Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013130A_C01 KMC013130A_c01
(716 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_192626.1| putative arginase; protein id: At4g08870.1, sup... 248 6e-65
sp|O49046|ARGI_SOYBN Arginase gi|7488699|pir||T06222 probable ar... 248 6e-65
gb|AAM64858.1| putative arginase [Arabidopsis thaliana] 245 4e-64
ref|NP_192629.1| arginase; protein id: At4g08900.1, supported by... 240 1e-62
gb|AAK07744.1|AF130440_1 arginase [Pinus taeda] 229 3e-59
>ref|NP_192626.1| putative arginase; protein id: At4g08870.1, supported by cDNA:
33985. [Arabidopsis thaliana]
gi|11131457|sp|Q9ZPF5|ARG2_ARATH Probable arginase
gi|25407458|pir||C85089 probable arginase [imported] -
Arabidopsis thaliana gi|4325375|gb|AAD17371.1| similar
to arginases (Pfam: PF00491, Score=353.2, E=1.4e-119,
N=1) [Arabidopsis thaliana] gi|7267529|emb|CAB78011.1|
putative arginase [Arabidopsis thaliana]
gi|28392862|gb|AAO41868.1| unknown protein [Arabidopsis
thaliana]
Length = 344
Score = 248 bits (633), Expect = 6e-65
Identities = 123/138 (89%), Positives = 129/138 (93%)
Frame = -1
Query: 716 FARIMEGGYARRLLQVGIRSINYEGREQAKKFGVEQYEMRTYSKDRPFLENLKLGEGVKG 537
FARIMEGGYARRLLQVGIRSIN EGREQ K+FGVEQYEMRT+SKDR LENLKLGEGVKG
Sbjct: 207 FARIMEGGYARRLLQVGIRSINKEGREQGKRFGVEQYEMRTFSKDRQMLENLKLGEGVKG 266
Query: 536 VYISIDVDCLDPGYAPGVSHHESGGLSFRDVMNVLQNLQGDIVGGDVVEYNPQRDTADDM 357
VYISIDVDCLDPG+A GVSH E GGLSFRDV+N+L NLQGD+VG DVVEYNPQRDTADDM
Sbjct: 267 VYISIDVDCLDPGFAHGVSHFEPGGLSFRDVLNILHNLQGDLVGADVVEYNPQRDTADDM 326
Query: 356 TAMVAAKFVRELAAKMSK 303
TAMVAAKFVRELAAKMSK
Sbjct: 327 TAMVAAKFVRELAAKMSK 344
>sp|O49046|ARGI_SOYBN Arginase gi|7488699|pir||T06222 probable arginase (EC 3.5.3.1) -
soybean gi|2661128|gb|AAC04613.1| arginase [Glycine max]
Length = 350
Score = 248 bits (633), Expect = 6e-65
Identities = 124/138 (89%), Positives = 130/138 (93%)
Frame = -1
Query: 716 FARIMEGGYARRLLQVGIRSINYEGREQAKKFGVEQYEMRTYSKDRPFLENLKLGEGVKG 537
FARIMEGGYARRLLQVGIRSIN EGREQAKKFGVEQ+EMR +SKDRPFLENL LGEG KG
Sbjct: 213 FARIMEGGYARRLLQVGIRSINKEGREQAKKFGVEQFEMRHFSKDRPFLENLNLGEGAKG 272
Query: 536 VYISIDVDCLDPGYAPGVSHHESGGLSFRDVMNVLQNLQGDIVGGDVVEYNPQRDTADDM 357
VYISIDVDCLDPGYA GVSH+ESGGLSFRDVMN+LQNL+GDIVGGDVVEYNPQR+ D M
Sbjct: 273 VYISIDVDCLDPGYAVGVSHYESGGLSFRDVMNMLQNLKGDIVGGDVVEYNPQREPPDRM 332
Query: 356 TAMVAAKFVRELAAKMSK 303
TAMVAAKFVRELAAKMSK
Sbjct: 333 TAMVAAKFVRELAAKMSK 350
>gb|AAM64858.1| putative arginase [Arabidopsis thaliana]
Length = 344
Score = 245 bits (626), Expect = 4e-64
Identities = 122/138 (88%), Positives = 128/138 (92%)
Frame = -1
Query: 716 FARIMEGGYARRLLQVGIRSINYEGREQAKKFGVEQYEMRTYSKDRPFLENLKLGEGVKG 537
FARIMEGGYARRLLQVGIRSIN EGREQ K+FGVEQYEMRT+SKDR LENLKLGEGVKG
Sbjct: 207 FARIMEGGYARRLLQVGIRSINKEGREQGKRFGVEQYEMRTFSKDRQMLENLKLGEGVKG 266
Query: 536 VYISIDVDCLDPGYAPGVSHHESGGLSFRDVMNVLQNLQGDIVGGDVVEYNPQRDTADDM 357
VYISIDVDCLDPG+A GVSH E GGLSFRDV+N+L NLQGD+VG DVV YNPQRDTADDM
Sbjct: 267 VYISIDVDCLDPGFAHGVSHFEPGGLSFRDVLNILHNLQGDLVGADVVGYNPQRDTADDM 326
Query: 356 TAMVAAKFVRELAAKMSK 303
TAMVAAKFVRELAAKMSK
Sbjct: 327 TAMVAAKFVRELAAKMSK 344
>ref|NP_192629.1| arginase; protein id: At4g08900.1, supported by cDNA: gi_15450350,
supported by cDNA: gi_16974474, supported by cDNA:
gi_602421 [Arabidopsis thaliana]
gi|1168493|sp|P46637|ARG1_ARATH Arginase
gi|25407461|pir||F85089 arginase [imported] -
Arabidopsis thaliana gi|602422|gb|AAA85816.1| arginase
gi|4325373|gb|AAD17369.1| Arabidopsis thaliana arginase
(SW:P46637) (Pfam: PF00491, Score=419.6, E=3.7e-142 N=1)
gi|7267532|emb|CAB78014.1| arginase [Arabidopsis
thaliana] gi|15450351|gb|AAK96469.1| AT4g08900/T3H13_7
[Arabidopsis thaliana] gi|16974475|gb|AAL31241.1|
AT4g08900/T3H13_7 [Arabidopsis thaliana]
Length = 342
Score = 240 bits (613), Expect = 1e-62
Identities = 118/138 (85%), Positives = 126/138 (90%)
Frame = -1
Query: 716 FARIMEGGYARRLLQVGIRSINYEGREQAKKFGVEQYEMRTYSKDRPFLENLKLGEGVKG 537
FARIMEGGYARRLLQVGIRSIN EGREQ K+FGVEQYEMRT+SKDRP LENLKLGEGVKG
Sbjct: 205 FARIMEGGYARRLLQVGIRSINQEGREQGKRFGVEQYEMRTFSKDRPMLENLKLGEGVKG 264
Query: 536 VYISIDVDCLDPGYAPGVSHHESGGLSFRDVMNVLQNLQGDIVGGDVVEYNPQRDTADDM 357
VYISIDVDCLDP +APGVSH E GGLSFRDV+N+L NLQ D+VG DVVE+NPQRDT D M
Sbjct: 265 VYISIDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQADVVGADVVEFNPQRDTVDGM 324
Query: 356 TAMVAAKFVRELAAKMSK 303
TAMVAAK VRELAAK+SK
Sbjct: 325 TAMVAAKLVRELAAKISK 342
>gb|AAK07744.1|AF130440_1 arginase [Pinus taeda]
Length = 341
Score = 229 bits (584), Expect = 3e-59
Identities = 114/138 (82%), Positives = 123/138 (88%)
Frame = -1
Query: 716 FARIMEGGYARRLLQVGIRSINYEGREQAKKFGVEQYEMRTYSKDRPFLENLKLGEGVKG 537
FARIMEGG+ARRLLQVGIRSI EGREQ K+FGVEQYEM ++SKDR FLENLKLGEGVKG
Sbjct: 201 FARIMEGGHARRLLQVGIRSITKEGREQGKRFGVEQYEMHSFSKDRDFLENLKLGEGVKG 260
Query: 536 VYISIDVDCLDPGYAPGVSHHESGGLSFRDVMNVLQNLQGDIVGGDVVEYNPQRDTADDM 357
VYISIDVDCLDP +APGVSH E GGLSFR VMN++QNLQGDIV DVVE+NPQRDT D M
Sbjct: 261 VYISIDVDCLDPAFAPGVSHLEPGGLSFRGVMNLVQNLQGDIVAADVVEFNPQRDTVDGM 320
Query: 356 TAMVAAKFVRELAAKMSK 303
TAMVAAK VREL +KMSK
Sbjct: 321 TAMVAAKLVRELTSKMSK 338
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 577,611,984
Number of Sequences: 1393205
Number of extensions: 12137869
Number of successful extensions: 27911
Number of sequences better than 10.0: 205
Number of HSP's better than 10.0 without gapping: 27060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27803
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 33217548346
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
