Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013183A_C01 KMC013183A_c01
(533 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O82043|ILV5_PEA Ketol-acid reductoisomerase, chloroplast prec... 263 1e-69
emb|CAB61890.1| acetohydroxy acid isomeroreductase [Pisum sativum] 260 6e-69
pir||S30145 ketol-acid reductoisomerase (EC 1.1.1.86) precursor ... 218 5e-56
ref|NP_191420.1| ketol-acid reductoisomerase; protein id: At3g58... 218 5e-56
emb|CAA48253.1| ketol-acid reductoisomerase [Arabidopsis thaliana] 218 5e-56
>sp|O82043|ILV5_PEA Ketol-acid reductoisomerase, chloroplast precursor
(Acetohydroxy-acid reductoisomerase)
(Alpha-keto-beta-hydroxylacil reductoisomerase)
gi|7431346|pir||T06825 ketol-acid reductoisomerase (EC
1.1.1.86) - garden pea gi|3452497|emb|CAA76854.1|
ketol-acid reductoisomerase [Pisum sativum]
Length = 581
Score = 263 bits (672), Expect = 1e-69
Identities = 135/174 (77%), Positives = 149/174 (85%)
Frame = +1
Query: 10 AATSSSCSTAFSTPSQTLAKPAAKCFAATNLSFSKPSLRPLRAQRCVAVGTGALGARMVS 189
AA +SSCSTA S S+TLAKP A FA TNLSFSK S + +RA+R + VG+ ALGA VS
Sbjct: 2 AAVTSSCSTAISASSKTLAKPVAASFAPTNLSFSKLSPQSIRARRSITVGS-ALGATKVS 60
Query: 190 AAPVASPAKLDFDTAIFKKERVNLAGHDEYIVKGGRDLFHLLPDAFKGIKQIGVIGWGSQ 369
A P P LDF+T++FKKERVNLAGH+EYIV+GGRDLFHLLPDAFKGIKQIGVIGWGSQ
Sbjct: 61 APPATHPVSLDFETSVFKKERVNLAGHEEYIVRGGRDLFHLLPDAFKGIKQIGVIGWGSQ 120
Query: 370 GPAQAQNLRDSLAEAKSDIVVKIGLRKGSSSFNEARGAGFSEENGTLGDIYETI 531
GPAQAQNLRDSL EAKSDIVVK+GLRKGSSSFNEAR AGFSEE GTLGDI+ETI
Sbjct: 121 GPAQAQNLRDSLVEAKSDIVVKVGLRKGSSSFNEAREAGFSEEKGTLGDIWETI 174
>emb|CAB61890.1| acetohydroxy acid isomeroreductase [Pisum sativum]
Length = 581
Score = 260 bits (665), Expect = 6e-69
Identities = 134/174 (77%), Positives = 148/174 (85%)
Frame = +1
Query: 10 AATSSSCSTAFSTPSQTLAKPAAKCFAATNLSFSKPSLRPLRAQRCVAVGTGALGARMVS 189
AA +SSCSTA S S+TLAKP A FA TNLSFSK S + +RA+R + VG+ ALGA VS
Sbjct: 2 AAVTSSCSTAISASSKTLAKPVAASFAPTNLSFSKLSPQSIRARRSITVGS-ALGATKVS 60
Query: 190 AAPVASPAKLDFDTAIFKKERVNLAGHDEYIVKGGRDLFHLLPDAFKGIKQIGVIGWGSQ 369
A P P LDF+T++FKKERVNLAGH+EYIV+GGRDLFHLLPDAFKGIKQIG IGWGSQ
Sbjct: 61 APPATHPVSLDFETSVFKKERVNLAGHEEYIVRGGRDLFHLLPDAFKGIKQIGGIGWGSQ 120
Query: 370 GPAQAQNLRDSLAEAKSDIVVKIGLRKGSSSFNEARGAGFSEENGTLGDIYETI 531
GPAQAQNLRDSL EAKSDIVVK+GLRKGSSSFNEAR AGFSEE GTLGDI+ETI
Sbjct: 121 GPAQAQNLRDSLVEAKSDIVVKVGLRKGSSSFNEAREAGFSEEKGTLGDIWETI 174
>pir||S30145 ketol-acid reductoisomerase (EC 1.1.1.86) precursor - Arabidopsis
thaliana
Length = 591
Score = 218 bits (554), Expect = 5e-56
Identities = 119/185 (64%), Positives = 140/185 (75%), Gaps = 9/185 (4%)
Frame = +1
Query: 4 MAAATSS-----SCSTAFSTPSQTLAKPAAKCFAATNLSFSKPSLRPLRAQRCVAVGTGA 168
MAAATSS SC + S+ S+TL A+ A N+ F S + LR+ G GA
Sbjct: 1 MAAATSSIAPSLSCPSP-SSSSKTLWSSKARTLALPNIGFLSSSSKSLRSLTATVAGNGA 59
Query: 169 LG----ARMVSAAPVASPAKLDFDTAIFKKERVNLAGHDEYIVKGGRDLFHLLPDAFKGI 336
G ARMVS++ V +P LDF+T++FKKE+V+LAG++EYIV+GGRDLF LPDAFKGI
Sbjct: 60 TGSSLAARMVSSSAVKAPVSLDFETSVFKKEKVSLAGYEEYIVRGGRDLFKHLPDAFKGI 119
Query: 337 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSSSFNEARGAGFSEENGTLGD 516
KQIGVIGWGSQGPAQAQNLRDSL EAKSDIVVKIGLRKGS SF EAR AGF+EE+GTLGD
Sbjct: 120 KQIGVIGWGSQGPAQAQNLRDSLVEAKSDIVVKIGLRKGSRSFEEARAAGFTEESGTLGD 179
Query: 517 IYETI 531
I+ETI
Sbjct: 180 IWETI 184
>ref|NP_191420.1| ketol-acid reductoisomerase; protein id: At3g58610.1, supported by
cDNA: gi_11993866, supported by cDNA: gi_13194831,
supported by cDNA: gi_13265432, supported by cDNA:
gi_17063194, supported by cDNA: gi_17529223, supported
by cDNA: gi_20465492 [Arabidopsis thaliana]
gi|12644387|sp|Q05758|ILV5_ARATH Ketol-acid
reductoisomerase, chloroplast precursor
(Acetohydroxy-acid reductoisomerase)
(Alpha-keto-beta-hydroxylacil reductoisomerase)
gi|11251579|pir||T45681 ketol-acid reductoisomerase -
Arabidopsis thaliana gi|402552|emb|CAA49506.1|
ketol-acid reductoisomerase [Arabidopsis thaliana]
gi|6735378|emb|CAB68199.1| ketol-acid reductoisomerase
[Arabidopsis thaliana]
gi|11692838|gb|AAG40022.1|AF324671_1 AT3g58610
[Arabidopsis thaliana]
gi|11993867|gb|AAG42917.1|AF329500_1 putative ketol-acid
reductoisomerase [Arabidopsis thaliana]
gi|17063195|gb|AAL32973.1| AT3g58610/F14P22_200
[Arabidopsis thaliana] gi|17529224|gb|AAL38839.1|
putative ketol-acid reductoisomerase [Arabidopsis
thaliana] gi|20465493|gb|AAM20206.1| putative ketol-acid
reductoisomerase [Arabidopsis thaliana]
gi|23397061|gb|AAN31816.1| putative ketol-acid
reductoisomerase [Arabidopsis thaliana]
gi|23463055|gb|AAN33197.1| At3g58610/F14P22_200
[Arabidopsis thaliana]
Length = 591
Score = 218 bits (554), Expect = 5e-56
Identities = 119/185 (64%), Positives = 140/185 (75%), Gaps = 9/185 (4%)
Frame = +1
Query: 4 MAAATSS-----SCSTAFSTPSQTLAKPAAKCFAATNLSFSKPSLRPLRAQRCVAVGTGA 168
MAAATSS SC + S+ S+TL A+ A N+ F S + LR+ G GA
Sbjct: 1 MAAATSSIAPSLSCPSP-SSSSKTLWSSKARTLALPNIGFLSSSSKSLRSLTATVAGNGA 59
Query: 169 LG----ARMVSAAPVASPAKLDFDTAIFKKERVNLAGHDEYIVKGGRDLFHLLPDAFKGI 336
G ARMVS++ V +P LDF+T++FKKE+V+LAG++EYIV+GGRDLF LPDAFKGI
Sbjct: 60 TGSSLAARMVSSSAVKAPVSLDFETSVFKKEKVSLAGYEEYIVRGGRDLFKHLPDAFKGI 119
Query: 337 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSSSFNEARGAGFSEENGTLGD 516
KQIGVIGWGSQGPAQAQNLRDSL EAKSDIVVKIGLRKGS SF EAR AGF+EE+GTLGD
Sbjct: 120 KQIGVIGWGSQGPAQAQNLRDSLVEAKSDIVVKIGLRKGSRSFEEARAAGFTEESGTLGD 179
Query: 517 IYETI 531
I+ETI
Sbjct: 180 IWETI 184
>emb|CAA48253.1| ketol-acid reductoisomerase [Arabidopsis thaliana]
Length = 591
Score = 218 bits (554), Expect = 5e-56
Identities = 119/185 (64%), Positives = 140/185 (75%), Gaps = 9/185 (4%)
Frame = +1
Query: 4 MAAATSS-----SCSTAFSTPSQTLAKPAAKCFAATNLSFSKPSLRPLRAQRCVAVGTGA 168
MAAATSS SC + S+ S+TL A+ A N+ F S + LR+ G GA
Sbjct: 1 MAAATSSIAPSLSCPSP-SSSSKTLWSSKARTLALPNIGFLSSSSKSLRSLTATVAGNGA 59
Query: 169 LG----ARMVSAAPVASPAKLDFDTAIFKKERVNLAGHDEYIVKGGRDLFHLLPDAFKGI 336
G ARMVS++ V +P LDF+T++FKKE+V+LAG++EYIV+GGRDLF LPDAFKGI
Sbjct: 60 TGSSLAARMVSSSAVKAPVSLDFETSVFKKEKVSLAGYEEYIVRGGRDLFKHLPDAFKGI 119
Query: 337 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSSSFNEARGAGFSEENGTLGD 516
KQIGVIGWGSQGPAQAQNLRDSL EAKSDIVVKIGLRKGS SF EAR AGF+EE+GTLGD
Sbjct: 120 KQIGVIGWGSQGPAQAQNLRDSLVEAKSDIVVKIGLRKGSRSFEEARAAGFTEESGTLGD 179
Query: 517 IYETI 531
I+ETI
Sbjct: 180 IWETI 184
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.316 0.131 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 503,220,171
Number of Sequences: 1393205
Number of extensions: 12516724
Number of successful extensions: 71668
Number of sequences better than 10.0: 505
Number of HSP's better than 10.0 without gapping: 51198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67139
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17885181664
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
