Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC012399A_C01 KMC012399A_c01
(564 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF64040.1|AF228501_1 14-3-3-like protein [Glycine max] 112 4e-29
sp|P93214|1439_LYCES 14-3-3 protein 9 gi|22138738|emb|CAA67373.2... 107 5e-28
dbj|BAB68527.1| 14-3-3 protein [Nicotiana tabacum] 107 6e-28
gb|AAC15418.1| 14-3-3 protein homolog [Maackia amurensis] 106 6e-27
sp|P42654|143B_VICFA 14-3-3-LIKE PROTEIN B (VFA-1433B) gi|107654... 106 2e-26
>gb|AAF64040.1|AF228501_1 14-3-3-like protein [Glycine max]
Length = 263
Score = 112 bits (279), Expect(3) = 4e-29
Identities = 55/61 (90%), Positives = 57/61 (93%)
Frame = -2
Query: 563 AESELRRTHPIRLGLALNFSVFYYEIMNSPARACRLAKPAFDDAVSELDTLNEDSYKDST 384
AESEL+ THPIRLGLALNFSVFYYEI+NSP RAC LAK AFDDAVSELDTLNEDSYKDST
Sbjct: 163 AESELQPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDDAVSELDTLNEDSYKDST 222
Query: 383 L 381
L
Sbjct: 223 L 223
Score = 35.0 bits (79), Expect(3) = 4e-29
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = -1
Query: 354 LPLWTSDIPEDGDDPTTGKRSHWAGEGENELGR 256
L LWTSDIPE+G+D + +GE+ELGR
Sbjct: 232 LTLWTSDIPEEGEDLKMESAAR-VDQGEDELGR 263
Score = 22.7 bits (47), Expect(3) = 4e-29
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3
Query: 382 LIMQLLRDNL 353
LIMQLLRDNL
Sbjct: 223 LIMQLLRDNL 232
>sp|P93214|1439_LYCES 14-3-3 protein 9 gi|22138738|emb|CAA67373.2| 14-3-3 protein
[Lycopersicon esculentum]
Length = 261
Score = 107 bits (268), Expect(3) = 5e-28
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = -2
Query: 563 AESELRRTHPIRLGLALNFSVFYYEIMNSPARACRLAKPAFDDAVSELDTLNEDSYKDST 384
AE+EL THPIRLGLALNFSVFYYEIMNSP RAC LAK AFD+A+SELD+LNEDSYKDST
Sbjct: 162 AEAELAPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDSLNEDSYKDST 221
Query: 383 L 381
L
Sbjct: 222 L 222
Score = 35.8 bits (81), Expect(3) = 5e-28
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -1
Query: 354 LPLWTSDIPEDGDDPTTGKRSHWAGEGEN 268
L LWTSD+PED +D G ++ AG GE+
Sbjct: 231 LTLWTSDLPEDAEDAQKGDATNKAGGGED 259
Score = 22.7 bits (47), Expect(3) = 5e-28
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3
Query: 382 LIMQLLRDNL 353
LIMQLLRDNL
Sbjct: 222 LIMQLLRDNL 231
>dbj|BAB68527.1| 14-3-3 protein [Nicotiana tabacum]
Length = 261
Score = 107 bits (267), Expect(3) = 6e-28
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = -2
Query: 563 AESELRRTHPIRLGLALNFSVFYYEIMNSPARACRLAKPAFDDAVSELDTLNEDSYKDST 384
AE+EL THPIRLGLALNFSVFYYEIMNSP RAC LAK AFD+A+SELD+LNEDSYKDST
Sbjct: 162 AEAELPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDSLNEDSYKDST 221
Query: 383 L 381
L
Sbjct: 222 L 222
Score = 35.8 bits (81), Expect(3) = 6e-28
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -1
Query: 354 LPLWTSDIPEDGDDPTTGKRSHWAGEGEN 268
L LWTSD+PED +D G ++ AG GE+
Sbjct: 231 LTLWTSDLPEDAEDAQKGDATNKAGGGED 259
Score = 22.7 bits (47), Expect(3) = 6e-28
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3
Query: 382 LIMQLLRDNL 353
LIMQLLRDNL
Sbjct: 222 LIMQLLRDNL 231
>gb|AAC15418.1| 14-3-3 protein homolog [Maackia amurensis]
Length = 261
Score = 106 bits (264), Expect(3) = 6e-27
Identities = 51/61 (83%), Positives = 56/61 (91%)
Frame = -2
Query: 563 AESELRRTHPIRLGLALNFSVFYYEIMNSPARACRLAKPAFDDAVSELDTLNEDSYKDST 384
AE+EL THPIRLGLALNFSVFYYEI+NSP RAC LAK AFD+A+SELDTLNE+SYKDST
Sbjct: 162 AEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDST 221
Query: 383 L 381
L
Sbjct: 222 L 222
Score = 33.5 bits (75), Expect(3) = 6e-27
Identities = 15/29 (51%), Positives = 18/29 (61%)
Frame = -1
Query: 354 LPLWTSDIPEDGDDPTTGKRSHWAGEGEN 268
L LWTSDIPEDG+D + G GE+
Sbjct: 231 LTLWTSDIPEDGEDAQKANGTAKLGGGED 259
Score = 22.7 bits (47), Expect(3) = 6e-27
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3
Query: 382 LIMQLLRDNL 353
LIMQLLRDNL
Sbjct: 222 LIMQLLRDNL 231
>sp|P42654|143B_VICFA 14-3-3-LIKE PROTEIN B (VFA-1433B) gi|1076543|pir||S52900 14-3-3
protein homolog Vfa-1433b - fava bean
gi|695767|emb|CAA88416.1| 14-3-3 brain protein homolog
[Vicia faba]
Length = 261
Score = 106 bits (264), Expect(3) = 2e-26
Identities = 51/61 (83%), Positives = 56/61 (91%)
Frame = -2
Query: 563 AESELRRTHPIRLGLALNFSVFYYEIMNSPARACRLAKPAFDDAVSELDTLNEDSYKDST 384
AE+EL THPIRLGLALNFSVFYYEI+NSP RAC LAK AFD+A+SELDTLNE+SYKDST
Sbjct: 162 AEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDST 221
Query: 383 L 381
L
Sbjct: 222 L 222
Score = 32.0 bits (71), Expect(3) = 2e-26
Identities = 14/29 (48%), Positives = 18/29 (61%)
Frame = -1
Query: 354 LPLWTSDIPEDGDDPTTGKRSHWAGEGEN 268
L LWTSDIPEDG+D + G G++
Sbjct: 231 LTLWTSDIPEDGEDSQKANGTAKFGGGDD 259
Score = 22.7 bits (47), Expect(3) = 2e-26
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3
Query: 382 LIMQLLRDNL 353
LIMQLLRDNL
Sbjct: 222 LIMQLLRDNL 231
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 484,246,916
Number of Sequences: 1393205
Number of extensions: 10614044
Number of successful extensions: 31654
Number of sequences better than 10.0: 311
Number of HSP's better than 10.0 without gapping: 28513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31438
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20382500157
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
