Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC012483A_C01 KMC012483A_c01
(554 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_197712.1| serine carboxypeptidase II-like protein; protei... 212 3e-54
gb|AAG13597.1|AC051633_13 putative serine carboxypeptidase [Oryz... 169 3e-41
gb|AAG46107.1|AC073166_5 putative serine carboxypeptidase [Oryza... 169 3e-41
gb|AAM65698.1| putative serine carboxypeptidase II [Arabidopsis ... 157 6e-38
ref|NP_186860.1| putative serine carboxypeptidase II; protein id... 157 6e-38
>ref|NP_197712.1| serine carboxypeptidase II-like protein; protein id: At5g23210.1
[Arabidopsis thaliana] gi|10177810|dbj|BAB11176.1|
serine carboxypeptidase II-like protein [Arabidopsis
thaliana]
Length = 499
Score = 212 bits (539), Expect = 3e-54
Identities = 96/128 (75%), Positives = 110/128 (85%)
Frame = -2
Query: 553 NVTKIPYPWSHCSDNVSNFWNVAPQSTLPVIKKLIAGGLRVWVYSGDTDGRIPVTSTRYT 374
NVT I YPW+HCSD VS FW+ AP S LP ++ L++ GLRVWV+SGDTDGRIPVT+TRY+
Sbjct: 372 NVTNISYPWTHCSDTVS-FWSDAPASMLPTLRTLVSAGLRVWVFSGDTDGRIPVTATRYS 430
Query: 373 LKKLGLKIVEDWTPWYTSRQVGGWTVEYDGLTFVTIRGAGHQVPTFAPKQALQLIRHFLV 194
LKKLGLKIV+DWTPWYT QVGGWTVEYDGL FVT+RGAGHQVPTF P++ALQLI HFL
Sbjct: 431 LKKLGLKIVQDWTPWYTKLQVGGWTVEYDGLMFVTVRGAGHQVPTFKPREALQLIHHFLG 490
Query: 193 DKKLPPHP 170
+KKLP P
Sbjct: 491 NKKLPTFP 498
>gb|AAG13597.1|AC051633_13 putative serine carboxypeptidase [Oryza sativa]
Length = 437
Score = 169 bits (427), Expect = 3e-41
Identities = 72/124 (58%), Positives = 96/124 (77%)
Frame = -2
Query: 541 IPYPWSHCSDNVSNFWNVAPQSTLPVIKKLIAGGLRVWVYSGDTDGRIPVTSTRYTLKKL 362
IP +S C ++++ WN + + LP++KKL GLR+W+YSGDTD RIP TSTRYTLKKL
Sbjct: 313 IPGAYSLCHNSINRAWNDSDMTVLPIVKKLTQSGLRIWIYSGDTDARIPTTSTRYTLKKL 372
Query: 361 GLKIVEDWTPWYTSRQVGGWTVEYDGLTFVTIRGAGHQVPTFAPKQALQLIRHFLVDKKL 182
GL I EDW+PW+ +QVGGW+V +DGLTFVT+RGAGH VP+ P+QAL+L ++FL ++ L
Sbjct: 373 GLPIKEDWSPWFHHKQVGGWSVVFDGLTFVTVRGAGHMVPSIMPEQALELFKYFLANQNL 432
Query: 181 PPHP 170
P P
Sbjct: 433 PSKP 436
>gb|AAG46107.1|AC073166_5 putative serine carboxypeptidase [Oryza sativa]
Length = 482
Score = 169 bits (427), Expect = 3e-41
Identities = 72/124 (58%), Positives = 96/124 (77%)
Frame = -2
Query: 541 IPYPWSHCSDNVSNFWNVAPQSTLPVIKKLIAGGLRVWVYSGDTDGRIPVTSTRYTLKKL 362
IP +S C ++++ WN + + LP++KKL GLR+W+YSGDTD RIP TSTRYTLKKL
Sbjct: 358 IPGAYSLCHNSINRAWNDSDMTVLPIVKKLTQSGLRIWIYSGDTDARIPTTSTRYTLKKL 417
Query: 361 GLKIVEDWTPWYTSRQVGGWTVEYDGLTFVTIRGAGHQVPTFAPKQALQLIRHFLVDKKL 182
GL I EDW+PW+ +QVGGW+V +DGLTFVT+RGAGH VP+ P+QAL+L ++FL ++ L
Sbjct: 418 GLPIKEDWSPWFHHKQVGGWSVVFDGLTFVTVRGAGHMVPSIMPEQALELFKYFLANQNL 477
Query: 181 PPHP 170
P P
Sbjct: 478 PSKP 481
>gb|AAM65698.1| putative serine carboxypeptidase II [Arabidopsis thaliana]
Length = 471
Score = 157 bits (398), Expect = 6e-38
Identities = 67/125 (53%), Positives = 90/125 (71%)
Frame = -2
Query: 553 NVTKIPYPWSHCSDNVSNFWNVAPQSTLPVIKKLIAGGLRVWVYSGDTDGRIPVTSTRYT 374
N TKIPY W+ CS+ ++ WN + LP+ +++IAGG+RVWV+SGD D +PVT+TRY+
Sbjct: 345 NTTKIPYKWTACSEVLNRNWNDTDSTVLPIYREMIAGGIRVWVFSGDVDSVVPVTATRYS 404
Query: 373 LKKLGLKIVEDWTPWYTSRQVGGWTVEYDGLTFVTIRGAGHQVPTFAPKQALQLIRHFLV 194
L +L L W PWY +QVGGWT Y+GLTFVT+RGAGH+VP F P+ A +L ++FL
Sbjct: 405 LARLSLSTKLPWYPWYVKKQVGGWTEVYEGLTFVTVRGAGHEVPLFKPRAAFELFKYFLR 464
Query: 193 DKKLP 179
K LP
Sbjct: 465 GKPLP 469
>ref|NP_186860.1| putative serine carboxypeptidase II; protein id: At3g02110.1,
supported by cDNA: 42069., supported by cDNA:
gi_14335061 [Arabidopsis thaliana]
gi|6513922|gb|AAF14826.1|AC011664_8 putative serine
carboxypeptidase II [Arabidopsis thaliana]
gi|14335062|gb|AAK59795.1| AT3g02110/F1C9_10
[Arabidopsis thaliana] gi|27363308|gb|AAO11573.1|
At3g02110/F1C9_10 [Arabidopsis thaliana]
Length = 473
Score = 157 bits (398), Expect = 6e-38
Identities = 67/125 (53%), Positives = 90/125 (71%)
Frame = -2
Query: 553 NVTKIPYPWSHCSDNVSNFWNVAPQSTLPVIKKLIAGGLRVWVYSGDTDGRIPVTSTRYT 374
N TKIPY W+ CS+ ++ WN + LP+ +++IAGG+RVWV+SGD D +PVT+TRY+
Sbjct: 347 NTTKIPYKWTACSEVLNRNWNDTDSTVLPIYREMIAGGIRVWVFSGDVDSVVPVTATRYS 406
Query: 373 LKKLGLKIVEDWTPWYTSRQVGGWTVEYDGLTFVTIRGAGHQVPTFAPKQALQLIRHFLV 194
L +L L W PWY +QVGGWT Y+GLTFVT+RGAGH+VP F P+ A +L ++FL
Sbjct: 407 LARLSLSTKLPWYPWYVKKQVGGWTEVYEGLTFVTVRGAGHEVPLFKPRAAFELFKYFLR 466
Query: 193 DKKLP 179
K LP
Sbjct: 467 GKPLP 471
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 504,650,616
Number of Sequences: 1393205
Number of extensions: 11475937
Number of successful extensions: 29664
Number of sequences better than 10.0: 183
Number of HSP's better than 10.0 without gapping: 28902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29544
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19521267756
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
