Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC012378A_C01 KMC012378A_c01
(1061 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_200634.1| similar to unknown protein (pir||S75584); prote... 286 5e-76
dbj|BAB90365.1| B1065E10.16 [Oryza sativa (japonica cultivar-gro... 285 1e-75
ref|ZP_00074126.1| hypothetical protein [Trichodesmium erythraeu... 132 7e-30
gb|ZP_00106138.1| hypothetical protein [Nostoc punctiforme] 130 5e-29
ref|NP_488256.1| hypothetical protein [Nostoc sp. PCC 7120] gi|2... 129 1e-28
>ref|NP_200634.1| similar to unknown protein (pir||S75584); protein id: At5g58260.1,
supported by cDNA: 3488., supported by cDNA:
gi_19347862, supported by cDNA: gi_21280986 [Arabidopsis
thaliana] gi|8777327|dbj|BAA96917.1|
gene_id:MCK7.13~pir||S75584~similar to unknown protein
[Arabidopsis thaliana] gi|19347863|gb|AAL85990.1|
unknown protein [Arabidopsis thaliana]
gi|21280987|gb|AAM45047.1| unknown protein [Arabidopsis
thaliana]
Length = 209
Score = 286 bits (731), Expect = 5e-76
Identities = 139/207 (67%), Positives = 164/207 (79%), Gaps = 1/207 (0%)
Frame = -1
Query: 956 PTCFHVTKRQQQTRNNTIG-MMTGWGGRRHYETSKKDVVGVVRCSGVGLGDFIGGDLLKP 780
P CF + Q + T+G + +R T V+CS + D+IGGDL+KP
Sbjct: 13 PPCFEAS---QVKKIKTVGSFLVNTRSKRRRSTG-------VKCSSIA--DYIGGDLVKP 60
Query: 779 DLGRWLSDVEEHKALAIYSPHEGGYEGRYLSRLRRQGYYFLDLSARGLGDPETTLTKIHP 600
D+G+WL DVEEHKA+AIY+PHEGGYEGRYL+RL+ QGYYFLD+SARGLGDPETTL K +P
Sbjct: 61 DIGQWLQDVEEHKAIAIYAPHEGGYEGRYLNRLKMQGYYFLDISARGLGDPETTLLKNYP 120
Query: 599 VCPPHVGKQPIARWYFPPEVDYRLEALPPNAKGLVVCIIEAKVLSKAELQFLALLPTLRP 420
VCP H+GKQPIARWY+PPEVDYRL ALPP+AKGLVV ++EAKVLSK+ELQFLALLP+LRP
Sbjct: 121 VCPAHLGKQPIARWYYPPEVDYRLAALPPSAKGLVVWVLEAKVLSKSELQFLALLPSLRP 180
Query: 419 NVRVTAECGNWRKFMWKPLKEIAGLTA 339
NVRV AECGNWRKF+WKPL EIA L A
Sbjct: 181 NVRVIAECGNWRKFVWKPLAEIANLAA 207
>dbj|BAB90365.1| B1065E10.16 [Oryza sativa (japonica cultivar-group)]
Length = 211
Score = 285 bits (728), Expect = 1e-75
Identities = 130/158 (82%), Positives = 145/158 (91%)
Frame = -1
Query: 818 GLGDFIGGDLLKPDLGRWLSDVEEHKALAIYSPHEGGYEGRYLSRLRRQGYYFLDLSARG 639
GL DF+GGDL+KPD+GRWL DVE+HK+LAIY PHEGGYEGRYLSRL QGYYFLDLSARG
Sbjct: 46 GLWDFVGGDLVKPDMGRWLDDVEKHKSLAIYPPHEGGYEGRYLSRLSYQGYYFLDLSARG 105
Query: 638 LGDPETTLTKIHPVCPPHVGKQPIARWYFPPEVDYRLEALPPNAKGLVVCIIEAKVLSKA 459
LGDPETTLTKIHPVCPP +G+QP+ARWYFPPEVDYRL L P+AKGLVV ++EAKVLSKA
Sbjct: 106 LGDPETTLTKIHPVCPPSLGRQPVARWYFPPEVDYRLSLLHPDAKGLVVWVMEAKVLSKA 165
Query: 458 ELQFLALLPTLRPNVRVTAECGNWRKFMWKPLKEIAGL 345
ELQFLA+LP +RP VRV AECGNWRKF+WKPLK+IAGL
Sbjct: 166 ELQFLAILPDIRPKVRVIAECGNWRKFVWKPLKQIAGL 203
>ref|ZP_00074126.1| hypothetical protein [Trichodesmium erythraeum IMS101]
Length = 158
Score = 132 bits (333), Expect = 7e-30
Identities = 66/142 (46%), Positives = 91/142 (63%), Gaps = 7/142 (4%)
Frame = -1
Query: 764 LSDVEEHKALAIYSPHEGGYEGRYLSRLRRQGYYFLDLSARGLGDPETTLTKIHPVCPPH 585
+ D+E+ +LA+Y P EGG+EGRY RLR GY ++ARGLGD LT +H V PPH
Sbjct: 11 IRDLEKSGSLAVYPPLEGGFEGRYQRRLRASGYVSESITARGLGDLAMYLTGVHGVRPPH 70
Query: 584 VGKQPIAR-------WYFPPEVDYRLEALPPNAKGLVVCIIEAKVLSKAELQFLALLPTL 426
+GK+ + +Y PP V+Y+LE LPP AKGLV+ I+E ++LS E+++L +LP
Sbjct: 71 LGKKTVGNGPAVGYVYYVPPIVNYKLEHLPPKAKGLVLWIMEGQILSSQEIEYLTVLPKS 130
Query: 425 RPNVRVTAECGNWRKFMWKPLK 360
P V+V E G R F W PL+
Sbjct: 131 EPRVKVIVEMGGDRFFRWTPLQ 152
>gb|ZP_00106138.1| hypothetical protein [Nostoc punctiforme]
Length = 158
Score = 130 bits (326), Expect = 5e-29
Identities = 68/143 (47%), Positives = 88/143 (60%), Gaps = 7/143 (4%)
Frame = -1
Query: 764 LSDVEEHKALAIYSPHEGGYEGRYLSRLRRQGYYFLDLSARGLGDPETTLTKIHPVCPPH 585
+ D+E+ AL +Y P EGGYEGRY RLR GY L ++A+GLGD LT+IH V PPH
Sbjct: 11 IRDLEKFGALGVYVPLEGGYEGRYQRRLRAAGYTTLHITAKGLGDVAAYLTRIHGVRPPH 70
Query: 584 VGKQPIAR-------WYFPPEVDYRLEALPPNAKGLVVCIIEAKVLSKAELQFLALLPTL 426
+GK+ +Y PP +D LE LPP +KGLV+ IIE +LS EL++L LP L
Sbjct: 71 LGKKSTGSGAAVGQVYYLPPILDSHLEQLPPKSKGLVLWIIEGHILSNEELEYLTNLPQL 130
Query: 425 RPNVRVTAECGNWRKFMWKPLKE 357
P V+V E G R F W L++
Sbjct: 131 EPRVKVVIERGGDRAFRWTSLEK 153
>ref|NP_488256.1| hypothetical protein [Nostoc sp. PCC 7120] gi|25332975|pir||AI2332
hypothetical protein alr4216 [imported] - Nostoc sp.
(strain PCC 7120) gi|17133351|dbj|BAB75915.1|
ORF_ID:alr4216~hypothetical protein [Nostoc sp. PCC
7120]
Length = 162
Score = 129 bits (323), Expect = 1e-28
Identities = 67/143 (46%), Positives = 88/143 (60%), Gaps = 7/143 (4%)
Frame = -1
Query: 764 LSDVEEHKALAIYSPHEGGYEGRYLSRLRRQGYYFLDLSARGLGDPETTLTKIHPVCPPH 585
+ D+E+ ++ +Y P EGG+EGRY RLR GY L +ARGLGD LT +H V PPH
Sbjct: 11 IRDLEKFGSVGVYVPLEGGFEGRYRRRLRAAGYTTLQFTARGLGDVAAYLTGVHGVRPPH 70
Query: 584 VGKQPIAR-------WYFPPEVDYRLEALPPNAKGLVVCIIEAKVLSKAELQFLALLPTL 426
+GK+ +Y PP V +LE LPP +KGLV+ IIE +LS E++FL LP+L
Sbjct: 71 LGKKSSGNGAAVGNVYYLPPIVGSQLEHLPPKSKGLVLWIIEGHILSDQEVEFLTSLPSL 130
Query: 425 RPNVRVTAECGNWRKFMWKPLKE 357
P V+V E G R F WK LK+
Sbjct: 131 EPRVKVVVERGGDRTFRWKALKD 153
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 940,883,948
Number of Sequences: 1393205
Number of extensions: 22012931
Number of successful extensions: 72666
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 64362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72378
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 63188388383
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
