Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014100A_C01 KMC014100A_c01
(606 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_181196.1| leucine-rich repeat transmembrane protein kinas... 142 3e-33
ref|NP_200638.1| leucine-rich repeat transmembrane protein kinas... 92 4e-18
ref|NP_196135.1| leucine-rich repeat transmembrane protein kinas... 89 4e-17
ref|NP_200144.1| leucine-rich repeat transmembrane protein kinas... 88 8e-17
dbj|BAA94519.1| unnamed protein product [Oryza sativa (japonica ... 88 8e-17
>ref|NP_181196.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At2g36570.1 [Arabidopsis thaliana]
gi|25408487|pir||B84782 probable receptor-like protein
kinase [imported] - Arabidopsis thaliana
gi|4581155|gb|AAD24639.1| putative receptor-like protein
kinase [Arabidopsis thaliana]
Length = 672
Score = 142 bits (358), Expect = 3e-33
Identities = 68/85 (80%), Positives = 79/85 (92%)
Frame = -1
Query: 606 VRSLVKEEWTAEVFDQELLRYQNIEEELVSMLQVGLACVVPLPEKRPTMAEVVKMVEDIR 427
VRS+VKEEWTAEVFD ELLRY+NIEEE+V+ML +GLACVVP PEKRPTMAEVVKMVE+IR
Sbjct: 587 VRSVVKEEWTAEVFDPELLRYKNIEEEMVAMLHIGLACVVPQPEKRPTMAEVVKMVEEIR 646
Query: 426 VEPSPLGEDYDESRNSLSPSVPTPE 352
VE SP+GED+DESRNS+SPS+ T +
Sbjct: 647 VEQSPVGEDFDESRNSMSPSLATTD 671
>ref|NP_200638.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At5g58300.1, supported by cDNA: gi_18086390
[Arabidopsis thaliana] gi|8777331|dbj|BAA96921.1|
receptor-like protein kinase [Arabidopsis thaliana]
gi|18086391|gb|AAL57654.1| unknown protein [Arabidopsis
thaliana] gi|24797034|gb|AAN64529.1| At5g58299/At5g58299
[Arabidopsis thaliana]
Length = 654
Score = 92.4 bits (228), Expect = 4e-18
Identities = 44/80 (55%), Positives = 62/80 (77%), Gaps = 4/80 (5%)
Frame = -1
Query: 606 VRSLVKEEWTAEVFDQELLRYQNIEEELVSMLQVGLACVVPLPEKRPTMAEVVKMVEDIR 427
V+S+V+EEWT+EVFD EL+R+QNIEEE+V MLQ+ +ACV +PE RPTM +VV+M+E+IR
Sbjct: 571 VQSVVREEWTSEVFDIELMRFQNIEEEMVQMLQIAMACVAQVPEVRPTMDDVVRMIEEIR 630
Query: 426 VEPS----PLGEDYDESRNS 379
V S P +D + ++S
Sbjct: 631 VSDSETTRPSSDDNSKPKDS 650
>ref|NP_196135.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At5g05160.1 [Arabidopsis thaliana]
gi|9759257|dbj|BAB09692.1| receptor-like protein kinase
[Arabidopsis thaliana]
Length = 640
Score = 89.0 bits (219), Expect = 4e-17
Identities = 41/60 (68%), Positives = 50/60 (83%)
Frame = -1
Query: 606 VRSLVKEEWTAEVFDQELLRYQNIEEELVSMLQVGLACVVPLPEKRPTMAEVVKMVEDIR 427
VRS+V+EEWTAEVFD ELL++QNIEEE+V MLQ+ LACV PE RP M EV +M+ED+R
Sbjct: 558 VRSVVREEWTAEVFDVELLKFQNIEEEMVQMLQLALACVARNPESRPKMEEVARMIEDVR 617
>ref|NP_200144.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At5g53320.1 [Arabidopsis thaliana]
gi|9759179|dbj|BAB09794.1| receptor protein kinase-like
protein [Arabidopsis thaliana]
Length = 601
Score = 88.2 bits (217), Expect = 8e-17
Identities = 44/82 (53%), Positives = 56/82 (67%)
Frame = -1
Query: 606 VRSLVKEEWTAEVFDQELLRYQNIEEELVSMLQVGLACVVPLPEKRPTMAEVVKMVEDIR 427
V S+V+EEWT EVFD+ELLR +EEE+V MLQVG+ C LPEKRP M EVV+MVE+IR
Sbjct: 511 VNSVVREEWTGEVFDEELLRCTQVEEEMVEMLQVGMVCTARLPEKRPNMIEVVRMVEEIR 570
Query: 426 VEPSPLGEDYDESRNSLSPSVP 361
P L Y ++ + + P
Sbjct: 571 --PEKLASGYRSEVSTGATTTP 590
>dbj|BAA94519.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
gi|9711799|dbj|BAB07903.1| putative receptor kinase
[Oryza sativa (japonica cultivar-group)]
Length = 641
Score = 88.2 bits (217), Expect = 8e-17
Identities = 39/60 (65%), Positives = 52/60 (86%)
Frame = -1
Query: 606 VRSLVKEEWTAEVFDQELLRYQNIEEELVSMLQVGLACVVPLPEKRPTMAEVVKMVEDIR 427
V+S+V+EEWTAEVFD EL+RY NIEEE+V MLQ+ +ACV PE+RP M++VV+M+ED+R
Sbjct: 552 VQSVVREEWTAEVFDVELMRYPNIEEEMVEMLQIAMACVSRTPERRPKMSDVVRMLEDVR 611
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 504,920,177
Number of Sequences: 1393205
Number of extensions: 11474481
Number of successful extensions: 74912
Number of sequences better than 10.0: 729
Number of HSP's better than 10.0 without gapping: 47390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66890
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23997478008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
