Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014064A_C01 KMC014064A_c01
(573 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM14098.1| unknown protein [Arabidopsis thaliana] gi|2168981... 62 4e-09
gb|EAA32997.1| hypothetical protein [Neurospora crassa] 49 3e-05
ref|NP_593143.1| hypothetical protein [Schizosaccharomyces pombe... 47 2e-04
gb|EAA12521.1| agCP11310 [Anopheles gambiae str. PEST] 43 0.003
ref|XP_129015.1| similar to LD10749p [Drosophila melanogaster] [... 42 0.005
>gb|AAM14098.1| unknown protein [Arabidopsis thaliana] gi|21689815|gb|AAM67551.1|
unknown protein [Arabidopsis thaliana]
gi|26452808|dbj|BAC43484.1| unknown protein [Arabidopsis
thaliana]
Length = 124
Score = 62.4 bits (150), Expect = 4e-09
Identities = 28/44 (63%), Positives = 36/44 (81%)
Frame = -1
Query: 309 QAPYYDPRTTLRYANTDVFKIIRALPNDYVQRYLALRNAAVVLK 178
+APY DPRT LRYAN VF+ +R+L +D V +YL++RNAAVVLK
Sbjct: 81 EAPYVDPRTNLRYANAHVFQTVRSLSSDQVHQYLSIRNAAVVLK 124
>gb|EAA32997.1| hypothetical protein [Neurospora crassa]
Length = 222
Score = 49.3 bits (116), Expect = 3e-05
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = -1
Query: 312 LQAPYYDPRTTLRYANTDVFKIIRALPNDYVQRYLALRNAAVVLK 178
L APY DP+T LRY N +VF +IR+LP +++L R A VLK
Sbjct: 178 LSAPYIDPKTRLRYHNAEVFAMIRSLPQGVGEQFLEARGAHTVLK 222
>ref|NP_593143.1| hypothetical protein [Schizosaccharomyces pombe]
gi|11359124|pir||T50145 hypothetical protein SPAC222.04c
[imported] - fission yeast (Schizosaccharomyces pombe)
gi|6433989|emb|CAB60696.1| hypothetical protein; similar
to S. cerevisiae YEL044W [Schizosaccharomyces pombe]
Length = 117
Score = 46.6 bits (109), Expect = 2e-04
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = -1
Query: 312 LQAPYYDPRTTLRYANTDVFKIIRALPNDYVQRYLALRNAAVVLK 178
L A Y DP+T LRY N +++ +IR LP+ Q YL LR++ VVLK
Sbjct: 73 LLAIYTDPKTRLRYHNKEIYGLIRELPSGADQEYLKLRSSDVVLK 117
>gb|EAA12521.1| agCP11310 [Anopheles gambiae str. PEST]
Length = 113
Score = 42.7 bits (99), Expect = 0.003
Identities = 20/44 (45%), Positives = 26/44 (58%)
Frame = -1
Query: 312 LQAPYYDPRTTLRYANTDVFKIIRALPNDYVQRYLALRNAAVVL 181
L APY DP + LRY N + ++ IR P D YLALR A ++
Sbjct: 70 LIAPYTDPHSKLRYHNVEEYQTIRTFPMDLTAGYLALRGATSIV 113
>ref|XP_129015.1| similar to LD10749p [Drosophila melanogaster] [Mus musculus]
gi|27369894|ref|NP_766213.1| RIKEN cDNA D030070L09;
hypothetical protein D030070L09 [Mus musculus]
gi|26346164|dbj|BAC36733.1| unnamed protein product [Mus
musculus] gi|26350735|dbj|BAC39004.1| unnamed protein
product [Mus musculus]
Length = 191
Score = 42.0 bits (97), Expect = 0.005
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = -1
Query: 312 LQAPYYDPRTTLRYANTDVFKIIRALPNDYVQRYLALRNAAVVL 181
L A Y DP++ LR++ + F IR LP+D V YLALR A ++
Sbjct: 147 LLANYTDPQSKLRFSTVEEFSYIRRLPSDVVTGYLALRKATSIV 190
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 442,900,384
Number of Sequences: 1393205
Number of extensions: 8271983
Number of successful extensions: 12603
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 12449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12601
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21243732558
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
