Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013476A_C01 KMC013476A_c01
(580 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_197429.1| kinase associated protein phosphatase; protein ... 97 1e-19
pir||A55174 kinase-associated protein phosphatase precursor - Ar... 86 4e-16
emb|CAD20349.1| kinase-associated protein phosophatase [Brassica... 67 2e-10
ref|NP_650778.1| CG6026-PA [Drosophila melanogaster] gi|10726612... 42 0.007
gb|AAO50779.1| similar to Mus musculus (Mouse). Sex-determining ... 41 0.012
>ref|NP_197429.1| kinase associated protein phosphatase; protein id: At5g19280.1,
supported by cDNA: gi_15027992, supported by cDNA:
gi_1709235 [Arabidopsis thaliana]
gi|2507222|sp|P46014|KAPP_ARATH Kinase associated
protein phosphatase gi|1709236|gb|AAB38148.1| kinase
associated protein phosphatase
gi|15027993|gb|AAK76527.1| putative kinase associated
protein phosphatase [Arabidopsis thaliana]
gi|21436053|gb|AAM51227.1| putative kinase associated
protein phosphatase [Arabidopsis thaliana]
Length = 581
Score = 97.1 bits (240), Expect = 1e-19
Identities = 60/142 (42%), Positives = 84/142 (58%)
Frame = +2
Query: 86 NHVTVVLLLMLLLIILFLFFLFKPWRFFFPSRFRSSIKAGVGVGVGELERPLVPDENDAA 265
N + + ++LMLLLI L + F KPWR+F SRFRSS + VG+L+RPL+ D+ +
Sbjct: 7 NIIGLFMVLMLLLISLIILFACKPWRYF--SRFRSSSRFSSTFKVGDLQRPLISDDGNLI 64
Query: 266 SAAANLSFHELPRDYDLEGACYPNEAHFRSPRTHGQELVHKQRFQSFSPSSNLPPGDTLI 445
+ E+ R+YDLEGACY N+ S T G+ +KQR S SP + G++ +
Sbjct: 65 QGQTS----EVTREYDLEGACYQNDGLLHSSLTEGR--FYKQRLPSSSP--HFSQGESFV 116
Query: 446 LDVISHPSQDVDVDVDVGQTLK 511
L+VIS PS + VGQTLK
Sbjct: 117 LEVISEPSD----NALVGQTLK 134
>pir||A55174 kinase-associated protein phosphatase precursor - Arabidopsis
thaliana
Length = 582
Score = 85.5 bits (210), Expect = 4e-16
Identities = 56/144 (38%), Positives = 82/144 (56%), Gaps = 4/144 (2%)
Frame = +2
Query: 92 VTVVLLLMLLLIILFL----FFLFKPWRFFFPSRFRSSIKAGVGVGVGELERPLVPDEND 259
+ ++ L M+L+++L F KPWR+F SRFRSS + VG+L+RPL+ D+ +
Sbjct: 6 MNIIGLFMVLMLLLSSPSSSFSACKPWRYF--SRFRSSSRFSSTFKVGDLQRPLISDDGN 63
Query: 260 AASAAANLSFHELPRDYDLEGACYPNEAHFRSPRTHGQELVHKQRFQSFSPSSNLPPGDT 439
+ E+ R+YDLEGACY N+ S T G+ +KQR S SP + G++
Sbjct: 64 LIQGQTS----EVTREYDLEGACYQNDGLLHSSLTEGR--FYKQRLPSSSP--HFSQGES 115
Query: 440 LILDVISHPSQDVDVDVDVGQTLK 511
+L+VIS PS + VGQTLK
Sbjct: 116 FVLEVISEPSD----NALVGQTLK 135
>emb|CAD20349.1| kinase-associated protein phosophatase [Brassica oleracea]
Length = 563
Score = 67.0 bits (162), Expect = 2e-10
Identities = 55/142 (38%), Positives = 72/142 (49%), Gaps = 8/142 (5%)
Frame = +2
Query: 92 VTVVLLLMLLLIILFLF-----FLFKPWRFFFPSRFRSSIKAGVGVGVGELERPLVPDEN 256
+ +V+LL+L++++LFLF F KPWR+ FRSS +GEL+RPLV D
Sbjct: 9 IIIVILLLLMVLMLFLFSLVILFACKPWRYL--PLFRSST-----FKLGELQRPLVSD-G 60
Query: 257 DAASAAANLSFHELPRDYDLEGACYPNEAHFRSPRTHGQELVHKQRFQSFSPSSNLPPGD 436
D + E R+YDLEGACY NE Q +KQR S SP +L G
Sbjct: 61 DGEHLNQGQTGEEGSREYDLEGACYQNEGIL-------QGRAYKQRLPSSSP--HLNQGR 111
Query: 437 TLILDVISHPSQDV---DVDVD 493
TL HP+ V DV+ D
Sbjct: 112 TL-----KHPADKVSLGDVETD 128
>ref|NP_650778.1| CG6026-PA [Drosophila melanogaster] gi|10726612|gb|AAF55629.2|
CG6026-PA [Drosophila melanogaster]
Length = 1542
Score = 41.6 bits (96), Expect = 0.007
Identities = 26/101 (25%), Positives = 44/101 (42%), Gaps = 1/101 (0%)
Frame = -3
Query: 497 QHQHQHQHLEKDER*HRESKYHLGAN*TK-EKRTETFACEQVPGHGFWVIENELHWDNKH 321
Q QHQ ++ ++ + + +Y L +K+ + + + + H +H
Sbjct: 392 QIQHQQYQEQQQQQLYEQQQYQLQLEKQHLDKQKHPYQQQLEKQQQQQQQQQQQHHQQQH 451
Query: 320 LQDHNL*AIHGMTSLQQQKQHRFHQERGASQAHQHQHQHQP 198
Q H QQ+QH+ HQ++ Q HQHQ QHQP
Sbjct: 452 QQQH------------QQQQHQQHQQQHIQQQHQHQQQHQP 480
>gb|AAO50779.1| similar to Mus musculus (Mouse). Sex-determining region Y protein
(Testis-determining factor) [Dictyostelium discoideum]
Length = 1461
Score = 40.8 bits (94), Expect = 0.012
Identities = 25/99 (25%), Positives = 41/99 (41%)
Frame = -3
Query: 497 QHQHQHQHLEKDER*HRESKYHLGAN*TKEKRTETFACEQVPGHGFWVIENELHWDNKHL 318
Q Q Q QH + + H + + ++++ + +Q H + + ++H
Sbjct: 998 QQQQQQQHHQHQQHHHHQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQ--QQQQQQQHQHQ 1055
Query: 317 QDHNL*AIHGMTSLQQQKQHRFHQERGASQAHQHQHQHQ 201
Q H QQ QH+ HQ + HQHQHQHQ
Sbjct: 1056 QQHQ----------HQQHQHQQHQHQHQQHQHQHQHQHQ 1084
Score = 39.3 bits (90), Expect = 0.036
Identities = 22/99 (22%), Positives = 41/99 (41%)
Frame = -3
Query: 497 QHQHQHQHLEKDER*HRESKYHLGAN*TKEKRTETFACEQVPGHGFWVIENELHWDNKHL 318
QHQ H H ++ ++ ++ + ++++ + +Q + H ++H
Sbjct: 1007 QHQQHHHHQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQQQQHQHQQQHQHQQHQHQ 1066
Query: 317 QDHNL*AIHGMTSLQQQKQHRFHQERGASQAHQHQHQHQ 201
Q + H Q Q QH+ + HQHQHQHQ
Sbjct: 1067 QHQHQ---HQQHQHQHQHQHQHQHQHQHQHQHQHQHQHQ 1102
Score = 36.6 bits (83), Expect = 0.23
Identities = 23/97 (23%), Positives = 36/97 (36%)
Frame = -3
Query: 497 QHQHQHQHLEKDER*HRESKYHLGAN*TKEKRTETFACEQVPGHGFWVIENELHWDNKHL 318
QHQHQHQH + + H+ H +++ ++H
Sbjct: 1074 QHQHQHQHQHQHQHQHQHQHQH---------------------------QHQHQHQHQHQ 1106
Query: 317 QDHNL*AIHGMTSLQQQKQHRFHQERGASQAHQHQHQ 207
H QQ +QH+ HQ++ Q +QH HQ
Sbjct: 1107 HQH-----------QQHQQHQQHQQQHHHQQNQHHHQ 1132
Score = 36.6 bits (83), Expect = 0.23
Identities = 20/99 (20%), Positives = 38/99 (38%)
Frame = -3
Query: 497 QHQHQHQHLEKDER*HRESKYHLGAN*TKEKRTETFACEQVPGHGFWVIENELHWDNKHL 318
QH H Q ++ ++ ++ + +++ + +Q +++ H +H
Sbjct: 1010 QHHHHQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQQQQHQHQQQHQHQQHQHQQHQ 1069
Query: 317 QDHNL*AIHGMTSLQQQKQHRFHQERGASQAHQHQHQHQ 201
H Q Q QH+ + HQHQHQHQ
Sbjct: 1070 HQHQQHQHQHQHQHQHQHQHQHQHQHQHQHQHQHQHQHQ 1108
Score = 36.2 bits (82), Expect = 0.30
Identities = 25/97 (25%), Positives = 41/97 (41%), Gaps = 2/97 (2%)
Frame = -3
Query: 485 QHQHLEKDER*HRESKYHLGAN*TKEKRTETFACEQVPGHGFWVIEN--ELHWDNKHLQD 312
QHQH ++ ++ H++ H ++ + Q P H +N + H ++ Q
Sbjct: 936 QHQHQQQQQQPHQQPHQH--------QQQQHQQPHQQPHHQQQHHQNNHQQHQQHQQHQH 987
Query: 311 HNL*AIHGMTSLQQQKQHRFHQERGASQAHQHQHQHQ 201
H + QQQ+QH HQ+ Q Q Q Q Q
Sbjct: 988 HQQQQLQQQQQQQQQQQHHQHQQHHHHQQQQQQQQQQ 1024
Score = 35.8 bits (81), Expect = 0.40
Identities = 27/101 (26%), Positives = 38/101 (36%), Gaps = 2/101 (1%)
Frame = -3
Query: 497 QHQHQHQHLEKDER*HRESKYHLGAN*TKEKRTETFACEQVPGHGFWVIENELHWDNKHL 318
QHQHQ Q + ++ H + ++ + Q P H + H N H
Sbjct: 936 QHQHQQQQQQPHQQPH------------QHQQQQHQQPHQQPHH------QQQHHQNNHQ 977
Query: 317 --QDHNL*AIHGMTSLQQQKQHRFHQERGASQAHQHQHQHQ 201
Q H H LQQQ+Q + Q+ Q H H Q Q
Sbjct: 978 QHQQHQQHQHHQQQQLQQQQQQQQQQQHHQHQQHHHHQQQQ 1018
Score = 35.4 bits (80), Expect = 0.52
Identities = 22/99 (22%), Positives = 39/99 (39%)
Frame = -3
Query: 497 QHQHQHQHLEKDER*HRESKYHLGAN*TKEKRTETFACEQVPGHGFWVIENELHWDNKHL 318
Q Q Q Q ++ ++ ++ + ++++ + +Q H + H +H
Sbjct: 1017 QQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQQQQHQHQQQHQHQQHQHQQHQHQHQQHQ 1076
Query: 317 QDHNL*AIHGMTSLQQQKQHRFHQERGASQAHQHQHQHQ 201
H H Q Q QH+ + HQHQHQHQ
Sbjct: 1077 HQHQHQHQH-----QHQHQHQHQHQHQHQHQHQHQHQHQ 1110
Score = 35.0 bits (79), Expect = 0.67
Identities = 23/99 (23%), Positives = 41/99 (41%)
Frame = -3
Query: 497 QHQHQHQHLEKDER*HRESKYHLGAN*TKEKRTETFACEQVPGHGFWVIENELHWDNKHL 318
Q HQ QH + + + H++ + H ++++ + +Q ++ H +
Sbjct: 964 QPHHQQQHHQNNHQQHQQHQQH---QHHQQQQLQQQQQQQQQQQHHQHQQHHHHQQQQQQ 1020
Query: 317 QDHNL*AIHGMTSLQQQKQHRFHQERGASQAHQHQHQHQ 201
Q QQQ+Q Q++ Q HQHQ QHQ
Sbjct: 1021 QQQQQQQQQQQQQQQQQQQQHQQQQQQQQQQHQHQQQHQ 1059
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 519,928,122
Number of Sequences: 1393205
Number of extensions: 11796002
Number of successful extensions: 88677
Number of sequences better than 10.0: 222
Number of HSP's better than 10.0 without gapping: 59598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 81165
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21426319650
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
