Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013663A_C01 KMC013663A_c01
(530 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_193843.1| G10 - like protein; protein id: At4g21110.1, su... 67 1e-10
emb|CAB55419.1| zhb0011.1 [Oryza sativa (indica cultivar-group)] 64 1e-09
dbj|BAB63707.1| putative G10 protein [Oryza sativa (japonica cul... 64 1e-09
sp|P12805|G10_XENLA G10 PROTEIN gi|85772|pir||S05955 G10 protein... 56 2e-07
ref|NP_003901.1| maternal G10 transcript [Homo sapiens] gi|10823... 55 5e-07
>ref|NP_193843.1| G10 - like protein; protein id: At4g21110.1, supported by cDNA:
gi_15294271 [Arabidopsis thaliana]
gi|7484968|pir||T04942 G10 protein homolog F7J7.50 -
Arabidopsis thaliana gi|2911068|emb|CAA17530.1| G10-like
protein [Arabidopsis thaliana]
gi|7268908|emb|CAB79111.1| G10-like protein [Arabidopsis
thaliana] gi|15294272|gb|AAK95313.1|AF410327_1
AT4g21110/F7J7_50 [Arabidopsis thaliana]
gi|23308281|gb|AAN18110.1| At4g21110/F7J7_50
[Arabidopsis thaliana]
Length = 145
Score = 67.0 bits (162), Expect = 1e-10
Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Frame = -1
Query: 338 KVPQEWDLIESMLRELQA--RETGVDLHDRKRKCESLWPIFQIAHKKNPYVFEADCKMGE 165
K P+ W+LIE LREL A RE D HD KRKCE+LWPIF+++H+++ YV++ + E
Sbjct: 10 KYPEGWELIEPTLRELDAKMREAETDSHDGKRKCETLWPIFKVSHQRSRYVYDLYYRREE 69
Query: 164 V 162
+
Sbjct: 70 I 70
>emb|CAB55419.1| zhb0011.1 [Oryza sativa (indica cultivar-group)]
Length = 888
Score = 63.9 bits (154), Expect = 1e-09
Identities = 29/61 (47%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Frame = -1
Query: 338 KVPQEWDLIESMLRELQA--RETGVDLHDRKRKCESLWPIFQIAHKKNPYVFEADCKMGE 165
K P W+LIE +REL A RE D HD KRKCE+LWPIF+I+H+++ Y+++ + E
Sbjct: 10 KYPGGWELIEPTIRELDAKMREAENDTHDGKRKCEALWPIFRISHQRSRYIYDLYYRRKE 69
Query: 164 V 162
+
Sbjct: 70 I 70
>dbj|BAB63707.1| putative G10 protein [Oryza sativa (japonica cultivar-group)]
Length = 145
Score = 63.9 bits (154), Expect = 1e-09
Identities = 29/61 (47%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Frame = -1
Query: 338 KVPQEWDLIESMLRELQA--RETGVDLHDRKRKCESLWPIFQIAHKKNPYVFEADCKMGE 165
K P W+LIE +REL A RE D HD KRKCE+LWPIF+I+H+++ Y+++ + E
Sbjct: 10 KYPGGWELIEPTIRELDAKMREAENDTHDGKRKCEALWPIFRISHQRSRYIYDLYYRRKE 69
Query: 164 V 162
+
Sbjct: 70 I 70
>sp|P12805|G10_XENLA G10 PROTEIN gi|85772|pir||S05955 G10 protein - African clawed frog
gi|64704|emb|CAA33321.1| G10 protein (AA 1-144) [Xenopus
laevis] gi|27735422|gb|AAH40971.1| Similar to maternal
G10 transcript [Xenopus laevis]
Length = 144
Score = 56.2 bits (134), Expect = 2e-07
Identities = 27/51 (52%), Positives = 34/51 (65%), Gaps = 2/51 (3%)
Frame = -1
Query: 332 PQEWDLIESMLREL--QARETGVDLHDRKRKCESLWPIFQIAHKKNPYVFE 186
P W+LIE L EL + RE D H+ KRK ESLWPIF+I H+K Y+F+
Sbjct: 12 PDGWELIEPTLDELDQKMREAETDPHEGKRKVESLWPIFRIHHQKTRYIFD 62
>ref|NP_003901.1| maternal G10 transcript [Homo sapiens] gi|1082344|pir||S52131 edg-2
protein - human gi|515483|gb|AAA20008.1| G10 homolog;
similar to Xenopus laevis maternal G10 protein,
Swiss-Prot Accession Number P12805
gi|998937|gb|AAB33291.1| maternal transcript G10 homolog
[Homo sapiens] gi|1093961|prf||2105201A phorbol
acetate-inducible protein
Length = 144
Score = 55.1 bits (131), Expect = 5e-07
Identities = 32/74 (43%), Positives = 43/74 (57%), Gaps = 8/74 (10%)
Frame = -1
Query: 338 KVPQE-WDLIESMLREL--QARETGVDLHDRKRKCESLWPIFQIAHKKNPYVFEADCKMG 168
K PQ+ W+LIE L +L + RE + H+ KRK ESLWPIF+I H+K Y+F+ K
Sbjct: 9 KAPQDGWELIEPTLDQLDQKMREAETEPHEGKRKVESLWPIFRIHHQKTRYIFDLFYKRK 68
Query: 167 E-----VCTCYMEG 141
+ CY EG
Sbjct: 69 AYSRELLDICYKEG 82
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 450,757,706
Number of Sequences: 1393205
Number of extensions: 9463557
Number of successful extensions: 23667
Number of sequences better than 10.0: 124
Number of HSP's better than 10.0 without gapping: 22977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23659
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17596710992
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
