Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014392A_C01 KMC014392A_c01
(581 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_565697.1| putative malonyl-CoA:Acyl carrier protein trans... 142 2e-33
pir||T00580 probable [acyl-carrier-protein] S-malonyltransferase... 142 2e-33
emb|CAB45522.1| [acyl-carrier protein] S-malonyltransferase [Bra... 142 3e-33
gb|AAM64515.1| putative malonyl-CoA:Acyl carrier protein transac... 141 7e-33
gb|AAG43518.1|AF210698_1 malonyl-CoA:ACP transacylase [Perilla f... 138 6e-32
>ref|NP_565697.1| putative malonyl-CoA:Acyl carrier protein transacylase; protein id:
At2g30200.1, supported by cDNA: 299. [Arabidopsis
thaliana] gi|20197098|gb|AAM14913.1| putative
malonyl-CoA:Acyl carrier protein transacylase
[Arabidopsis thaliana] gi|20258830|gb|AAM13897.1|
putative malonyl-CoA:Acyl carrier protein transacylase
[Arabidopsis thaliana] gi|21689721|gb|AAM67482.1|
putative malonyl-CoA [Arabidopsis thaliana]
Length = 393
Score = 142 bits (359), Expect = 2e-33
Identities = 71/79 (89%), Positives = 72/79 (90%)
Frame = -3
Query: 579 IRTPRIPVISNVDAQPHADPDTIKKILGRQVTSPVQWETTVKTLLSKGLKKGYELGPGKV 400
IR+PRIPVISNVDAQPHADPDTIKKIL RQVTSPVQWETTVKTLLSKGLK YELGPGKV
Sbjct: 315 IRSPRIPVISNVDAQPHADPDTIKKILARQVTSPVQWETTVKTLLSKGLKSSYELGPGKV 374
Query: 399 IAGIVKRVDKSAEIENIGA 343
IAGI KRVDKSA ENI A
Sbjct: 375 IAGIFKRVDKSASFENISA 393
>pir||T00580 probable [acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39)
T27E13.6 [similarity] - Arabidopsis thaliana
Length = 367
Score = 142 bits (359), Expect = 2e-33
Identities = 71/79 (89%), Positives = 72/79 (90%)
Frame = -3
Query: 579 IRTPRIPVISNVDAQPHADPDTIKKILGRQVTSPVQWETTVKTLLSKGLKKGYELGPGKV 400
IR+PRIPVISNVDAQPHADPDTIKKIL RQVTSPVQWETTVKTLLSKGLK YELGPGKV
Sbjct: 289 IRSPRIPVISNVDAQPHADPDTIKKILARQVTSPVQWETTVKTLLSKGLKSSYELGPGKV 348
Query: 399 IAGIVKRVDKSAEIENIGA 343
IAGI KRVDKSA ENI A
Sbjct: 349 IAGIFKRVDKSASFENISA 367
>emb|CAB45522.1| [acyl-carrier protein] S-malonyltransferase [Brassica napus]
Length = 349
Score = 142 bits (358), Expect = 3e-33
Identities = 70/77 (90%), Positives = 72/77 (92%)
Frame = -3
Query: 579 IRTPRIPVISNVDAQPHADPDTIKKILGRQVTSPVQWETTVKTLLSKGLKKGYELGPGKV 400
IR+PRIPVISNVDAQPHADPDTIKKIL RQVTSPVQWETTVKTLLSKGLK YELGPGKV
Sbjct: 273 IRSPRIPVISNVDAQPHADPDTIKKILARQVTSPVQWETTVKTLLSKGLKSSYELGPGKV 332
Query: 399 IAGIVKRVDKSAEIENI 349
IAGI KRVDKSA +ENI
Sbjct: 333 IAGIFKRVDKSASVENI 349
>gb|AAM64515.1| putative malonyl-CoA:Acyl carrier protein transacylase [Arabidopsis
thaliana]
Length = 367
Score = 141 bits (355), Expect = 7e-33
Identities = 70/79 (88%), Positives = 72/79 (90%)
Frame = -3
Query: 579 IRTPRIPVISNVDAQPHADPDTIKKILGRQVTSPVQWETTVKTLLSKGLKKGYELGPGKV 400
IR+PRIPVISNVDAQPHADPDTIKKIL RQVTSPVQWETTVKTLLSKGL+ YELGPGKV
Sbjct: 289 IRSPRIPVISNVDAQPHADPDTIKKILARQVTSPVQWETTVKTLLSKGLQSSYELGPGKV 348
Query: 399 IAGIVKRVDKSAEIENIGA 343
IAGI KRVDKSA ENI A
Sbjct: 349 IAGIFKRVDKSASFENISA 367
>gb|AAG43518.1|AF210698_1 malonyl-CoA:ACP transacylase [Perilla frutescens]
Length = 376
Score = 138 bits (347), Expect = 6e-32
Identities = 68/79 (86%), Positives = 72/79 (91%)
Frame = -3
Query: 579 IRTPRIPVISNVDAQPHADPDTIKKILGRQVTSPVQWETTVKTLLSKGLKKGYELGPGKV 400
I PRIPVISNVDA+PHADP+TIKKIL RQVTSPVQWETTVKTLLS+GL K YELGPGKV
Sbjct: 298 ISKPRIPVISNVDAEPHADPETIKKILARQVTSPVQWETTVKTLLSRGLTKSYELGPGKV 357
Query: 399 IAGIVKRVDKSAEIENIGA 343
IAGIVKR+DK A IENIGA
Sbjct: 358 IAGIVKRMDKGAAIENIGA 376
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 486,470,807
Number of Sequences: 1393205
Number of extensions: 9862597
Number of successful extensions: 22901
Number of sequences better than 10.0: 237
Number of HSP's better than 10.0 without gapping: 22298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22862
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21712003912
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
