVS----AKKQKIAEVAAKQKK 249
S + +++ E AP A K+ AKKA ++++E ++ S A K K+ A K
Sbjct: 154 SDEDSSEDEKPAPKAVPAKNGSAPAKKAASSSDEESDEDSSSDEEAPKAKVVPAAVKPAA 213
Query: 250 ETKLQKVKKESSSDDDSSSEDEKPAPKVAPLKTSVKNGTTPAKKAKPAPSSSSSDEDSSD 429
KK++ S D SSED P T+V AKK + SS +EDSS
Sbjct: 214 ------AKKKAESSDSDSSEDSDDEEDTKPTVTAVSKSAAVAKKTEDDDEDSSDEEDSSS 267
Query: 430 EEEEVIAKKPT----KVVVPKKEE--------SSSDEDSSSDEDSSS 534
+E+ +K V V KKE+ S SDE+S SDE+S S
Sbjct: 268 DEDNKTSKPSNGNKKPVTVSKKEDKMNVDKDSSDSDEESDSDEESES 314
Score = 43.5 bits (101), Expect = 0.002
Identities = 40/151 (26%), Positives = 67/151 (43%), Gaps = 9/151 (5%)
Frame = +1
Query: 91 SSKKSATKVEAAAPVAAAPKSAKKAKRAAEDEVEKQVSAKKQKIAEVAAKQKKETKLQKV 270
SS + A K + P A P +AKK +++ + + ++ V A K +K
Sbjct: 194 SSDEEAPKAKVV-PAAVKPAAAKKKAESSDSDSSEDSDDEEDTKPTVTAVSKSAAVAKKT 252
Query: 271 K---KESSSDDDSSSEDEKPAPKVA-----PLKTSVKNGTTPAKK-AKPAPSSSSSDEDS 423
+ ++SS ++DSSS+++ K + P+ S K K + + S SDE+S
Sbjct: 253 EDDDEDSSDEEDSSSDEDNKTSKPSNGNKKPVTVSKKEDKMNVDKDSSDSDEESDSDEES 312
Query: 424 SDEEEEVIAKKPTKVVVPKKEESSSDEDSSS 516
E+E +K P K K+ D D SS
Sbjct: 313 ESEDEP--SKTPQK---KTKDVEMIDADKSS 338
Score = 35.4 bits (80), Expect = 0.43
Identities = 34/127 (26%), Positives = 53/127 (40%), Gaps = 16/127 (12%)
Frame = +1
Query: 91 SSKKSATKVEAAAPVAAAPKSAKKAKRAAEDEV-----EKQVSAKKQKIAEVAAKQKKET 255
SS+ S + + V A KSA AK+ +D+ E S + K ++ + KK
Sbjct: 225 SSEDSDDEEDTKPTVTAVSKSAAVAKKTEDDDEDSSDEEDSSSDEDNKTSKPSNGNKKPV 284
Query: 256 KLQK------VKKESS-----SDDDSSSEDEKPAPKVAPLKTSVKNGTTPAKKAKPAPSS 402
+ K V K+SS SD D SE E K KT K +K AP++
Sbjct: 285 TVSKKEDKMNVDKDSSDSDEESDSDEESESEDEPSKTPQKKTKDVEMIDADKSSKKAPAT 344
Query: 403 SSSDEDS 423
++ ++
Sbjct: 345 PATPSEN 351
>pir||T09648 nucleolin homolog nuM1 - alfalfa gi|1279563|emb|CAA61298.1| nuM1
[Medicago sativa]
Length = 635
Score = 127 bits (318), Expect = 1e-28
Identities = 91/164 (55%), Positives = 104/164 (62%), Gaps = 14/164 (8%)
Frame = +1
Query: 82 MPKSSKKSATKVEAAAPVAAAPKSAKKAKRAAEDEVEKQVSAKKQKIAEVAAKQKKETKL 261
MPKSSKKSATKV+AA V + KS KK KR AE+EV K VSAKKQK+ EVAAKQK L
Sbjct: 1 MPKSSKKSATKVDAAPVVVSPVKSGKKGKRQAEEEV-KAVSAKKQKVEEVAAKQK---AL 56
Query: 262 QKVKKESSSDDDSS--SEDEKPAPKV-AP-LKTSVKNGTTPAKKAKPAPSSSSSDED--S 423
+ VKKE SS ++SS SEDEKP K AP KT KNG KKA+P +S SD D S
Sbjct: 57 KVVKKEESSSEESSEESEDEKPVAKAPAPSKKTPAKNGN--VKKAQPETTSEESDSDDIS 114
Query: 424 SDEEEEVIAKKPTKVVVP--------KKEESSSDEDSSSDEDSS 531
SDEEE KKP VP KK++ SS+EDS +SS
Sbjct: 115 SDEEE---VKKPAAKAVPSKNGSAPVKKDDESSEEDSDESSESS 155
Score = 75.5 bits (184), Expect = 4e-13
Identities = 62/173 (35%), Positives = 89/173 (50%), Gaps = 24/173 (13%)
Frame = +1
Query: 79 KMPKSSKKSATKVEAAAPVAAAPKSAKKA------------KRAAEDEVEKQVSAKKQKI 222
K SS++S+ + E PVA AP +KK + +E+ +S+ ++++
Sbjct: 61 KEESSSEESSEESEDEKPVAKAPAPSKKTPAKNGNVKKAQPETTSEESDSDDISSDEEEV 120
Query: 223 AEVAAK---QKKETKLQKVKKESSSDD-----DSSSEDEKPAPKVAPLKTSVKNGTTPAK 378
+ AAK K + K ESS +D +SS ED+KPA K P K NG+ PAK
Sbjct: 121 KKPAAKAVPSKNGSAPVKKDDESSEEDSDESSESSDEDKKPAAKAVPSK----NGSAPAK 176
Query: 379 KAKPAPSSSSSDEDSSDEEEEVIAKKPTKV---VVPKKEESSSDEDS-SSDED 525
K SS D + SDE+E+ AK + V KK++SSSDEDS SSDE+
Sbjct: 177 KDD---SSEEEDSEDSDEDEKPAAKAVSSKNGSVSAKKDDSSSDEDSESSDEE 226
Score = 70.1 bits (170), Expect = 2e-11
Identities = 55/152 (36%), Positives = 76/152 (49%), Gaps = 7/152 (4%)
Frame = +1
Query: 91 SSKKSATKVEAAAPVAAAPKSAKKAKRAAEDEVEKQVSAKKQKIAEVAAKQKKETKLQKV 270
S K AA V + SA K + +E + + S + +K A A K + K
Sbjct: 152 SESSDEDKKPAAKAVPSKNGSAPAKKDDSSEEEDSEDSDEDEKPAAKAVSSKNGSVSAK- 210
Query: 271 KKESSSDDDSSS---EDEKPAPKVAPLKTSVKNGTTPAKKAKPAPSSSSSDEDSSDEEEE 441
K +SSSD+DS S ED+KPA K + KN + P KKA + S SDE+S ++E+
Sbjct: 211 KDDSSSDEDSESSDEEDKKPAAKAS------KNVSAPTKKAASS-SDEESDEESDEDEDA 263
Query: 442 VIAKKPTKVVVPKKEESS----SDEDSSSDED 525
KP V K++SS D+DSSSDED
Sbjct: 264 KPVSKPAAVAKKSKKDSSDSDDEDDDSSSDED 295
Score = 68.6 bits (166), Expect = 5e-11
Identities = 61/157 (38%), Positives = 76/157 (47%), Gaps = 9/157 (5%)
Frame = +1
Query: 91 SSKKSATKVEAAAPVAAAPKSA---KKAKRAAEDEVEKQVSAKKQKIAEVAAKQKKETKL 261
SS + K AA V + SA K + + ED E S+ + K A K
Sbjct: 114 SSDEEEVKKPAAKAVPSKNGSAPVKKDDESSEEDSDESSESSDEDKKPAAKAVPSKNGSA 173
Query: 262 QKVKKESSSDDDS--SSEDEKPAPKVAPLKTSVKNGTTPAKKAKPAPSSSSSDEDSSDEE 435
K +SS ++DS S EDEKPA K S KNG+ AKK SSS D +SSDEE
Sbjct: 174 PAKKDDSSEEEDSEDSDEDEKPAAKAV----SSKNGSVSAKKDD---SSSDEDSESSDEE 226
Query: 436 EEVIAKKPTKVVVP--KKEESSSDE--DSSSDEDSSS 534
++ A K +K V KK SSSDE D SDED +
Sbjct: 227 DKKPAAKASKNVSAPTKKAASSSDEESDEESDEDEDA 263
Score = 53.1 bits (126), Expect = 2e-06
Identities = 44/127 (34%), Positives = 59/127 (45%), Gaps = 3/127 (2%)
Frame = +1
Query: 151 SAKKAKRAAEDEVEKQVSAKKQKIAEVAAKQKKETKLQKVKKESSSDDDS---SSEDEKP 321
SAKK +++++ E K+ AAK K K SSSD++S S EDE
Sbjct: 208 SAKKDDSSSDEDSESSDEEDKKP----AAKASKNVSAPTKKAASSSDEESDEESDEDEDA 263
Query: 322 APKVAPLKTSVKNGTTPAKKAKPAPSSSSSDEDSSDEEEEVIAKKPTKVVVPKKEESSSD 501
P V AKK+K S S ++D S +E+ KKP V KKE S S+
Sbjct: 264 KP--------VSKPAAVAKKSKKDSSDSDDEDDDSSSDED---KKP---VASKKEVSESE 309
Query: 502 EDSSSDE 522
DSS D+
Sbjct: 310 SDSSDDD 316
Score = 51.6 bits (122), Expect = 6e-06
Identities = 39/128 (30%), Positives = 57/128 (44%)
Frame = +1
Query: 88 KSSKKSATKVEAAAPVAAAPKSAKKAKRAAEDEVEKQVSAKKQKIAEVAAKQKKETKLQK 267
K + K++ V A AA+ + + + EDE K VS K A VA K KK++
Sbjct: 229 KPAAKASKNVSAPTKKAASSSDEESDEESDEDEDAKPVS----KPAAVAKKSKKDSS--- 281
Query: 268 VKKESSSDDDSSSEDEKPAPKVAPLKTSVKNGTTPAKKAKPAPSSSSSDEDSSDEEEEVI 447
+ DD SS ED+KP + S + + K SS SDE + E+E +
Sbjct: 282 -DSDDEDDDSSSDEDKKPVASKKEVSESESDSSDDDHKMNIDKDSSDSDESEEESEDEPL 340
Query: 448 AKKPTKVV 471
K P K +
Sbjct: 341 -KTPQKKI 347
Score = 41.6 bits (96), Expect = 0.006
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 10/123 (8%)
Frame = +1
Query: 88 KSSKKSATKVEAAAPVAAAPKSAKKAKRAAED----------EVEKQVSAKKQKIAEVAA 237
+ S + + + E A PV+ AKK+K+ + D + +K+ A K++++E +
Sbjct: 251 EESDEESDEDEDAKPVSKPAAVAKKSKKDSSDSDDEDDDSSSDEDKKPVASKKEVSESES 310
Query: 238 KQKKETKLQKVKKESSSDDDSSSEDEKPAPKVAPLKTSVKNGTTPAKKAKPAPSSSSSDE 417
+ + K+SS D+S E E K K K K AP++ ++
Sbjct: 311 DSSDDDHKMNIDKDSSDSDESEEESEDEPLKTPQKKIKDVEMVDAGKSGKKAPNTPATPN 370
Query: 418 DSS 426
++S
Sbjct: 371 ETS 373
>dbj|BAC02896.1| tobacco nucleolin [Nicotiana tabacum]
Length = 620
Score = 113 bits (283), Expect = 1e-24
Identities = 86/193 (44%), Positives = 103/193 (52%), Gaps = 42/193 (21%)
Frame = +1
Query: 82 MPKSSKKSATKVEAAAPVAAAPKSAKKAKRAAEDEVEKQVSAKKQK----IAEVAAKQKK 249
M KS+KKSATKV+AA V A K KK KR A +E+EK +SAKKQK +A+ K+K
Sbjct: 1 MVKSAKKSATKVDAA--VVAPTKPLKKGKREAGEEIEKIMSAKKQKKDMAVAQAVEKKKS 58
Query: 250 ETKLQKVKKE--SSSDDDSSSEDEKPAPKVAPLK-------------------------- 345
+TK QK KK+ SSSDD S SEDEKP VAP K
Sbjct: 59 DTKTQKKKKQESSSSDDSSESEDEKPTKAVAPPKKVAPAKYGKLASSSDDSDSSDEDDAP 118
Query: 346 -------TSVKNGTTPAKKAKPAPSSSSSDEDSSDEEEEVIAKKPT---KVVVPKKEESS 495
S KNG KK + + SSS D DSS EE+ AKKP V KK+ESS
Sbjct: 119 PPKKVVAASAKNGVAAMKKDESSDDSSSED-DSSSEEDVPAAKKPAANGSAAVSKKDESS 177
Query: 496 SDEDSSSDEDSSS 534
+ SSS++DSSS
Sbjct: 178 --DQSSSEDDSSS 188
Score = 67.4 bits (163), Expect = 1e-10
Identities = 53/150 (35%), Positives = 72/150 (47%), Gaps = 5/150 (3%)
Frame = +1
Query: 100 KSATKVEAAAPVAAAPKSAKKAKRAAEDEV--EKQVSAKKQKIAEVAAKQKKETKLQKVK 273
K A VAA K ++ED+ E+ V A K+ A +A K+ +
Sbjct: 121 KKVVAASAKNGVAAMKKDESSDDSSSEDDSSSEEDVPAAKKPAANGSAAVSKK---DESS 177
Query: 274 KESSSDDDSSSEDEKPAPKVAPLKTSVKNGTTPAKKAKPAPSSSSSDEDSSDEEE---EV 444
+SSS+DDSSSED+ A K AP K G A K S SSD+ SSD++E +V
Sbjct: 178 DQSSSEDDSSSEDDAVAKKTAP-----KKGLAAAASKKEESSEDSSDDSSSDDDEPASKV 232
Query: 445 IAKKPTKVVVPKKEESSSDEDSSSDEDSSS 534
A +P K KK S+E S ++DS S
Sbjct: 233 AAAQPAKAA--KKTGDGSEETDSDEDDSDS 260
Score = 65.9 bits (159), Expect = 3e-10
Identities = 51/154 (33%), Positives = 72/154 (46%), Gaps = 8/154 (5%)
Frame = +1
Query: 88 KSSKKSATKVEAAAPVAAAPKSAKKAKRAAEDEVEKQVSAK--KQKIAEVAAKQKKETKL 261
+S + TK A A K K A + + + + A K+ +A A K
Sbjct: 78 ESEDEKPTKAVAPPKKVAPAKYGKLASSSDDSDSSDEDDAPPPKKVVAASAKNGVAAMKK 137
Query: 262 QKVKKESSSDDDSSSEDEKPAPKVAPLKTSVKNGTTPAKKAKPAPSSSSSDEDSSDEEEE 441
+ +SSS+DDSSSE++ PA K NG+ K + SSS++DSS E++
Sbjct: 138 DESSDDSSSEDDSSSEEDVPA-----AKKPAANGSAAVSKKDESSDQSSSEDDSSSEDDA 192
Query: 442 VIAKKPTK----VVVPKKEESSSD--EDSSSDED 525
V K K KKEESS D +DSSSD+D
Sbjct: 193 VAKKTAPKKGLAAAASKKEESSEDSSDDSSSDDD 226
Score = 64.7 bits (156), Expect = 7e-10
Identities = 60/185 (32%), Positives = 81/185 (43%), Gaps = 40/185 (21%)
Frame = +1
Query: 91 SSKKSATKVEAAAPVAAAPKSAKKAKRAAEDEVEKQVSAKKQKIAEVAAKQKKETKLQKV 270
SS + + E P A P + A + +DE Q S++ +E A KK + +
Sbjct: 144 SSSEDDSSSEEDVPAAKKPAANGSAAVSKKDESSDQSSSEDDSSSEDDAVAKKTAPKKGL 203
Query: 271 ------KKESSSD--DDSSSEDEKPAPKVA---PLKTSVKNG------------------ 363
K+ESS D DDSSS+D++PA KVA P K + K G
Sbjct: 204 AAAASKKEESSEDSSDDSSSDDDEPASKVAAAQPAKAAKKTGDGSEETDSDEDDSDSDVD 263
Query: 364 ---TTPAKKAKPAPSSSSSDEDSSDEEEEVIAKK-----PTKVVVPKKE---ESSSDEDS 510
K K SS SSDE+S + +EE KK T V KKE E SS+ED
Sbjct: 264 KGKAAAVSKKKVESSSDSSDEESEESDEEGSQKKKIKPSSTPATVSKKESSSEESSEEDE 323
Query: 511 SSDED 525
S +E+
Sbjct: 324 SEEEE 328
Score = 60.5 bits (145), Expect = 1e-08
Identities = 47/139 (33%), Positives = 66/139 (46%)
Frame = +1
Query: 106 ATKVEAAAPVAAAPKSAKKAKRAAEDEVEKQVSAKKQKIAEVAAKQKKETKLQKVKKESS 285
A+KV AA P AA K+ ++ DE + K K A V+ K K ESS
Sbjct: 229 ASKVAAAQPAKAAKKTGDGSEETDSDEDDSDSDVDKGKAAAVSKK----------KVESS 278
Query: 286 SDDDSSSEDEKPAPKVAPLKTSVKNGTTPAKKAKPAPSSSSSDEDSSDEEEEVIAKKPTK 465
SD SS E+ + + + K +K +TPA +K SS S E+ EEEE +KP+K
Sbjct: 279 SD--SSDEESEESDEEGSQKKKIKPSSTPATVSKKESSSEESSEEDESEEEE--DQKPSK 334
Query: 466 VVVPKKEESSSDEDSSSDE 522
PKK+ D+ S +
Sbjct: 335 --TPKKDADVEMVDADSSK 351
>ref|NP_188491.1| nucleolin, putative; protein id: At3g18610.1 [Arabidopsis thaliana]
Length = 636
Score = 95.1 bits (235), Expect = 5e-19
Identities = 66/167 (39%), Positives = 90/167 (53%), Gaps = 18/167 (10%)
Frame = +1
Query: 82 MPKSSKKSATKVEAAAPVAAAPKSAKKAKRAAEDEVEKQVSAKKQK-IAEVAAKQKKETK 258
M KSSKKS T+VE A + K KK KR AE++++ QV+ K++K + +V K+K E
Sbjct: 1 MGKSSKKSVTEVETPASMT---KPLKKGKRDAEEDLDMQVTKKQKKELIDVVQKEKAEKT 57
Query: 259 LQKVKKESSSDDDSSSEDEKPAPKVAPLKTS-----------------VKNGTTPAKKAK 387
+ K + SSSD S E+EK + LK K P KKAK
Sbjct: 58 VPKKVESSSSDASDSDEEEKTKETPSKLKDESSSEEEDDSSSDEEIAPAKKRPEPIKKAK 117
Query: 388 PAPSSSSSDEDSSDEEEEVIAKKPTKVVVPKKEESSSDEDSSSDEDS 528
SSSS D+ +SDEE + K+P + K E SSSD+DSSSDE++
Sbjct: 118 -VESSSSDDDSTSDEETAPVKKQPAVLEKAKVESSSSDDDSSSDEET 163
Score = 84.0 bits (206), Expect = 1e-15
Identities = 59/146 (40%), Positives = 69/146 (46%), Gaps = 1/146 (0%)
Frame = +1
Query: 91 SSKKSATKVEAAAPVAAAPKSAKKAKRAAEDEVEKQVSAKKQKIAEVAAKQKKETK-LQK 267
SS ++ E PV P +KAK +E S E KK+T L+K
Sbjct: 152 SSDDDSSSDEETVPVKKQPAVLEKAK------IESSSSDDDSSSDEETVPMKKQTAVLEK 205
Query: 268 VKKESSSDDDSSSEDEKPAPKVAPLKTSVKNGTTPAKKAKPAPSSSSSDEDSSDEEEEVI 447
K ESSS DD SS DE+P TPAKK SSDE SSDEE V+
Sbjct: 206 AKAESSSSDDGSSSDEEP---------------TPAKKEPIVVKKDSSDESSSDEETPVV 250
Query: 448 AKKPTKVVVPKKEESSSDEDSSSDED 525
KKPT VV K ESSS E+ SS +D
Sbjct: 251 KKKPTTVVKDAKAESSSSEEESSSDD 276
Score = 78.2 bits (191), Expect = 6e-14
Identities = 61/157 (38%), Positives = 82/157 (51%), Gaps = 3/157 (1%)
Frame = +1
Query: 64 SPLRVKMPKSSKKS--ATKVEAAAPVAAAPKSAKKAKRAAEDEVEKQVSAKKQKIAEVAA 237
+P ++K SS++ ++ E AP P+ KKAK + + S + E A
Sbjct: 81 TPSKLKDESSSEEEDDSSSDEEIAPAKKRPEPIKKAKVESSSSDDDSTSDE-----ETAP 135
Query: 238 KQKKETKLQKVKKESSSDDDSSSEDEKPAPKVAPLKTSVKNGTTPAKKAKPAPSSSSSDE 417
+K+ L+K K ESSS DD SS DE+ P VK +KAK SSSSD+
Sbjct: 136 VKKQPAVLEKAKVESSSSDDDSSSDEETVP--------VKKQPAVLEKAKI--ESSSSDD 185
Query: 418 DSSDEEEEVIAKKPTKVV-VPKKEESSSDEDSSSDED 525
DSS +EE V KK T V+ K E SSSD+ SSSDE+
Sbjct: 186 DSSSDEETVPMKKQTAVLEKAKAESSSSDDGSSSDEE 222
Score = 67.8 bits (164), Expect = 8e-11
Identities = 49/134 (36%), Positives = 66/134 (48%), Gaps = 5/134 (3%)
Frame = +1
Query: 145 PKSAKKAKRAAEDEVEKQVSAKKQKIAEVAAKQKKETKLQKVKKESSSDDDSSSEDEKPA 324
P AKK + + + S+ ++ K+K T ++ K ESSS ++ SS D++P
Sbjct: 223 PTPAKKEPIVVKKDSSDESSSDEET---PVVKKKPTTVVKDAKAESSSSEEESSSDDEPT 279
Query: 325 PKVAPLKTSVKNGTTPAKKAKPAPSSSSSDEDSSDEEEEVIAKKPTKVVV----PKKEES 492
P P T K AKPA SSS E+ SDEEE K PTK K+ES
Sbjct: 280 PAKKP---------TVVKNAKPAAKDSSSSEEDSDEEESDDEKPPTKKAKVSSKTSKQES 330
Query: 493 SSDEDS-SSDEDSS 531
SSDE S SD++ S
Sbjct: 331 SSDESSDESDKEES 344
Score = 38.9 bits (89), Expect = 0.039
Identities = 25/73 (34%), Positives = 33/73 (44%), Gaps = 9/73 (12%)
Frame = +1
Query: 343 KTSVKNGTTPAKKAKPAPSSSSSDEDSSD---------EEEEVIAKKPTKVVVPKKEESS 495
K SV TPA KP E+ D E +V+ K+ + VPKK ESS
Sbjct: 6 KKSVTEVETPASMTKPLKKGKRDAEEDLDMQVTKKQKKELIDVVQKEKAEKTVPKKVESS 65
Query: 496 SDEDSSSDEDSSS 534
S + S SDE+ +
Sbjct: 66 SSDASDSDEEEKT 78
>ref|NP_175322.1| nucleolin, putative; protein id: At1g48920.1 [Arabidopsis thaliana]
gi|25405286|pir||A96527 probable nuM1 protein [imported]
- Arabidopsis thaliana
gi|11094815|gb|AAG29744.1|AC084414_12 nuM1 protein,
putative [Arabidopsis thaliana]
gi|28973759|gb|AAO64195.1| putative nucleolin
[Arabidopsis thaliana]
Length = 557
Score = 91.3 bits (225), Expect = 7e-18
Identities = 72/169 (42%), Positives = 88/169 (51%), Gaps = 27/169 (15%)
Frame = +1
Query: 100 KSATKVEAAAPVAAAPKSAKKAKRAAEDEVEKQVSAKKQKIAEVAAKQK-KETKLQKVKK 276
KSATKV A A K KK KR ED+++ +VS KKQK +AA QK K K K
Sbjct: 5 KSATKVVAEIK---ATKPLKKGKREPEDDIDTKVSLKKQKKDVIAAVQKEKAVKKVPKKV 61
Query: 277 ESSSDDDSSSEDEKPAPKV----------------------APLKTSVKNGTTPAKKAKP 390
ESS D DS SE+E+ A KV AP K T AKK+K
Sbjct: 62 ESSDDSDSESEEEEKAKKVPAKKAASSSDESSDDSSSDDEPAPKKAVAATNGTVAKKSK- 120
Query: 391 APSSSSSDEDSSDEEEEVIAKKPTKVV----VPKKEESSSDEDSSSDED 525
SSSSD+DSSD EE + KKP V K+ESSS++DSSS+++
Sbjct: 121 -DDSSSSDDDSSD-EEVAVTKKPAAAAKNGSVKAKKESSSEDDSSSEDE 167
Score = 74.7 bits (182), Expect = 6e-13
Identities = 67/173 (38%), Positives = 88/173 (50%), Gaps = 25/173 (14%)
Frame = +1
Query: 88 KSSKKSATKVEAAAPVAAAPKSAKKAKRAAEDEVEKQVSAKKQKIAEVAAKQKKETK--L 261
+SS S++ E A A A + AK++ +D + +++A V K K
Sbjct: 91 ESSDDSSSDDEPAPKKAVAATNGTVAKKSKDDSSSSDDDSSDEEVA-VTKKPAAAAKNGS 149
Query: 262 QKVKKESSSDDDSSSEDE---KPAPKVAPLKTSVKNGTT-------------PAKK---- 381
K KKESSS+DDSSSEDE KPA K+A K + K+ ++ PA K
Sbjct: 150 VKAKKESSSEDDSSSEDEPAKKPAAKIA--KPAAKDSSSSDDDSDEDSEDEKPATKKAAP 207
Query: 382 --AKPAPSSSSSDEDSSDE-EEEVIAKKPTKVVVPKKEESSSDEDSSSDEDSS 531
AK A SS SSDEDS +E E+E A+K KK SSSDE S S+ED S
Sbjct: 208 AAAKAASSSDSSDEDSDEESEDEKPAQKKADTKASKK--SSSDESSESEEDES 258
Score = 68.2 bits (165), Expect = 6e-11
Identities = 52/158 (32%), Positives = 76/158 (47%), Gaps = 7/158 (4%)
Frame = +1
Query: 76 VKMPKSSKKSATKVEAAAPVAAAPKSAKKAKR-------AAEDEVEKQVSAKKQKIAEVA 234
V+ K+ KK KVE++ + + +KAK+ ++ DE S+ + + A
Sbjct: 48 VQKEKAVKKVPKKVESSDDSDSESEEEEKAKKVPAKKAASSSDESSDDSSSDDEPAPKKA 107
Query: 235 AKQKKETKLQKVKKESSSDDDSSSEDEKPAPKVAPLKTSVKNGTTPAKKAKPAPSSSSSD 414
T +K K +SSS DD SS++E K + KNG+ AKK SSS+
Sbjct: 108 VAATNGTVAKKSKDDSSSSDDDSSDEEVAVTKKP--AAAAKNGSVKAKK------ESSSE 159
Query: 415 EDSSDEEEEVIAKKPTKVVVPKKEESSSDEDSSSDEDS 528
+DSS E+E AKKP + + SS D SDEDS
Sbjct: 160 DDSSSEDEP--AKKPAAKIAKPAAKDSSSSDDDSDEDS 195
Score = 61.2 bits (147), Expect = 7e-09
Identities = 47/143 (32%), Positives = 71/143 (48%), Gaps = 4/143 (2%)
Frame = +1
Query: 88 KSSKKSATKVEAAAPVAAAPKSAKK-AKRAAEDEVEKQVSAKKQKIAEVAAKQKKETKLQ 264
K+ K+S+++ ++++ A K A K AK AA+D + + E A +K
Sbjct: 151 KAKKESSSEDDSSSEDEPAKKPAAKIAKPAAKDSSSSDDDSDEDSEDEKPATKKAAPAAA 210
Query: 265 KVKKESSSDDDSS---SEDEKPAPKVAPLKTSVKNGTTPAKKAKPAPSSSSSDEDSSDEE 435
K S S D+ S SEDEKPA K A K S K+ + SS S+ED S++E
Sbjct: 211 KAASSSDSSDEDSDEESEDEKPAQKKADTKASKKSSSD---------ESSESEEDESEDE 261
Query: 436 EEVIAKKPTKVVVPKKEESSSDE 504
EE KK + V + E+SS+ +
Sbjct: 262 EETPKKKSSDVEMVDAEKSSAKQ 284
Score = 37.7 bits (86), Expect = 0.087
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Frame = +1
Query: 118 EAAAPVAAAPKSAKKAKRAAEDEVEKQVSAKKQKIAEVAAKQKKETKLQKVKK--ESSSD 291
E A AAP +AK A + + + ++ +K A++K +TK K ESS
Sbjct: 198 EKPATKKAAPAAAKAASSSDSSDEDSDEESEDEK----PAQKKADTKASKKSSSDESSES 253
Query: 292 DDSSSEDEKPAPK--------VAPLKTSVKNGTTPAKKA 384
++ SEDE+ PK V K+S K TP+ A
Sbjct: 254 EEDESEDEEETPKKKSSDVEMVDAEKSSAKQPKTPSTPA 292
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.298 0.115 0.285
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 426,129,241
Number of Sequences: 1393205
Number of extensions: 9448461
Number of successful extensions: 108562
Number of sequences better than 10.0: 6574
Number of HSP's better than 10.0 without gapping: 53089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 83629
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17885181664
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.6 bits)
