Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013096A_C01 KMC013096A_c01
(638 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO23951.1| phosphoribosylformylglycinamidine synthase [Glyci... 207 7e-53
gb|AAL55431.1| formylglycinamide ribonucleotide amidotransferase... 206 3e-52
ref|NP_177566.1| putative phosphoribosylformylglycinamidine synt... 185 5e-46
dbj|BAB92637.1| putative formylglycinamide ribonucleotide amidot... 177 1e-43
ref|NP_477212.1| adenosine 2 CG9127-PA gi|24582109|ref|NP_723146... 110 2e-23
>gb|AAO23951.1| phosphoribosylformylglycinamidine synthase [Glycine max]
Length = 1313
Score = 207 bits (528), Expect = 7e-53
Identities = 86/97 (88%), Positives = 94/97 (96%)
Frame = -1
Query: 638 FPDKGVFERVAHSELAPLRYCDDAGHPTEGYPFHVNGSPLGIAAICSPDGRHLAMMPHPE 459
FPD+GV +R+ HSELAP+RYCDDAG+PTE YPF+VNGSPLG+AAICSPDGRHLAMMPHPE
Sbjct: 1217 FPDEGVLDRIVHSELAPIRYCDDAGNPTEAYPFNVNGSPLGVAAICSPDGRHLAMMPHPE 1276
Query: 458 RCFLMWQFPWYPKQWDVEKKGPSPWLRMFQNAREWCT 348
RCFLMWQFPWYPKQWDVEKKGPSPWLRMFQNAREWC+
Sbjct: 1277 RCFLMWQFPWYPKQWDVEKKGPSPWLRMFQNAREWCS 1313
>gb|AAL55431.1| formylglycinamide ribonucleotide amidotransferase [Vigna unguiculata]
Length = 1289
Score = 206 bits (523), Expect = 3e-52
Identities = 85/97 (87%), Positives = 93/97 (95%)
Frame = -1
Query: 638 FPDKGVFERVAHSELAPLRYCDDAGHPTEGYPFHVNGSPLGIAAICSPDGRHLAMMPHPE 459
FPD+GVF+R+ HSELAP+RYCDDAG+PTE YPF+VNGSPLG+AAICSPDGRHLAMMPHPE
Sbjct: 1193 FPDEGVFDRIVHSELAPVRYCDDAGNPTESYPFNVNGSPLGVAAICSPDGRHLAMMPHPE 1252
Query: 458 RCFLMWQFPWYPKQWDVEKKGPSPWLRMFQNAREWCT 348
RCFLMWQFPWYPK WDVEK GPSPWLRMFQNAREWC+
Sbjct: 1253 RCFLMWQFPWYPKHWDVEKNGPSPWLRMFQNAREWCS 1289
>ref|NP_177566.1| putative phosphoribosylformylglycinamidine synthase; protein id:
At1g74260.1 [Arabidopsis thaliana]
gi|12230525|sp|Q9M8D3|PUR4_ARATH Probable
phosphoribosylformylglycinamidine synthase, chloroplast
precursor (FGAM synthase) (FGAMS) (Formylglycinamide
ribotide amidotransferase) (FGARAT) (Formylglycinamide
ribotide synthetase) gi|25293857|pir||A96771 hypothetical
protein F1O17.7 [imported] - Arabidopsis thaliana
gi|12324901|gb|AAG52403.1|AC020579_5 putative
phosphoribosylformylglycinamidine synthase; 25509-29950
[Arabidopsis thaliana]
Length = 1387
Score = 185 bits (469), Expect = 5e-46
Identities = 77/95 (81%), Positives = 86/95 (90%)
Frame = -1
Query: 638 FPDKGVFERVAHSELAPLRYCDDAGHPTEGYPFHVNGSPLGIAAICSPDGRHLAMMPHPE 459
FPD+GV + + HS+LAPLRYCDD G+ TE YPF++NGSPLGIAAICSPDGRHLAMMPHPE
Sbjct: 1289 FPDEGVLDHMLHSDLAPLRYCDDDGNVTEAYPFNLNGSPLGIAAICSPDGRHLAMMPHPE 1348
Query: 458 RCFLMWQFPWYPKQWDVEKKGPSPWLRMFQNAREW 354
RCFLMWQFPWYP WDVEK GPSPWL+MFQNAR+W
Sbjct: 1349 RCFLMWQFPWYPTSWDVEKAGPSPWLKMFQNARDW 1383
>dbj|BAB92637.1| putative formylglycinamide ribonucleotide amidotransferase [Oryza
sativa (japonica cultivar-group)]
gi|21328066|dbj|BAC00651.1| putative formylglycinamide
ribonucleotide amidotransferase [Oryza sativa (japonica
cultivar-group)]
Length = 1354
Score = 177 bits (449), Expect = 1e-43
Identities = 74/96 (77%), Positives = 84/96 (87%)
Frame = -1
Query: 638 FPDKGVFERVAHSELAPLRYCDDAGHPTEGYPFHVNGSPLGIAAICSPDGRHLAMMPHPE 459
FPD+ V V +S LAP+RYCDDA + TE YPF+ NGSPLGIAA+CSPDGRHLAMMPHPE
Sbjct: 1258 FPDENVLASVVNSNLAPVRYCDDANNITEVYPFNPNGSPLGIAALCSPDGRHLAMMPHPE 1317
Query: 458 RCFLMWQFPWYPKQWDVEKKGPSPWLRMFQNAREWC 351
RCF+MWQ+PWYPK+W +EK GPSPWLRMFQNAREWC
Sbjct: 1318 RCFMMWQYPWYPKEWQLEKCGPSPWLRMFQNAREWC 1353
>ref|NP_477212.1| adenosine 2 CG9127-PA gi|24582109|ref|NP_723146.1| adenosine 2
CG9127-PB gi|24582111|ref|NP_723147.1| adenosine 2
CG9127-PC gi|12643275|sp|P35421|PUR4_DROME
Phosphoribosylformylglycinamidine synthase (FGAM
synthase) (FGAMS) (Formylglycinamide ribotide
amidotransferase) (FGARAT) (Formylglycinamide ribotide
synthetase) (Adenosine-2) gi|7297060|gb|AAF52329.1|
CG9127-PA [Drosophila melanogaster]
gi|22945730|gb|AAN10573.1| CG9127-PB [Drosophila
melanogaster] gi|22945731|gb|AAN10574.1| CG9127-PC
[Drosophila melanogaster]
Length = 1354
Score = 110 bits (274), Expect = 2e-23
Identities = 50/102 (49%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Frame = -1
Query: 638 FPDKGVFERVAHSELAPLRYCDDAGHPTEGYPFHVNGSPLGIAAICSPDGRHLAMMPHPE 459
F D+ + + +L L+Y DD G PTE YP + NGSP GIA +CS DGRHLA+MPHPE
Sbjct: 1253 FRDEKLISHLQSEQLVTLQYVDDVGKPTELYPLNPNGSPQGIAGLCSSDGRHLALMPHPE 1312
Query: 458 RCFLMWQFPWYPKQWDVE-KKGPSPWLRMFQNAREWCT*DDQ 336
RC M+Q+P+ P ++V + SPW MF NA WC +Q
Sbjct: 1313 RCSSMYQWPYVPSSFEVSPTQSESPWQIMFNNAYNWCVKSNQ 1354
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 548,110,034
Number of Sequences: 1393205
Number of extensions: 12396342
Number of successful extensions: 32611
Number of sequences better than 10.0: 166
Number of HSP's better than 10.0 without gapping: 31179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32499
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 26723359358
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
