Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC012793A_C01 KMC012793A_c01
(434 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_195176.1| putative serine/threonine protein kinase; prote... 67 7e-11
gb|AAN60996.1| Putative serine/threonine protein kinase [Oryza s... 62 1e-09
emb|CAD41006.1| OSJNBa0042L16.4 [Oryza sativa (japonica cultivar... 60 5e-09
ref|NP_171661.1| protein serine/threonine kinase, putative; prot... 59 1e-08
pir||A86146 hypothetical protein F22L4.8 - Arabidopsis thaliana ... 59 1e-08
>ref|NP_195176.1| putative serine/threonine protein kinase; protein id: At4g34500.1
[Arabidopsis thaliana] gi|7488207|pir||T05270 probable
serine/threonine-specific protein kinase (EC 2.7.1.-)
T4L20.80 - Arabidopsis thaliana
gi|3096919|emb|CAA18829.1| putative serine/threonine
protein kinase [Arabidopsis thaliana]
gi|7270400|emb|CAB80167.1| putative serine/threonine
protein kinase [Arabidopsis thaliana]
Length = 481
Score = 66.6 bits (161), Expect = 7e-11
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = -3
Query: 432 ALLVCLRCIDLDACKRPKMGQIVHMLEADDFPF 334
ALLVCLRCIDLD+ KRPKMGQI+HMLEA+DFPF
Sbjct: 393 ALLVCLRCIDLDSSKRPKMGQIIHMLEAEDFPF 425
>gb|AAN60996.1| Putative serine/threonine protein kinase [Oryza sativa (japonica
cultivar-group)]
Length = 467
Score = 62.4 bits (150), Expect = 1e-09
Identities = 29/36 (80%), Positives = 31/36 (85%)
Frame = -3
Query: 429 LLVCLRCIDLDACKRPKMGQIVHMLEADDFPFPSER 322
LLVCLRCID DA KRPKMGQIVHMLE D+FPF + R
Sbjct: 410 LLVCLRCIDSDAHKRPKMGQIVHMLEGDEFPFRTLR 445
>emb|CAD41006.1| OSJNBa0042L16.4 [Oryza sativa (japonica cultivar-group)]
Length = 526
Score = 60.5 bits (145), Expect = 5e-09
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = -3
Query: 432 ALLVCLRCIDLDACKRPKMGQIVHMLEADDFPFPSERRTNREKDDVPS 289
ALLV LRC+D +A KRPK+G ++HMLE DDFP+ ERR + V S
Sbjct: 441 ALLVALRCVDPEARKRPKIGHVIHMLEVDDFPYRDERRGGKAPGQVKS 488
>ref|NP_171661.1| protein serine/threonine kinase, putative; protein id: At1g01540.1,
supported by cDNA: gi_12083265, supported by cDNA:
gi_14194118, supported by cDNA: gi_20334727 [Arabidopsis
thaliana] gi|2505874|emb|CAA73303.1| putative kinase
[Arabidopsis thaliana]
gi|12083266|gb|AAG48792.1|AF332429_1 putative protein
serine/threonine kinase [Arabidopsis thaliana]
Length = 472
Score = 59.3 bits (142), Expect = 1e-08
Identities = 27/41 (65%), Positives = 32/41 (77%)
Frame = -3
Query: 429 LLVCLRCIDLDACKRPKMGQIVHMLEADDFPFPSERRTNRE 307
LLV LRC+D DA KRPKMG I+HMLEA+D + ERRT R+
Sbjct: 401 LLVALRCVDPDANKRPKMGHIIHMLEAEDLLYRDERRTTRD 441
>pir||A86146 hypothetical protein F22L4.8 - Arabidopsis thaliana
gi|8920590|gb|AAF81312.1|AC061957_8 Contains a strong
similarity to an unknown protein from Arabidopsis
thaliana gi|2505874 and contains an eukaryotic protein
kinase PF|00069 domain. ESTs gb|Z26473, gb|AI996016,
gb|Z17558, gb|N97089, gb|BE039500, gb|AA712856,
gb|Z26772 come from this gene
Length = 497
Score = 59.3 bits (142), Expect = 1e-08
Identities = 27/41 (65%), Positives = 32/41 (77%)
Frame = -3
Query: 429 LLVCLRCIDLDACKRPKMGQIVHMLEADDFPFPSERRTNRE 307
LLV LRC+D DA KRPKMG I+HMLEA+D + ERRT R+
Sbjct: 426 LLVALRCVDPDANKRPKMGHIIHMLEAEDLLYRDERRTTRD 466
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 357,733,075
Number of Sequences: 1393205
Number of extensions: 7252611
Number of successful extensions: 20073
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 19654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20067
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 6756111528
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
