Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014384A_C01 KMC014384A_c01
(495 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_200651.1| leucine zipper-containing protein; protein id: ... 119 2e-26
pir||S21495 tomato leucine zipper-containing protein - tomato gi... 106 1e-22
dbj|BAB86177.1| putative leucine zipper protein [Oryza sativa (j... 84 7e-16
ref|NP_566477.1| Expressed protein; protein id: At3g14090.1, sup... 83 1e-15
gb|AAL07238.2| unknown protein [Arabidopsis thaliana] 83 1e-15
>ref|NP_200651.1| leucine zipper-containing protein; protein id: At5g58430.1,
supported by cDNA: gi_20453215 [Arabidopsis thaliana]
gi|10177020|dbj|BAB10258.1| leucine zipper protein
[Arabidopsis thaliana] gi|20453216|gb|AAM19847.1|
AT5g58430/mqj2_20 [Arabidopsis thaliana]
gi|23463065|gb|AAN33202.1| At5g58430/mqj2_20
[Arabidopsis thaliana]
Length = 624
Score = 119 bits (297), Expect = 2e-26
Identities = 60/109 (55%), Positives = 82/109 (75%), Gaps = 2/109 (1%)
Frame = -1
Query: 492 SSWNKMLDILKVESNESEAPNVAADLMKDKLNLFNMHFEEICRVQSTWSVIDEQLREEIR 313
SSWNKML +LKV+ N + N MK+KL FN+ F+EIC+V STW V DEQL+EE++
Sbjct: 511 SSWNKMLGLLKVD-NTAAGMNGLGKTMKEKLKQFNIQFDEICKVHSTWVVFDEQLKEELK 569
Query: 312 ISVNDILLPAYGNFIGRFQDV--LGKHAYEYIEYGLFDIEDSLNYLFVG 172
IS+ +L+PAYG+FIGRFQ++ +GK+A +YI+YG+ DIE +N LF G
Sbjct: 570 ISLARLLVPAYGSFIGRFQNLGDIGKNADKYIKYGVEDIEARINELFKG 618
>pir||S21495 tomato leucine zipper-containing protein - tomato
gi|19275|emb|CAA78112.1| protein of unknown function
[Lycopersicon esculentum] gi|445619|prf||1909366A Leu
zipper protein
Length = 631
Score = 106 bits (265), Expect = 1e-22
Identities = 51/110 (46%), Positives = 76/110 (68%), Gaps = 2/110 (1%)
Frame = -1
Query: 492 SSWNKMLDILKVESNESEAPNVAADLMKDKLNLFNMHFEEICRVQSTWSVIDEQLREEIR 313
SSW+K+ +LK+++N +P A+ +K+KL LFN +FEEIC+ QSTW + DEQL+EE+R
Sbjct: 514 SSWSKVSGVLKIDNNAMSSPTGASRSLKEKLKLFNSYFEEICKTQSTWIIFDEQLKEELR 573
Query: 312 ISVNDILLPAYGNFIGRFQ--DVLGKHAYEYIEYGLFDIEDSLNYLFVGA 169
ISV L PAY NFIGR Q + +H +I++ + D+E ++ LF G+
Sbjct: 574 ISVAGALSPAYRNFIGRLQSNNDSSRHTERHIKFSVEDLEARISELFQGS 623
>dbj|BAB86177.1| putative leucine zipper protein [Oryza sativa (japonica
cultivar-group)]
Length = 646
Score = 84.3 bits (207), Expect = 7e-16
Identities = 42/114 (36%), Positives = 74/114 (64%), Gaps = 4/114 (3%)
Frame = -1
Query: 492 SSWNKMLDILKVESNESEAPNVAA--DLMKDKLNLFNMHFEEICRVQSTWSVIDEQLREE 319
SSW ++L L+ + + +A +K++ FN+ FEE+ + Q+TW V+D QLREE
Sbjct: 531 SSWTRVLACLRDDGLPQTMGSSSALKASLKERFKNFNLAFEELYKTQTTWKVVDPQLREE 590
Query: 318 IRISVNDILLPAYGNFIGRFQDVL--GKHAYEYIEYGLFDIEDSLNYLFVGAKP 163
++IS+++ +LPAY +F+GRF+ L G+++ YI+Y D+E+ ++ F G +P
Sbjct: 591 LKISISEKVLPAYRSFVGRFRGQLEGGRNSARYIKYNPEDLENQVSDFFEGRRP 644
>ref|NP_566477.1| Expressed protein; protein id: At3g14090.1, supported by cDNA:
gi_15810240 [Arabidopsis thaliana]
Length = 451
Score = 83.2 bits (204), Expect = 1e-15
Identities = 44/112 (39%), Positives = 72/112 (64%), Gaps = 5/112 (4%)
Frame = -1
Query: 492 SSWNKMLDILKVES---NESEAPNVAADLMKDKLNLFNMHFEEICRVQSTWSVIDEQLRE 322
++W ++L+ L+ E + S + V+ ++++ FN FEE+ R QSTWSV D QLRE
Sbjct: 330 ATWVRVLNSLRDEGLHVSGSFSSGVSRSALRERFKAFNTMFEEVHRTQSTWSVPDAQLRE 389
Query: 321 EIRISVNDILLPAYGNFIGRFQDVL--GKHAYEYIEYGLFDIEDSLNYLFVG 172
E+RIS+++ L+PAY +F+GRF+ + G+H Y++Y + DIE + F G
Sbjct: 390 ELRISLSEHLIPAYRSFLGRFRGHIESGRHPENYLKYSVEDIETIVLDFFEG 441
>gb|AAL07238.2| unknown protein [Arabidopsis thaliana]
Length = 503
Score = 83.2 bits (204), Expect = 1e-15
Identities = 44/112 (39%), Positives = 72/112 (64%), Gaps = 5/112 (4%)
Frame = -1
Query: 492 SSWNKMLDILKVES---NESEAPNVAADLMKDKLNLFNMHFEEICRVQSTWSVIDEQLRE 322
++W ++L+ L+ E + S + V+ ++++ FN FEE+ R QSTWSV D QLRE
Sbjct: 382 ATWVRVLNSLRDEGLHVSGSFSSGVSRSALRERFKAFNTMFEEVHRTQSTWSVPDAQLRE 441
Query: 321 EIRISVNDILLPAYGNFIGRFQDVL--GKHAYEYIEYGLFDIEDSLNYLFVG 172
E+RIS+++ L+PAY +F+GRF+ + G+H Y++Y + DIE + F G
Sbjct: 442 ELRISLSEHLIPAYRSFLGRFRGHIESGRHPENYLKYSVEDIETIVLDFFEG 493
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 387,610,157
Number of Sequences: 1393205
Number of extensions: 7751797
Number of successful extensions: 18316
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 17902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18260
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14493193850
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
