Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014308A_C01 KMC014308A_c01
(654 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK96841.1| G protein-coupled receptor-like protein [Arabidop... 224 1e-57
ref|NP_201331.1| G protein-coupled receptor-like protein; protei... 224 1e-57
gb|AAF75794.1|AF272710_1 putative 7-transmembrane G-protein-coup... 223 2e-57
ref|NP_175700.1| putative G protein-coupled receptor; protein id... 159 4e-38
pir||B84593 hypothetical protein At2g20770 [imported] - Arabidop... 153 2e-36
>gb|AAK96841.1| G protein-coupled receptor-like protein [Arabidopsis thaliana]
gi|22136114|gb|AAM91135.1| G protein-coupled
receptor-like protein [Arabidopsis thaliana]
Length = 433
Score = 224 bits (570), Expect = 1e-57
Identities = 108/158 (68%), Positives = 129/158 (81%)
Frame = -2
Query: 653 LMSKRFPHSGNYPSSEGNPRDKLVQWSHGATGMAITLCKAAQVFPSDRELRDAAIEAGEV 474
+MS RFP+SGNYP SEGNPRDKLVQW+HGATGMAITL KA+QVFP +R+ R+AAIEAGEV
Sbjct: 280 MMSNRFPNSGNYPCSEGNPRDKLVQWAHGATGMAITLAKASQVFPKERDFREAAIEAGEV 339
Query: 473 VWKSGLVKKVGLADGVSGNAYAFLSLYRLTKESIYEERARSFSSFLYDNVTALQGAADEG 294
VWKSGLVKKVGLADGV+GNAYAFLSLYRLT + +YEERA++F+S+L + L +
Sbjct: 340 VWKSGLVKKVGLADGVAGNAYAFLSLYRLTGDVVYEERAKAFASYLCRDAIELVNMTSQE 399
Query: 293 QEPGGGNGYSLFHGLAGTACLWFDLLEPNNSRFPGYEL 180
E + YSLF GLAG CLWFDL+ P +S+FPGYE+
Sbjct: 400 TE----HDYSLFRGLAGPVCLWFDLVSPVDSKFPGYEI 433
>ref|NP_201331.1| G protein-coupled receptor-like protein; protein id: At5g65280.1,
supported by cDNA: gi_15451139, supported by cDNA:
gi_16604355 [Arabidopsis thaliana]
gi|10178190|dbj|BAB11664.1| G protein-coupled
receptor-like protein [Arabidopsis thaliana]
gi|16604356|gb|AAL24184.1| AT5g65280/MQN23_23
[Arabidopsis thaliana]
Length = 433
Score = 224 bits (570), Expect = 1e-57
Identities = 108/158 (68%), Positives = 129/158 (81%)
Frame = -2
Query: 653 LMSKRFPHSGNYPSSEGNPRDKLVQWSHGATGMAITLCKAAQVFPSDRELRDAAIEAGEV 474
+MS RFP+SGNYP SEGNPRDKLVQW+HGATGMAITL KA+QVFP +R+ R+AAIEAGEV
Sbjct: 280 MMSNRFPNSGNYPCSEGNPRDKLVQWAHGATGMAITLAKASQVFPKERDFREAAIEAGEV 339
Query: 473 VWKSGLVKKVGLADGVSGNAYAFLSLYRLTKESIYEERARSFSSFLYDNVTALQGAADEG 294
VWKSGLVKKVGLADGV+GNAYAFLSLYRLT + +YEERA++F+S+L + L +
Sbjct: 340 VWKSGLVKKVGLADGVAGNAYAFLSLYRLTGDVVYEERAKAFASYLCRDAIELVNMTSQE 399
Query: 293 QEPGGGNGYSLFHGLAGTACLWFDLLEPNNSRFPGYEL 180
E + YSLF GLAG CLWFDL+ P +S+FPGYE+
Sbjct: 400 TE----HDYSLFRGLAGPVCLWFDLVSPVDSKFPGYEI 433
>gb|AAF75794.1|AF272710_1 putative 7-transmembrane G-protein-coupled receptor [Solanum
chacoense]
Length = 424
Score = 223 bits (568), Expect = 2e-57
Identities = 109/158 (68%), Positives = 122/158 (76%)
Frame = -2
Query: 653 LMSKRFPHSGNYPSSEGNPRDKLVQWSHGATGMAITLCKAAQVFPSDRELRDAAIEAGEV 474
+MS RFPHSGNYP SEGNPRDKLVQWSHGATG+ IT+CK ++V DRE R AAIE GEV
Sbjct: 270 MMSNRFPHSGNYPVSEGNPRDKLVQWSHGATGITITMCKVSEVLSDDREFRGAAIEGGEV 329
Query: 473 VWKSGLVKKVGLADGVSGNAYAFLSLYRLTKESIYEERARSFSSFLYDNVTALQGAADEG 294
VWKSGLV++VGLADG SGNAYAFLSLYRLT ESIYEERA++F+S LY N + +E
Sbjct: 330 VWKSGLVERVGLADGASGNAYAFLSLYRLTGESIYEERAKAFASCLYQNARTIM---NER 386
Query: 293 QEPGGGNGYSLFHGLAGTACLWFDLLEPNNSRFPGYEL 180
+ YSLF GL G AC FDLL P NSRFPGYEL
Sbjct: 387 HHNEADHSYSLFQGLGGVACFLFDLLAPKNSRFPGYEL 424
>ref|NP_175700.1| putative G protein-coupled receptor; protein id: At1g52920.1
[Arabidopsis thaliana] gi|25405614|pir||E96570
hypothetical protein F14G24.19 [imported] - Arabidopsis
thaliana gi|12324628|gb|AAG52264.1|AC019018_1 putative G
protein-coupled receptor; 80093-78432 [Arabidopsis
thaliana]
Length = 401
Score = 159 bits (401), Expect = 4e-38
Identities = 83/158 (52%), Positives = 108/158 (67%)
Frame = -2
Query: 653 LMSKRFPHSGNYPSSEGNPRDKLVQWSHGATGMAITLCKAAQVFPSDRELRDAAIEAGEV 474
++ RFP SGNY SSEG+ D+LV W HGA G+A+TL KAAQV+ + +E +AA+EAGEV
Sbjct: 249 MIQNRFP-SGNYLSSEGSKSDRLVHWCHGAPGVALTLVKAAQVY-NTKEFVEAAMEAGEV 306
Query: 473 VWKSGLVKKVGLADGVSGNAYAFLSLYRLTKESIYEERARSFSSFLYDNVTALQGAADEG 294
VW GL+K+VG+ G+SGN Y FLSLYRLT+ Y RA++F+SFL D L EG
Sbjct: 307 VWSRGLLKRVGICHGISGNTYVFLSLYRLTRNPKYLYRAKAFASFLLDKSEKL---ISEG 363
Query: 293 QEPGGGNGYSLFHGLAGTACLWFDLLEPNNSRFPGYEL 180
Q GG +SLF G+ G A + D+ +P + FPGYEL
Sbjct: 364 QMHGGDRPFSLFEGIGGMAYMLLDMNDPTQALFPGYEL 401
>pir||B84593 hypothetical protein At2g20770 [imported] - Arabidopsis thaliana
gi|4454471|gb|AAD20918.1| hypothetical protein
[Arabidopsis thaliana]
Length = 371
Score = 153 bits (387), Expect = 2e-36
Identities = 82/159 (51%), Positives = 111/159 (69%), Gaps = 1/159 (0%)
Frame = -2
Query: 653 LMSKRFPHSGNYPSSEGNPR-DKLVQWSHGATGMAITLCKAAQVFPSDRELRDAAIEAGE 477
++ RFP SGNYP+SE + + D LV W HGA G+A+TL KAA+VF +RE +A+ A E
Sbjct: 218 MIKNRFP-SGNYPASEEDKKKDILVHWCHGAPGIALTLGKAAEVF-GEREFLEASAAAAE 275
Query: 476 VVWKSGLVKKVGLADGVSGNAYAFLSLYRLTKESIYEERARSFSSFLYDNVTALQGAADE 297
VVW GL+K+VG+ G+SGNAY FL+LYR T S Y RA++F+SFL D L +
Sbjct: 276 VVWNRGLLKRVGICHGISGNAYVFLALYRATGRSEYLYRAKAFASFLLDRGPKL---LSK 332
Query: 296 GQEPGGGNGYSLFHGLAGTACLWFDLLEPNNSRFPGYEL 180
G+ GG + YSLF G+AG A L+ D+++P+ +RFPGYEL
Sbjct: 333 GEMHGGDSPYSLFEGVAGMAYLFLDMVDPSEARFPGYEL 371
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 569,837,968
Number of Sequences: 1393205
Number of extensions: 12381776
Number of successful extensions: 41188
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 38693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41068
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 28144814643
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
