Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC012208A_C01 KMC012208A_c01
(664 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA75308.1| annexin [Medicago truncatula] gi|22859608|emb|CA... 183 2e-45
pir||S56674 annexin homolog RJ4 (clone RJ4) - garden strawberry ... 150 1e-35
sp|P51074|ANX4_FRAAN Annexin-like protein RJ4 gi|6010777|gb|AAF0... 150 1e-35
ref|NP_568271.2| annexin-like protein; protein id: At5g12380.1 [... 122 3e-27
emb|CAC42899.1| annexin-like protein [Arabidopsis thaliana] 122 3e-27
>emb|CAA75308.1| annexin [Medicago truncatula] gi|22859608|emb|CAD29698.1| annexin
[Medicago truncatula]
Length = 313
Score = 183 bits (465), Expect = 2e-45
Identities = 91/114 (79%), Positives = 102/114 (88%)
Frame = -3
Query: 662 IATFNRYREIHATSITKKLLDEKSDDFQKGLYTALRCFHDHIKYYEKVVRDAIQKSGTDE 483
IATFNRYRE H TSITKKLLDE SD+FQK LYT +R F+DH+KYYEKVVRDAI+K GTDE
Sbjct: 200 IATFNRYRETHGTSITKKLLDEGSDEFQKALYTTIRSFNDHVKYYEKVVRDAIKKVGTDE 259
Query: 482 DALTRVIVSRAEKDLKLISDVYYQRNSVHLEDAVAQEISGDYQKFLLTLLGKED 321
DALTRVIVSRA+ DLK+ISDVYY+RNSV LE VA+E SGDY+KFLLTLLGKE+
Sbjct: 260 DALTRVIVSRAQHDLKVISDVYYKRNSVLLEHVVAKETSGDYKKFLLTLLGKEE 313
>pir||S56674 annexin homolog RJ4 (clone RJ4) - garden strawberry (fragment)
gi|643076|gb|AAA79922.1| annexin
Length = 271
Score = 150 bits (380), Expect = 1e-35
Identities = 73/114 (64%), Positives = 97/114 (85%)
Frame = -3
Query: 662 IATFNRYREIHATSITKKLLDEKSDDFQKGLYTALRCFHDHIKYYEKVVRDAIQKSGTDE 483
+ATFN+YR+ SI+K LL+E ++DFQK L+TA+RC +D KY+EKV+R+AI++ GTDE
Sbjct: 158 MATFNKYRDDQGISISKNLLEEGANDFQKALHTAIRCLNDPKKYFEKVLRNAIKRVGTDE 217
Query: 482 DALTRVIVSRAEKDLKLISDVYYQRNSVHLEDAVAQEISGDYQKFLLTLLGKED 321
DALTRVIV+RAE+DL+ I +VYY++NSV LE AVA++ SGDY+ FLLTLLGKED
Sbjct: 218 DALTRVIVTRAERDLRDIKEVYYKKNSVPLEQAVAKDTSGDYKAFLLTLLGKED 271
>sp|P51074|ANX4_FRAAN Annexin-like protein RJ4 gi|6010777|gb|AAF01250.1| annexin
[Fragaria x ananassa]
Length = 314
Score = 150 bits (380), Expect = 1e-35
Identities = 73/114 (64%), Positives = 97/114 (85%)
Frame = -3
Query: 662 IATFNRYREIHATSITKKLLDEKSDDFQKGLYTALRCFHDHIKYYEKVVRDAIQKSGTDE 483
+ATFN+YR+ SI+K LL+E ++DFQK L+TA+RC +D KY+EKV+R+AI++ GTDE
Sbjct: 201 MATFNKYRDDQGISISKNLLEEGANDFQKALHTAIRCLNDPKKYFEKVLRNAIKRVGTDE 260
Query: 482 DALTRVIVSRAEKDLKLISDVYYQRNSVHLEDAVAQEISGDYQKFLLTLLGKED 321
DALTRVIV+RAE+DL+ I +VYY++NSV LE AVA++ SGDY+ FLLTLLGKED
Sbjct: 261 DALTRVIVTRAERDLRDIKEVYYKKNSVPLEQAVAKDTSGDYKAFLLTLLGKED 314
>ref|NP_568271.2| annexin-like protein; protein id: At5g12380.1 [Arabidopsis
thaliana]
Length = 316
Score = 122 bits (307), Expect = 3e-27
Identities = 59/110 (53%), Positives = 83/110 (74%)
Frame = -3
Query: 659 ATFNRYREIHATSITKKLLDEKSDDFQKGLYTALRCFHDHIKYYEKVVRDAIQKSGTDED 480
A FNRY++I+ TSITK LL+ ++++ L A+RC + +YY KV+R++I GTDED
Sbjct: 202 AIFNRYKDIYGTSITKDLLNHPTNEYLSALRAAIRCIKNPTRYYAKVLRNSINTVGTDED 261
Query: 479 ALTRVIVSRAEKDLKLISDVYYQRNSVHLEDAVAQEISGDYQKFLLTLLG 330
AL RVIV+RAEKDL I+ +Y++RN+V L+ A+A+E SGDY+ FLL LLG
Sbjct: 262 ALNRVIVTRAEKDLTNITGLYFKRNNVSLDQAIAKETSGDYKAFLLALLG 311
>emb|CAC42899.1| annexin-like protein [Arabidopsis thaliana]
Length = 257
Score = 122 bits (307), Expect = 3e-27
Identities = 59/110 (53%), Positives = 83/110 (74%)
Frame = -3
Query: 659 ATFNRYREIHATSITKKLLDEKSDDFQKGLYTALRCFHDHIKYYEKVVRDAIQKSGTDED 480
A FNRY++I+ TSITK LL+ ++++ L A+RC + +YY KV+R++I GTDED
Sbjct: 143 AIFNRYKDIYGTSITKDLLNHPTNEYLSALRAAIRCIKNPTRYYAKVLRNSINTVGTDED 202
Query: 479 ALTRVIVSRAEKDLKLISDVYYQRNSVHLEDAVAQEISGDYQKFLLTLLG 330
AL RVIV+RAEKDL I+ +Y++RN+V L+ A+A+E SGDY+ FLL LLG
Sbjct: 203 ALNRVIVTRAEKDLTNITGLYFKRNNVSLDQAIAKETSGDYKAFLLALLG 252
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 570,191,672
Number of Sequences: 1393205
Number of extensions: 12586691
Number of successful extensions: 32549
Number of sequences better than 10.0: 270
Number of HSP's better than 10.0 without gapping: 30781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32478
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 28572683052
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
