Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013148A_C01 KMC013148A_c01
(926 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||H86278 F14L17.20 protein - Arabidopsis thaliana gi|7262685|... 210 3e-53
ref|NP_172895.1| hypothetical protein; protein id: At1g14430.1 [... 208 8e-53
dbj|BAB90014.1| putative glyoxal oxidase [Oryza sativa (japonica... 194 2e-48
gb|AAL84955.1| AT5g19580/T20D1_100 [Arabidopsis thaliana] gi|247... 191 1e-47
ref|NP_197459.1| putative protein; protein id: At5g19580.1, supp... 191 1e-47
>pir||H86278 F14L17.20 protein - Arabidopsis thaliana
gi|7262685|gb|AAF43943.1|AC012188_20 Weak similarity to
glyoxal oxidase (glx2) from Phanerochaete chrysosporium
gb|L47287. [Arabidopsis thaliana]
Length = 564
Score = 210 bits (534), Expect = 3e-53
Identities = 113/245 (46%), Positives = 157/245 (63%), Gaps = 3/245 (1%)
Frame = -2
Query: 925 GRMVITXNDNKWEMEYMPEPRLLHDMLILPNGNILIINGAKHGCAGYDNARNASLEPYLY 746
GR+ +T D KW ME MP PR++ DML+LPNG++LIINGA +G AG+++A NA L P LY
Sbjct: 324 GRLKVTDPDPKWVMEQMPSPRVMSDMLLLPNGDVLIINGAANGTAGWEDATNAVLNPILY 383
Query: 745 SPKKR-LGKRFRVLKSTKIARMYHSSATLLPDGRVLVAGGNPHGRYSFHNVAYPTELRLQ 569
P++ +RF +L T+I RMYHS++ LL DGRVLV G NPH Y+F YPTEL L+
Sbjct: 384 LPEEPDQTRRFEILTPTRIPRMYHSASLLLSDGRVLVGGSNPHRNYNFTARPYPTELSLE 443
Query: 568 AFVPHYMHRRYHSWRPSNLTVKSGGGGERGVIGYGAEFRVRFLVGT--RPSNEVAFSVYA 395
A++P Y+ +Y RP+ +TV+ G + YG F V F + V+ + A
Sbjct: 444 AYLPRYLDPQYARVRPTIITVELAGN-----MLYGQAFAVTFAIPAFGMFDGGVSVRLVA 498
Query: 394 PPFTTHSVAMNQRMLKLRCRSMVRSSGGWVDAVLEAPPSPRVAPSGYYLLTVVNGGIPSV 215
P F+THS AMNQR+L LR R + + S A ++ P + VAP GYY++ VV+ GIPSV
Sbjct: 499 PSFSTHSTAMNQRLLVLRVRRVSQLSVFAYKADVDGPTNSYVAPPGYYMMFVVHRGIPSV 558
Query: 214 SQWIQ 200
+ W++
Sbjct: 559 AVWVK 563
>ref|NP_172895.1| hypothetical protein; protein id: At1g14430.1 [Arabidopsis thaliana]
Length = 849
Score = 208 bits (530), Expect = 8e-53
Identities = 113/243 (46%), Positives = 155/243 (63%), Gaps = 3/243 (1%)
Frame = -2
Query: 925 GRMVITXNDNKWEMEYMPEPRLLHDMLILPNGNILIINGAKHGCAGYDNARNASLEPYLY 746
GR+ +T D KW ME MP PR++ DML+LPNG++LIINGA +G AG+++A NA L P LY
Sbjct: 324 GRLKVTDPDPKWVMEQMPSPRVMSDMLLLPNGDVLIINGAANGTAGWEDATNAVLNPILY 383
Query: 745 SPKKR-LGKRFRVLKSTKIARMYHSSATLLPDGRVLVAGGNPHGRYSFHNVAYPTELRLQ 569
P++ +RF +L T+I RMYHS++ LL DGRVLV G NPH Y+F YPTEL L+
Sbjct: 384 LPEEPDQTRRFEILTPTRIPRMYHSASLLLSDGRVLVGGSNPHRNYNFTARPYPTELSLE 443
Query: 568 AFVPHYMHRRYHSWRPSNLTVKSGGGGERGVIGYGAEFRVRFLVGT--RPSNEVAFSVYA 395
A++P Y+ +Y RP+ +TV+ G + YG F V F + V+ + A
Sbjct: 444 AYLPRYLDPQYARVRPTIITVELAGN-----MLYGQAFAVTFAIPAFGMFDGGVSVRLVA 498
Query: 394 PPFTTHSVAMNQRMLKLRCRSMVRSSGGWVDAVLEAPPSPRVAPSGYYLLTVVNGGIPSV 215
P F+THS AMNQR+L LR R + + S A ++ P + VAP GYY++ VV+ GIPSV
Sbjct: 499 PSFSTHSTAMNQRLLVLRVRRVSQLSVFAYKADVDGPTNSYVAPPGYYMMFVVHRGIPSV 558
Query: 214 SQW 206
+ W
Sbjct: 559 AVW 561
>dbj|BAB90014.1| putative glyoxal oxidase [Oryza sativa (japonica cultivar-group)]
Length = 624
Score = 194 bits (493), Expect = 2e-48
Identities = 102/234 (43%), Positives = 141/234 (59%), Gaps = 2/234 (0%)
Frame = -2
Query: 895 KWEMEYMPEPRLLHDMLILPNGNILIINGAKHGCAGYDNARNASLEPYLYSPKKRLGKRF 716
+W ++ MP R++ D+LILP G++L++NGA GC+G+ R A L P LYSP R GKRF
Sbjct: 393 RWALDQMPSGRVMGDVLILPTGDLLMLNGAAKGCSGWGFGRQALLSPVLYSPYLRRGKRF 452
Query: 715 RVLKSTKIARMYHSSATLLPDGRVLVAGGNPHGRYSFHNVAYPTELRLQAFVPHYMHRRY 536
RVL + I RMYHS++ LLPD VLVAG N + Y+F V +PTE+R++ F P Y+ +
Sbjct: 453 RVLNPSNIPRMYHSTSALLPDATVLVAGSNTNSAYNFSGVDFPTEVRVERFTPPYLSPQL 512
Query: 535 HSWRPSNLTVKSGGGGERGVIGYGAEFRVRFLVGTRPSNEVAFSV--YAPPFTTHSVAMN 362
RP+ G G R YGA F RF + + F V YAPPFTTH +MN
Sbjct: 513 SPNRPAIDAASVPGDGMR----YGARFTFRFTTPAQGVGQGDFKVTMYAPPFTTHGYSMN 568
Query: 361 QRMLKLRCRSMVRSSGGWVDAVLEAPPSPRVAPSGYYLLTVVNGGIPSVSQWIQ 200
QR+L L + + G ++APP P +AP GYY++ VV G+PS + W++
Sbjct: 569 QRLLILPVTAFA-AQGQRHTVTVDAPPKPELAPPGYYMVYVVAKGVPSKAAWVK 621
>gb|AAL84955.1| AT5g19580/T20D1_100 [Arabidopsis thaliana] gi|24797058|gb|AAN64541.1|
At5g19580/T20D1_100 [Arabidopsis thaliana]
Length = 594
Score = 191 bits (486), Expect = 1e-47
Identities = 102/243 (41%), Positives = 146/243 (59%), Gaps = 2/243 (0%)
Frame = -2
Query: 922 RMVITXNDNKWEMEYMPEPRLLHDMLILPNGNILIINGAKHGCAGYDNARNASLEPYLYS 743
R+ I +W+ E MP PR++ D +ILPNG+IL++NGAK GC+G+ ++ + P LY
Sbjct: 357 RIRINSAKPRWKTEMMPTPRIMSDTVILPNGDILLVNGAKRGCSGWGYGKDPAFAPLLYK 416
Query: 742 PKKRLGKRFRVLKSTKIARMYHSSATLLPDGRVLVAGGNPHGRYSFHNVAYPTELRLQAF 563
P GKRFR LK T I RMYHSSA +LPDG+VLV G N + Y + NV +PTELR++ F
Sbjct: 417 PHAARGKRFRQLKPTTIPRMYHSSAIILPDGKVLVGGSNTNDGYKY-NVEFPTELRVEKF 475
Query: 562 VPHYMHRRYHSWRPSNLTVKSGGGGERGVIGYGAEFRVRFLVGTRPSNE--VAFSVYAPP 389
P Y+ + RP +T G + YG F V+ + + + + + ++ AP
Sbjct: 476 SPPYLDPALANIRPKIVTT-----GTPKQVKYGQFFNVKVDLKEKGATKGNLKVTMLAPA 530
Query: 388 FTTHSVAMNQRMLKLRCRSMVRSSGGWVDAVLEAPPSPRVAPSGYYLLTVVNGGIPSVSQ 209
FTTHS++MN RML L + V+ +G D APP+ +AP GYYL+ + G+PS +
Sbjct: 531 FTTHSISMNMRMLILGVNN-VKPAGAGYDIQAVAPPNGNIAPPGYYLIFAIYKGVPSTGE 589
Query: 208 WIQ 200
WIQ
Sbjct: 590 WIQ 592
>ref|NP_197459.1| putative protein; protein id: At5g19580.1, supported by cDNA:
gi_19310436 [Arabidopsis thaliana]
Length = 594
Score = 191 bits (486), Expect = 1e-47
Identities = 102/243 (41%), Positives = 146/243 (59%), Gaps = 2/243 (0%)
Frame = -2
Query: 922 RMVITXNDNKWEMEYMPEPRLLHDMLILPNGNILIINGAKHGCAGYDNARNASLEPYLYS 743
R+ I +W+ E MP PR++ D +ILPNG+IL++NGAK GC+G+ ++ + P LY
Sbjct: 357 RIRINSAKPRWKTEMMPTPRIMSDTVILPNGDILLVNGAKRGCSGWGYGKDPAFAPLLYK 416
Query: 742 PKKRLGKRFRVLKSTKIARMYHSSATLLPDGRVLVAGGNPHGRYSFHNVAYPTELRLQAF 563
P GKRFR LK T I RMYHSSA +LPDG+VLV G N + Y + NV +PTELR++ F
Sbjct: 417 PHAARGKRFRQLKPTTIPRMYHSSAIILPDGKVLVGGSNTNDGYKY-NVEFPTELRVEKF 475
Query: 562 VPHYMHRRYHSWRPSNLTVKSGGGGERGVIGYGAEFRVRFLVGTRPSNE--VAFSVYAPP 389
P Y+ + RP +T G + YG F V+ + + + + + ++ AP
Sbjct: 476 SPPYLDPALANIRPKIVTT-----GTPKQVKYGQFFNVKVDLKEKGATKGNLKVTMLAPA 530
Query: 388 FTTHSVAMNQRMLKLRCRSMVRSSGGWVDAVLEAPPSPRVAPSGYYLLTVVNGGIPSVSQ 209
FTTHS++MN RML L + V+ +G D APP+ +AP GYYL+ + G+PS +
Sbjct: 531 FTTHSISMNMRMLILGVNN-VKPAGAGYDIQAVAPPNGNIAPPGYYLIFAIYKGVPSTGE 589
Query: 208 WIQ 200
WIQ
Sbjct: 590 WIQ 592
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 879,900,732
Number of Sequences: 1393205
Number of extensions: 21091434
Number of successful extensions: 71673
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 62056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70750
length of database: 448,689,247
effective HSP length: 123
effective length of database: 277,325,032
effective search space used: 51305130920
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
