Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014246A_C01 KMC014246A_c01
(673 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_176659.1| hypothetical protein; protein id: At1g64790.1 [... 250 e-101
pir||B96671 similar to translational activator [imported] - Arab... 250 2e-96
gb|EAA00880.1| ebiP8519 [Anopheles gambiae str. PEST] 178 5e-59
gb|AAM47299.1|AF377946_1 unknown protein [Oryza sativa (japonica... 222 1e-58
gb|AAF45332.1| CG17514 gene product [Drosophila melanogaster] 173 8e-58
>ref|NP_176659.1| hypothetical protein; protein id: At1g64790.1 [Arabidopsis thaliana]
Length = 2428
Score = 250 bits (639), Expect(2) = e-101
Identities = 130/145 (89%), Positives = 139/145 (95%)
Frame = +3
Query: 237 SWRIRQSSVELLGDLLFKVAGTSGKALLEGGSDDEGSSTEAHGRAIIEVLGYSKRNEVLA 416
+WRIRQSSVELLGDLLFKVAGTSGKALLEGGSDDEG+STEA GRAII++LG KRNEVLA
Sbjct: 1588 NWRIRQSSVELLGDLLFKVAGTSGKALLEGGSDDEGASTEAQGRAIIDILGMDKRNEVLA 1647
Query: 417 ALYMVRTDVSLSVRQAALRVWKTIVANTPQTLREIMPVLMDTLIASLASSSSERRQVAGR 596
ALYMVRTDVSLSVRQAAL VWKTIVANTP+TL+EIMP+LM TLI+SLAS SSERRQVAGR
Sbjct: 1648 ALYMVRTDVSLSVRQAALHVWKTIVANTPKTLKEIMPILMSTLISSLASPSSERRQVAGR 1707
Query: 597 SLGELVRKLGERVLPLIIPILSRGL 671
SLGELVRKLGERVLPLIIPILS+GL
Sbjct: 1708 SLGELVRKLGERVLPLIIPILSKGL 1732
Score = 140 bits (352), Expect(2) = e-101
Identities = 70/78 (89%), Positives = 71/78 (90%)
Frame = +2
Query: 2 ASVRDGYLTLFKFLPRSLGVQFQNYLSQVLPAILDGLADENESVRDAALGAGHVLVEHYA 181
ASVRDGYLTLFKFLPRSLG QFQ YL VLPAILDGLADENESVRDAALGAGHVLVEH+A
Sbjct: 1510 ASVRDGYLTLFKFLPRSLGAQFQKYLQLVLPAILDGLADENESVRDAALGAGHVLVEHHA 1569
Query: 182 ATSLPLLLPVVEDGILND 235
TSLPLLLP VEDGI ND
Sbjct: 1570 TTSLPLLLPAVEDGIFND 1587
Score = 45.1 bits (105), Expect(2) = 4e-07
Identities = 31/87 (35%), Positives = 49/87 (55%)
Frame = +2
Query: 2 ASVRDGYLTLFKFLPRSLGVQFQNYLSQVLPAILDGLADENESVRDAALGAGHVLVEHYA 181
A R+G L F+ L LG F+ Y+ ++LP +L +D+ +VR+AA A ++ +
Sbjct: 1193 AKRREGALLAFECLCEKLGKLFEPYVIKMLPLLLVSFSDQVGAVREAAECAARAMMSQLS 1252
Query: 182 ATSLPLLLPVVEDGILNDKLAYSTKLS 262
A + L+LP + G L DK A+ TK S
Sbjct: 1253 AYGVKLVLPSLLKG-LEDK-AWRTKQS 1277
Score = 30.8 bits (68), Expect(2) = 4e-07
Identities = 39/192 (20%), Positives = 70/192 (36%), Gaps = 51/192 (26%)
Frame = +3
Query: 237 SWRIRQSSVELLGDLLFKVAGTSGKAL------LEGGSDDEGSSTEAHGRAIIEVLGYSK 398
+WR +QSSV+LLG + F + L L D ++ G+ ++ +G
Sbjct: 1271 AWRTKQSSVQLLGAMAFCAPQQLSQCLPRVVPKLTEVLTDTHPKVQSAGQLALQQVGSVI 1330
Query: 399 RN----EVLAALYMVRTDVSLSVRQAALRVWKTIVANT---------------------- 500
+N ++ L + TD + R A + +T N+
Sbjct: 1331 KNPEISSLVPTLLLALTDPNEYTRHALDTLLQTTFVNSVDAPSLALLVPIVHRGLRERSS 1390
Query: 501 -------------------PQTLREIMPVLMDTLIASLASSSSERRQVAGRSLGELVRKL 623
P+ + + +L+ + L E R VA R++G L+R +
Sbjct: 1391 ETKKKASQIVGNMCSLVTEPKDMIPYIGLLLPEVKKVLVDPIPEVRSVAARAVGSLIRGM 1450
Query: 624 GERVLPLIIPIL 659
GE P ++P L
Sbjct: 1451 GEDNFPDLVPWL 1462
>pir||B96671 similar to translational activator [imported] - Arabidopsis thaliana
gi|5042415|gb|AAD38254.1|AC006193_10 similar to
translational activator [Arabidopsis thaliana]
Length = 2698
Score = 250 bits (639), Expect(2) = 2e-96
Identities = 130/145 (89%), Positives = 139/145 (95%)
Frame = +3
Query: 237 SWRIRQSSVELLGDLLFKVAGTSGKALLEGGSDDEGSSTEAHGRAIIEVLGYSKRNEVLA 416
+WRIRQSSVELLGDLLFKVAGTSGKALLEGGSDDEG+STEA GRAII++LG KRNEVLA
Sbjct: 1858 NWRIRQSSVELLGDLLFKVAGTSGKALLEGGSDDEGASTEAQGRAIIDILGMDKRNEVLA 1917
Query: 417 ALYMVRTDVSLSVRQAALRVWKTIVANTPQTLREIMPVLMDTLIASLASSSSERRQVAGR 596
ALYMVRTDVSLSVRQAAL VWKTIVANTP+TL+EIMP+LM TLI+SLAS SSERRQVAGR
Sbjct: 1918 ALYMVRTDVSLSVRQAALHVWKTIVANTPKTLKEIMPILMSTLISSLASPSSERRQVAGR 1977
Query: 597 SLGELVRKLGERVLPLIIPILSRGL 671
SLGELVRKLGERVLPLIIPILS+GL
Sbjct: 1978 SLGELVRKLGERVLPLIIPILSKGL 2002
Score = 124 bits (312), Expect(2) = 2e-96
Identities = 70/107 (65%), Positives = 71/107 (65%), Gaps = 29/107 (27%)
Frame = +2
Query: 2 ASVRDGYLTLFKFLPRSLGVQFQNYLSQVLPAILDG------------------------ 109
ASVRDGYLTLFKFLPRSLG QFQ YL VLPAILDG
Sbjct: 1751 ASVRDGYLTLFKFLPRSLGAQFQKYLQLVLPAILDGEPIFFGRLLTSELPFDSLTKLVVL 1810
Query: 110 -----LADENESVRDAALGAGHVLVEHYAATSLPLLLPVVEDGILND 235
LADENESVRDAALGAGHVLVEH+A TSLPLLLP VEDGI ND
Sbjct: 1811 YDVLGLADENESVRDAALGAGHVLVEHHATTSLPLLLPAVEDGIFND 1857
Score = 45.1 bits (105), Expect(2) = 4e-07
Identities = 31/87 (35%), Positives = 49/87 (55%)
Frame = +2
Query: 2 ASVRDGYLTLFKFLPRSLGVQFQNYLSQVLPAILDGLADENESVRDAALGAGHVLVEHYA 181
A R+G L F+ L LG F+ Y+ ++LP +L +D+ +VR+AA A ++ +
Sbjct: 1434 AKRREGALLAFECLCEKLGKLFEPYVIKMLPLLLVSFSDQVGAVREAAECAARAMMSQLS 1493
Query: 182 ATSLPLLLPVVEDGILNDKLAYSTKLS 262
A + L+LP + G L DK A+ TK S
Sbjct: 1494 AYGVKLVLPSLLKG-LEDK-AWRTKQS 1518
Score = 30.8 bits (68), Expect(2) = 4e-07
Identities = 39/192 (20%), Positives = 70/192 (36%), Gaps = 51/192 (26%)
Frame = +3
Query: 237 SWRIRQSSVELLGDLLFKVAGTSGKAL------LEGGSDDEGSSTEAHGRAIIEVLGYSK 398
+WR +QSSV+LLG + F + L L D ++ G+ ++ +G
Sbjct: 1512 AWRTKQSSVQLLGAMAFCAPQQLSQCLPRVVPKLTEVLTDTHPKVQSAGQLALQQVGSVI 1571
Query: 399 RN----EVLAALYMVRTDVSLSVRQAALRVWKTIVANT---------------------- 500
+N ++ L + TD + R A + +T N+
Sbjct: 1572 KNPEISSLVPTLLLALTDPNEYTRHALDTLLQTTFVNSVDAPSLALLVPIVHRGLRERSS 1631
Query: 501 -------------------PQTLREIMPVLMDTLIASLASSSSERRQVAGRSLGELVRKL 623
P+ + + +L+ + L E R VA R++G L+R +
Sbjct: 1632 ETKKKASQIVGNMCSLVTEPKDMIPYIGLLLPEVKKVLVDPIPEVRSVAARAVGSLIRGM 1691
Query: 624 GERVLPLIIPIL 659
GE P ++P L
Sbjct: 1692 GEDNFPDLVPWL 1703
>gb|EAA00880.1| ebiP8519 [Anopheles gambiae str. PEST]
Length = 2384
Score = 178 bits (451), Expect(2) = 5e-59
Identities = 91/145 (62%), Positives = 111/145 (75%)
Frame = +3
Query: 237 SWRIRQSSVELLGDLLFKVAGTSGKALLEGGSDDEGSSTEAHGRAIIEVLGYSKRNEVLA 416
+WRIR SSV+LLGDLL+K++G SGK + S+D+ TE +AII LG +RN VLA
Sbjct: 1537 NWRIRYSSVQLLGDLLYKISGVSGKMTTQTASEDDNFGTEQSHKAIIRSLGADRRNRVLA 1596
Query: 417 ALYMVRTDVSLSVRQAALRVWKTIVANTPQTLREIMPVLMDTLIASLASSSSERRQVAGR 596
LYM R+DVSL VRQAAL VWK +V NTP+TLREI+P L L+ LAS+S ++RQVA R
Sbjct: 1597 GLYMGRSDVSLMVRQAALHVWKVVVTNTPRTLREILPTLFSLLLGCLASTSYDKRQVAAR 1656
Query: 597 SLGELVRKLGERVLPLIIPILSRGL 671
+LG+LVRKLGERVLP IIPIL RGL
Sbjct: 1657 TLGDLVRKLGERVLPEIIPILERGL 1681
Score = 72.0 bits (175), Expect(2) = 5e-59
Identities = 36/84 (42%), Positives = 55/84 (64%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 VRDGYLTLFKFLPRSLGVQFQNYLSQVLPAILDGLADENESVRDAALGAGHVLVEHYAAT 187
V+DGY+ +F ++P + F Y+ Q++ IL LADENE VRD AL AG +V YA +
Sbjct: 1461 VKDGYIMMFIYMPSAFPNDFTPYIGQIINPILKALADENEYVRDTALKAGQRIVNLYAES 1520
Query: 188 SLPLLLPVVEDGILND--KLAYST 253
++ LLLP +E G+ +D ++ YS+
Sbjct: 1521 AITLLLPELEKGLFDDNWRIRYSS 1544
Score = 37.7 bits (86), Expect(2) = 6e-06
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +2
Query: 11 RDGYLTLFKFLPRSLGVQFQNYLSQVLPAILDGLADENESVRDAALGAGHVLVEHYAATS 190
R+G L F+ L +LG F+ Y+ VLP +L D + VR AA ++ +A
Sbjct: 1144 REGALFAFEMLCSTLGRLFEPYIVHVLPHLLQCFGDSSVYVRQAADECAKTVMAKLSAHG 1203
Query: 191 LPLLLPVVEDGILND 235
+ L+LP + + + D
Sbjct: 1204 VKLVLPSLLNALDED 1218
Score = 33.9 bits (76), Expect(2) = 6e-06
Identities = 44/195 (22%), Positives = 74/195 (37%), Gaps = 50/195 (25%)
Frame = +3
Query: 237 SWRIRQSSVELLGDLLF------------------KVAGTSGKALLEGGS---------- 332
SWR + +SVELLG + F +V G S + E G+
Sbjct: 1219 SWRTKTASVELLGSMAFCAPKQLSSCLPSIVPKLMEVLGDSHIKVQEAGANALRVIGSVI 1278
Query: 333 ----------------DDEGSSTEAHGRAIIEV-----LGYSKRNEVLAALYMVRTDVSL 449
+D S T A ++++E + ++ + D S
Sbjct: 1279 KNPEIQAIVPVLLTALEDPSSKTSACLQSLLETKFVHFIDAPSLALIMPVVQRAFMDRST 1338
Query: 450 SVRQAALRVWKTIVANTPQ-TLREIMPVLMDTLIASLASSSSERRQVAGRSLGELVRKLG 626
R+ A ++ + + T Q L +P ++ L SL E R V+ R+LG +VR +G
Sbjct: 1339 ETRKMAAQIIGNMYSLTDQKDLTPYLPNIIPGLKTSLLDPVPEVRGVSARALGAMVRGMG 1398
Query: 627 ERVLPLIIPILSRGL 671
E ++P L + L
Sbjct: 1399 ESSFEDLLPWLMQTL 1413
>gb|AAM47299.1|AF377946_1 unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 556
Score = 222 bits (566), Expect(2) = 1e-58
Identities = 115/130 (88%), Positives = 126/130 (96%)
Frame = +3
Query: 282 LFKVAGTSGKALLEGGSDDEGSSTEAHGRAIIEVLGYSKRNEVLAALYMVRTDVSLSVRQ 461
LF+VAGTSGKA+LEGGSDDEG+STEAHGRAII+VLG KRNEVLAA+YMVR+DVSL+VRQ
Sbjct: 232 LFRVAGTSGKAILEGGSDDEGASTEAHGRAIIDVLGREKRNEVLAAIYMVRSDVSLTVRQ 291
Query: 462 AALRVWKTIVANTPQTLREIMPVLMDTLIASLASSSSERRQVAGRSLGELVRKLGERVLP 641
AAL VWKTIVANTP+TL+EIMPVLMDTLI+SLASSSSERRQVAGRSLGELVRKLGERVLP
Sbjct: 292 AALHVWKTIVANTPRTLKEIMPVLMDTLISSLASSSSERRQVAGRSLGELVRKLGERVLP 351
Query: 642 LIIPILSRGL 671
IIPILS+GL
Sbjct: 352 SIIPILSQGL 361
Score = 26.6 bits (57), Expect(2) = 1e-58
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 68 QNYLSQVLPAILDGLADENESVRDAALGAGHVLVEHYAATS 190
++Y Q+LP I+ + + SVRD GH+ + A TS
Sbjct: 204 KDYFDQILPDIIRNCSHQKASVRD-----GHLTLFRVAGTS 239
>gb|AAF45332.1| CG17514 gene product [Drosophila melanogaster]
Length = 2225
Score = 173 bits (438), Expect(2) = 8e-58
Identities = 89/145 (61%), Positives = 109/145 (74%)
Frame = +3
Query: 237 SWRIRQSSVELLGDLLFKVAGTSGKALLEGGSDDEGSSTEAHGRAIIEVLGYSKRNEVLA 416
+WRIR SSV+LLGDLL++++G SGK E S+D+ TE AII LG +RN VL+
Sbjct: 1381 NWRIRYSSVQLLGDLLYRISGVSGKMTTETASEDDNFGTEHSHTAIIHFLGDERRNRVLS 1440
Query: 417 ALYMVRTDVSLSVRQAALRVWKTIVANTPQTLREIMPVLMDTLIASLASSSSERRQVAGR 596
LYM R+DVSL VRQAAL VWK +V NTP+TLREI+P L L+ LAS+S ++RQVA R
Sbjct: 1441 GLYMGRSDVSLMVRQAALHVWKVVVTNTPRTLREILPTLFGLLLGCLASTSYDKRQVAAR 1500
Query: 597 SLGELVRKLGERVLPLIIPILSRGL 671
+LG+LVRKLGERVLP IIPIL GL
Sbjct: 1501 TLGDLVRKLGERVLPEIIPILENGL 1525
Score = 73.2 bits (178), Expect(2) = 8e-58
Identities = 37/86 (43%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 ASVRDGYLTLFKFLPRSLGVQFQNYLSQVLPAILDGLADENESVRDAALGAGHVLVEHYA 181
A V+DGY+ +F ++P + +F Y+ Q++ IL LADE+E VRD AL AG +V YA
Sbjct: 1303 AHVKDGYIMMFIYMPGAFQEEFTPYIGQIINPILKALADESEFVRDTALKAGQRIVNLYA 1362
Query: 182 ATSLPLLLPVVEDGILND--KLAYST 253
T++ LLLP +E G+ +D ++ YS+
Sbjct: 1363 ETAVALLLPELEKGLFDDNWRIRYSS 1388
Score = 41.2 bits (95), Expect(2) = 3e-07
Identities = 24/75 (32%), Positives = 40/75 (53%)
Frame = +2
Query: 11 RDGYLTLFKFLPRSLGVQFQNYLSQVLPAILDGLADENESVRDAALGAGHVLVEHYAATS 190
R+G L F+ L +LG F+ Y+ VLP +L D ++ VR AA V++ +A
Sbjct: 988 REGALFAFEVLCSTLGRLFEPYIVHVLPHLLQCFGDPSQYVRQAADDTAKVVMRKLSAHG 1047
Query: 191 LPLLLPVVEDGILND 235
+ L+LP + + + D
Sbjct: 1048 VKLVLPSLLEALDED 1062
Score = 35.0 bits (79), Expect(2) = 3e-07
Identities = 44/195 (22%), Positives = 73/195 (36%), Gaps = 50/195 (25%)
Frame = +3
Query: 237 SWRIRQSSVELLGDLLF--------------------------KVAGTSGKALLEGGSDD 338
SWR + +SVELLG + F KV + G+AL GS
Sbjct: 1063 SWRTKTASVELLGAMAFCAPKQLSSCLPSIVPKLIQVLGDSHTKVQESGGEALKVIGSVI 1122
Query: 339 EGSSTEAHGRAIIEVLGYSKRNEVLAALYMVRT-----------------------DVSL 449
+ +A +++ L N +++T D S
Sbjct: 1123 KNPEIQAIVPVLLDALEDPSNNTSTCLQSLLKTKFIHFIDAPSLALIMPVVQRAFMDRST 1182
Query: 450 SVRQAALRVWKTIVANTPQ-TLREIMPVLMDTLIASLASSSSERRQVAGRSLGELVRKLG 626
R+ A ++ + + T Q L +P ++ L +SL E R V+ R+LG +V+ +G
Sbjct: 1183 ETRKMAAQIIGNMYSLTDQKDLAPYLPSIIPGLKSSLLDPVPEVRAVSARALGAMVKGMG 1242
Query: 627 ERVLPLIIPILSRGL 671
E ++P L L
Sbjct: 1243 ESSFENLLPWLMETL 1257
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 597,954,135
Number of Sequences: 1393205
Number of extensions: 13126990
Number of successful extensions: 60619
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 56434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60325
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 29421376608
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
