Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013971A_C01 KMC013971A_c01
(615 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_196844.1| peptide transporter - like protein; protein id:... 217 1e-55
dbj|BAB16322.1| putative peptide transporter-like protein [Oryza... 187 9e-47
ref|NP_178313.1| histidine transport protein (PTR2-B); protein i... 115 5e-25
pir||S46236 histidine transport protein - Arabidopsis thaliana g... 115 5e-25
ref|NP_190982.1| peptide transport - like protein; protein id: A... 114 1e-24
>ref|NP_196844.1| peptide transporter - like protein; protein id: At5g13400.1,
supported by cDNA: gi_18252224 [Arabidopsis thaliana]
gi|11358608|pir||T48587 peptide transporter-like protein
- Arabidopsis thaliana gi|7543907|emb|CAB87147.1|
peptide transporter-like protein [Arabidopsis thaliana]
gi|18252225|gb|AAL61945.1| peptide transporter-like
protein [Arabidopsis thaliana]
gi|22136152|gb|AAM91154.1| peptide transporter-like
protein [Arabidopsis thaliana]
Length = 624
Score = 217 bits (552), Expect = 1e-55
Identities = 99/127 (77%), Positives = 116/127 (90%)
Frame = -1
Query: 615 IEHGFEFNFLSAMPNLSAYWLLIQYCLIGVAEVFCIVGLLEFLYEEAPDAMKSIGSAYAA 436
I++GFEFNFL+ MP+L+AYWLLIQYCLIG+AEVFCIVGLLEFLYEEAPDAMKSIGSAYAA
Sbjct: 485 IQNGFEFNFLTQMPDLTAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAA 544
Query: 435 LAGGLGCFAATIINSIIKSLTGKEGKESWLAQNINTGRFDYFYWILTALSLVNFCIFIYS 256
LAGGLGCFAATI+N+I+K+ T +SWL+QNINTGRFD YW+LT LS +NFC+F++S
Sbjct: 545 LAGGLGCFAATILNNIVKAATRDSDGKSWLSQNINTGRFDCLYWLLTLLSFLNFCVFLWS 604
Query: 255 AHRYKYR 235
AHRYKYR
Sbjct: 605 AHRYKYR 611
>dbj|BAB16322.1| putative peptide transporter-like protein [Oryza sativa (japonica
cultivar-group)] gi|20804450|dbj|BAB92147.1| putative
peptide transporter-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 606
Score = 187 bits (475), Expect = 9e-47
Identities = 89/129 (68%), Positives = 103/129 (78%), Gaps = 2/129 (1%)
Frame = -1
Query: 615 IEHGFEFNFLSAMPNLSAYWLLIQYCLIGVAEVFCIVGLLEFLYEEAPDAMKSIGSAYAA 436
I HGF FL+ MP LSAYWLLIQYCLIG+AEVFC+V LLEFLY+EAPDAM+S+ SAYAA
Sbjct: 469 IRHGFLPLFLTPMPGLSAYWLLIQYCLIGLAEVFCLVALLEFLYQEAPDAMRSLASAYAA 528
Query: 435 LAGGLGCFAATIINSIIKSLTG--KEGKESWLAQNINTGRFDYFYWILTALSLVNFCIFI 262
LAGGLGCF AT IN+ + S+TG G+ SWLAQNIN G+FDYFYW+L LS +N +FI
Sbjct: 529 LAGGLGCFLATAINTAVDSITGDIDAGRPSWLAQNINVGKFDYFYWLLAVLSTINLIVFI 588
Query: 261 YSAHRYKYR 235
Y A YKYR
Sbjct: 589 YFAKAYKYR 597
>ref|NP_178313.1| histidine transport protein (PTR2-B); protein id: At2g02040.1,
supported by cDNA: gi_13937184, supported by cDNA:
gi_633939 [Arabidopsis thaliana]
gi|1172704|sp|P46032|PT2B_ARATH Peptide transporter
PTR2-B (Histidine transporting protein)
gi|25410955|pir||C84432 histidine transport protein
(PTR2-B) [imported] - Arabidopsis thaliana
gi|633940|gb|AAB00858.1| transport protein
gi|4406786|gb|AAD20096.1| histidine transport protein
(PTR2-B) [Arabidopsis thaliana]
gi|13937185|gb|AAK50086.1|AF372946_1 At2g02040/F14H20.11
[Arabidopsis thaliana] gi|23506067|gb|AAN28893.1|
At2g02040/F14H20.11 [Arabidopsis thaliana]
Length = 585
Score = 115 bits (288), Expect = 5e-25
Identities = 48/112 (42%), Positives = 77/112 (67%)
Frame = -1
Query: 570 LSAYWLLIQYCLIGVAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAATIINS 391
+S W + QY ++G AEVF +G LEF Y+++PDAM+S+ SA A L LG + +++I +
Sbjct: 470 ISVLWQIPQYFILGAAEVFYFIGQLEFFYDQSPDAMRSLCSALALLTNALGNYLSSLILT 529
Query: 390 IIKSLTGKEGKESWLAQNINTGRFDYFYWILTALSLVNFCIFIYSAHRYKYR 235
++ T + G+E W++ N+N+G DYF+W+L LSLVN ++ +SA RYK +
Sbjct: 530 LVTYFTTRNGQEGWISDNLNSGHLDYFFWLLAGLSLVNMAVYFFSAARYKQK 581
>pir||S46236 histidine transport protein - Arabidopsis thaliana
gi|510238|emb|CAA54634.1| oligopeptide transporter 1-1
[Arabidopsis thaliana] gi|744157|prf||2014244A His
transporter
Length = 586
Score = 115 bits (288), Expect = 5e-25
Identities = 48/112 (42%), Positives = 77/112 (67%)
Frame = -1
Query: 570 LSAYWLLIQYCLIGVAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAATIINS 391
+S W + QY ++G AEVF +G LEF Y+++PDAM+S+ SA A L LG + +++I +
Sbjct: 471 ISVLWQIPQYFILGAAEVFYFIGQLEFFYDQSPDAMRSLCSALALLTNALGNYLSSLILT 530
Query: 390 IIKSLTGKEGKESWLAQNINTGRFDYFYWILTALSLVNFCIFIYSAHRYKYR 235
++ T + G+E W++ N+N+G DYF+W+L LSLVN ++ +SA RYK +
Sbjct: 531 LVTYFTTRNGQEGWISDNLNSGHLDYFFWLLAGLSLVNMAVYFFSAARYKQK 582
>ref|NP_190982.1| peptide transport - like protein; protein id: At3g54140.1,
supported by cDNA: 117581., supported by cDNA:
gi_13430485, supported by cDNA: gi_21280968 [Arabidopsis
thaliana] gi|11358607|pir||T47573 peptide transport-like
protein - Arabidopsis thaliana
gi|6822060|emb|CAB70988.1| peptide transport-like
protein [Arabidopsis thaliana]
gi|13430486|gb|AAK25865.1|AF360155_1 putative peptide
transport protein [Arabidopsis thaliana]
gi|21280969|gb|AAM44932.1| putative peptide transport
protein [Arabidopsis thaliana]
gi|21537000|gb|AAM61341.1| peptide transport-like
protein [Arabidopsis thaliana]
Length = 570
Score = 114 bits (284), Expect = 1e-24
Identities = 47/113 (41%), Positives = 77/113 (67%)
Frame = -1
Query: 573 NLSAYWLLIQYCLIGVAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAATIIN 394
++S +W + QY LIG AEVF +G LEF Y++APDAM+S+ SA + LG + +T++
Sbjct: 451 HMSIFWQIPQYLLIGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVALGNYLSTVLV 510
Query: 393 SIIKSLTGKEGKESWLAQNINTGRFDYFYWILTALSLVNFCIFIYSAHRYKYR 235
+++ +T K GK W+ N+N G DYF+++L LS +NF ++++ + RYKY+
Sbjct: 511 TVVMKITKKNGKPGWIPDNLNRGHLDYFFYLLATLSFLNFLVYLWISKRYKYK 563
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 522,500,438
Number of Sequences: 1393205
Number of extensions: 11333740
Number of successful extensions: 39187
Number of sequences better than 10.0: 223
Number of HSP's better than 10.0 without gapping: 37377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38935
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24854530794
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
